[Flexiblesusy-commits] [FlexibleSUSY/FlexibleSUSY] e16a11: need to use SARAH[OutputDirectory] in SARAH > 4.0....

GitHub noreply at github.com
Tue Jun 10 09:36:49 BST 2014


  Branch: refs/heads/master
  Home:   https://github.com/FlexibleSUSY/FlexibleSUSY
  Commit: e16a119d17d4adf61610fff038ff1d3fdaa21ac1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e16a119d17d4adf61610fff038ff1d3fdaa21ac1
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2013-12-01 (Sun, 01 Dec 2013)

  Changed paths:
    M templates/start.m.in

  Log Message:
  -----------
  need to use SARAH[OutputDirectory] in SARAH > 4.0.3


  Commit: f79f0d67ab9d48b745443f6905c72373ca101a9f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f79f0d67ab9d48b745443f6905c72373ca101a9f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-21 (Tue, 21 Jan 2014)

  Changed paths:
    M meta/WeinbergAngle.m

  Log Message:
  -----------
  disable Solve::ifun warning when calculating the Weinberg angle

The equation that we're trying to solve contains Sin[] and Cos[] of
the Weinberg angle.  Mathematica's Solve[] function will use the
inverse functions of Sin[] and Cos[] to solve the eq.  But since Sin[]
and Cos[] are invertible only on a finite interval, some solutions
will therefore not be found.  Therefore this warning will appear.

However, we're restricting us to the case where all gauge couplings
are positive and real, so some solutions are irrelevant anyway.
Furthermore we will restrict ourselfs to one solution.  Therefore it
is save to suppress this warning.


  Commit: 545adf3ca8dedc03311f2ac427d96679639d5f26
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/545adf3ca8dedc03311f2ac427d96679639d5f26
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M ChangeLog
    M configure
    M doc/chapters/output.tex
    M doc/flexiblesusy.tex

  Log Message:
  -----------
  Merge branch 'master' into development


  Commit: 7024b6ad41fc4f4040d105ae28925d2f4bb7bcaa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7024b6ad41fc4f4040d105ae28925d2f4bb7bcaa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M .gitignore
    A doc/bibliography.bib
    M doc/flexiblesusy.tex
    M doc/module.mk

  Log Message:
  -----------
  adding bibliography


  Commit: 5923dec43e7592120ab38c6354487826d21a5148
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5923dec43e7592120ab38c6354487826d21a5148
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M doc/flexiblesusy.tex

  Log Message:
  -----------
  adding extra space after the \MSbar and \DRbar macros


  Commit: e0e196d63b6b15e6e654c5e1ef40f542d9cdda4c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e0e196d63b6b15e6e654c5e1ef40f542d9cdda4c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M doc/chapters/output.tex

  Log Message:
  -----------
  adding numerical values for alpha_em and alpha_s


  Commit: 06611316e227dee598461d0f831d06ed72a5293f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/06611316e227dee598461d0f831d06ed72a5293f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M doc/flexiblesusy.tex

  Log Message:
  -----------
  adding more helper macros


  Commit: 7a7a47e9ceeba9cc247f2f8f003ea384b4b2b6cb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7a7a47e9ceeba9cc247f2f8f003ea384b4b2b6cb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M doc/bibliography.bib

  Log Message:
  -----------
  adding QCD papers for bottom and top quark masses


  Commit: 7a28bf61cf44e9e1c7dffb7c3b77aaeaefb7db03
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7a28bf61cf44e9e1c7dffb7c3b77aaeaefb7db03
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M doc/chapters/output.tex
    M doc/flexiblesusy.tex

  Log Message:
  -----------
  dumping low-energy mass formulas into the manual

Still missing:
 * formatting
 * what does "heavy" mean?


  Commit: 3d445b7677ac678b9f1f6fb9d0a631ff051dfe6d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3d445b7677ac678b9f1f6fb9d0a631ff051dfe6d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M doc/chapters/output.tex

  Log Message:
  -----------
  reformat a bit and explain user input and heavy self-energies


  Commit: bac614107cd1fcdb21782ff21b90602274bd5d0e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bac614107cd1fcdb21782ff21b90602274bd5d0e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-22 (Wed, 22 Jan 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  exclude test/ directory from Doxygen documentation


  Commit: 712edfbc8bfe79e3c29b3bc0a4c9ef66548736c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/712edfbc8bfe79e3c29b3bc0a4c9ef66548736c8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-23 (Thu, 23 Jan 2014)

  Changed paths:
    M .gitignore
    M configure
    A doc/mainpage.dox.in
    M doc/module.mk

  Log Message:
  -----------
  adding Doxygen mainpage file (still to be filled)


  Commit: 524324bfac655552c6e353d5d06f8bee833506dc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/524324bfac655552c6e353d5d06f8bee833506dc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-23 (Thu, 23 Jan 2014)

  Changed paths:
    M doc/mainpage.dox.in

  Log Message:
  -----------
  document directories


  Commit: 341646b10aa9aeed799151ba929a94ff4c37a839
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/341646b10aa9aeed799151ba929a94ff4c37a839
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-23 (Thu, 23 Jan 2014)

  Changed paths:
    M meta/WeinbergAngle.m

  Log Message:
  -----------
  using simpler SM definition of the Weinberg angle


  Commit: 806695199ade2ca9b1522fd781d0b284519445c0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/806695199ade2ca9b1522fd781d0b284519445c0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-23 (Thu, 23 Jan 2014)

  Changed paths:
    M meta/WeinbergAngle.m

  Log Message:
  -----------
  try the SM definition of the Weinberg angle first

This increases the probability that we do not need to call Solve[]
because the SM definition is correct in most models.  However, all of
this will fail in the UMSSM where the Higgs quantum numbers are not
fixed (=> there will only be a solution if the quantum numbers are
fixed to some non-anomalous values).


  Commit: 44b56602326d939d797e69bab20bd572318d9f55
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/44b56602326d939d797e69bab20bd572318d9f55
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-24 (Fri, 24 Jan 2014)

  Changed paths:
    M meta/WeinbergAngle.m

  Log Message:
  -----------
  print warning if SM-Weinberg angle does not solve eqs.

This might hint the user to bugs in the def. of the Weinberg angle.


  Commit: 31e7bf51c7045b8d907622c2313b91b9cf934d42
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/31e7bf51c7045b8d907622c2313b91b9cf934d42
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-24 (Fri, 24 Jan 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  point user to configure flags in case a library / package is missing


  Commit: f0f1fb3826190879251bdab5f6d240fe8cda60f7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f0f1fb3826190879251bdab5f6d240fe8cda60f7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-25 (Sat, 25 Jan 2014)

  Changed paths:
    M AUTHORS

  Log Message:
  -----------
  update Jae-hyeon's email address


  Commit: 0a02336f5612c3d64bc01dda3208135b913068a6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0a02336f5612c3d64bc01dda3208135b913068a6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-26 (Sun, 26 Jan 2014)

  Changed paths:
    M doc/chapters/quick_start.tex

  Log Message:
  -----------
  update the quick start section with the new ./createmodel interface


  Commit: 8de7d1ddfbf3c0614713945ee3c6e59e9a55e634
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8de7d1ddfbf3c0614713945ee3c6e59e9a55e634
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-26 (Sun, 26 Jan 2014)

  Changed paths:
    M doc/chapters/usage.tex

  Log Message:
  -----------
  write a workflow section and correcting ./createmodel usage


  Commit: 2f60423d3c6d716502f8c310f005eeef005b64d2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2f60423d3c6d716502f8c310f005eeef005b64d2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-26 (Sun, 26 Jan 2014)

  Changed paths:
    M doc/chapters/usage.tex
    M doc/flexiblesusy.tex

  Log Message:
  -----------
  add illustration of the workflow


  Commit: 683c910393056ab2f6e2c32a5f7a0b984adb1ca7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/683c910393056ab2f6e2c32a5f7a0b984adb1ca7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-26 (Sun, 26 Jan 2014)

  Changed paths:
    M doc/chapters/usage.tex

  Log Message:
  -----------
  remove sketched explanation of files and directories

It should go into the Output section


  Commit: 5e8a8b83ded802f2bf3a8b2cc88c23caff050224
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5e8a8b83ded802f2bf3a8b2cc88c23caff050224
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-27 (Mon, 27 Jan 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  store name of operating system in a variable


  Commit: c9a9c2a62e6cd8f45fcb3879c674e28606dc427d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c9a9c2a62e6cd8f45fcb3879c674e28606dc427d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-27 (Mon, 27 Jan 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  print help message in case the math kernel is not found

On Macs the Mathematica installation does not put a link to the math
kernel to /usr/local/bin/ .  I.e. we should tell the user where he
should search for the math kernel.


  Commit: e5c74dceb1c58fe5697b969c4a6f50b62380a692
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e5c74dceb1c58fe5697b969c4a6f50b62380a692
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-27 (Mon, 27 Jan 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  point the user to the configure option to specify the location of the math kernel


  Commit: bb3bc40f79872f225d966a82b544cfda8065f975
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bb3bc40f79872f225d966a82b544cfda8065f975
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-27 (Mon, 27 Jan 2014)

  Changed paths:
    M models/SoftsusyMSSM/mssm_parameter_point.hpp
    M models/SoftsusyMSSM/mssm_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/mssm_two_scale_convergence_tester.hpp
    M models/SoftsusyMSSM/mssm_two_scale_initial_guesser.cpp
    M models/SoftsusyMSSM/mssm_two_scale_initial_guesser.hpp
    M models/SoftsusyMSSM/mssm_two_scale_low_scale_constraint.cpp
    M models/SoftsusyMSSM/mssm_two_scale_low_scale_constraint.hpp
    M models/SoftsusyMSSM/mssm_two_scale_sugra_constraint.cpp
    M models/SoftsusyMSSM/mssm_two_scale_sugra_constraint.hpp
    M models/SoftsusyMSSM/mssm_two_scale_susy_scale_constraint.cpp
    M models/SoftsusyMSSM/mssm_two_scale_susy_scale_constraint.hpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_two_scale_mssm_initial_guesser.cpp
    M test/test_two_scale_mssm_solver.cpp

  Log Message:
  -----------
  renaming Softsusy MSSM classes to `SoftsusyMSSM_'


  Commit: 610e315b4415d80e54ea39bc27ba399233436308
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/610e315b4415d80e54ea39bc27ba399233436308
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-27 (Mon, 27 Jan 2014)

  Changed paths:
    M models/SoftsusyNMSSM/snmssm_parameter_point.hpp
    M models/SoftsusyNMSSM/snmssm_two_scale_convergence_tester.cpp
    M models/SoftsusyNMSSM/snmssm_two_scale_convergence_tester.hpp
    M models/SoftsusyNMSSM/snmssm_two_scale_initial_guesser.cpp
    M models/SoftsusyNMSSM/snmssm_two_scale_initial_guesser.hpp
    M models/SoftsusyNMSSM/snmssm_two_scale_low_scale_constraint.cpp
    M models/SoftsusyNMSSM/snmssm_two_scale_low_scale_constraint.hpp
    M models/SoftsusyNMSSM/snmssm_two_scale_sugra_constraint.cpp
    M models/SoftsusyNMSSM/snmssm_two_scale_sugra_constraint.hpp
    M models/SoftsusyNMSSM/snmssm_two_scale_susy_scale_constraint.cpp
    M models/SoftsusyNMSSM/snmssm_two_scale_susy_scale_constraint.hpp
    M test/test_NMSSM_high_scale_constraint.cpp
    M test/test_NMSSM_initial_guesser.cpp

  Log Message:
  -----------
  rename Softsusy NMSSM classes to `SNmssm_'


  Commit: f1ee1bb9e9c59062c30907b4e25306b010bfc346
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f1ee1bb9e9c59062c30907b4e25306b010bfc346
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-28 (Tue, 28 Jan 2014)

  Changed paths:
    R models/SoftsusyMSSM/mssm_solver.h
    A models/SoftsusyMSSM/mssm_solver.hpp
    M test/test_two_scale_mssm_solver.cpp

  Log Message:
  -----------
  renaming SoftsusyMSSM solver header file to .hpp


  Commit: 3a6679738c9f28dffffda2a7c4828b616591fa07
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3a6679738c9f28dffffda2a7c4828b616591fa07
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-28 (Tue, 28 Jan 2014)

  Changed paths:
    A models/SoftsusyMSSM/SoftsusyMSSM.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_parameter_point.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_solver.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale.cpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_initial_guesser.cpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_initial_guesser.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_low_scale_constraint.cpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_low_scale_constraint.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_sugra_constraint.cpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_sugra_constraint.hpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_susy_scale_constraint.cpp
    A models/SoftsusyMSSM/SoftsusyMSSM_two_scale_susy_scale_constraint.hpp
    M models/SoftsusyMSSM/module.mk
    R models/SoftsusyMSSM/mssm.hpp
    R models/SoftsusyMSSM/mssm_parameter_point.hpp
    R models/SoftsusyMSSM/mssm_solver.hpp
    R models/SoftsusyMSSM/mssm_two_scale.cpp
    R models/SoftsusyMSSM/mssm_two_scale.hpp
    R models/SoftsusyMSSM/mssm_two_scale_convergence_tester.cpp
    R models/SoftsusyMSSM/mssm_two_scale_convergence_tester.hpp
    R models/SoftsusyMSSM/mssm_two_scale_initial_guesser.cpp
    R models/SoftsusyMSSM/mssm_two_scale_initial_guesser.hpp
    R models/SoftsusyMSSM/mssm_two_scale_low_scale_constraint.cpp
    R models/SoftsusyMSSM/mssm_two_scale_low_scale_constraint.hpp
    R models/SoftsusyMSSM/mssm_two_scale_sugra_constraint.cpp
    R models/SoftsusyMSSM/mssm_two_scale_sugra_constraint.hpp
    R models/SoftsusyMSSM/mssm_two_scale_susy_scale_constraint.cpp
    R models/SoftsusyMSSM/mssm_two_scale_susy_scale_constraint.hpp

  Log Message:
  -----------
  renaming Softsusy MSSM files


  Commit: 3206e86400d5f3f9dfaf450603c9526055467a8e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3206e86400d5f3f9dfaf450603c9526055467a8e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-28 (Tue, 28 Jan 2014)

  Changed paths:
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_initial_guesser.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_initial_guesser.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_low_scale_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_low_scale_constraint.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_sugra_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_sugra_constraint.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_susy_scale_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_susy_scale_constraint.hpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_two_scale_mssm_initial_guesser.cpp
    M test/test_two_scale_mssm_solver.cpp

  Log Message:
  -----------
  renaming Softsusy's MSSM model files


  Commit: 60280a08ad8b77d8156f94ef4a738da0a6f23867
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/60280a08ad8b77d8156f94ef4a738da0a6f23867
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-28 (Tue, 28 Jan 2014)

  Changed paths:
    A models/SoftsusyNMSSM/SoftsusyNMSSM.hpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_parameter_point.hpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale.cpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale.hpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.cpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.hpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_initial_guesser.cpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_initial_guesser.hpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_low_scale_constraint.cpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_low_scale_constraint.hpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_sugra_constraint.cpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_sugra_constraint.hpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_susy_scale_constraint.cpp
    A models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_susy_scale_constraint.hpp
    M models/SoftsusyNMSSM/module.mk
    R models/SoftsusyNMSSM/snmssm.hpp
    R models/SoftsusyNMSSM/snmssm_parameter_point.hpp
    R models/SoftsusyNMSSM/snmssm_two_scale.cpp
    R models/SoftsusyNMSSM/snmssm_two_scale.hpp
    R models/SoftsusyNMSSM/snmssm_two_scale_convergence_tester.cpp
    R models/SoftsusyNMSSM/snmssm_two_scale_convergence_tester.hpp
    R models/SoftsusyNMSSM/snmssm_two_scale_initial_guesser.cpp
    R models/SoftsusyNMSSM/snmssm_two_scale_initial_guesser.hpp
    R models/SoftsusyNMSSM/snmssm_two_scale_low_scale_constraint.cpp
    R models/SoftsusyNMSSM/snmssm_two_scale_low_scale_constraint.hpp
    R models/SoftsusyNMSSM/snmssm_two_scale_sugra_constraint.cpp
    R models/SoftsusyNMSSM/snmssm_two_scale_sugra_constraint.hpp
    R models/SoftsusyNMSSM/snmssm_two_scale_susy_scale_constraint.cpp
    R models/SoftsusyNMSSM/snmssm_two_scale_susy_scale_constraint.hpp

  Log Message:
  -----------
  renaming Softsusy NMSSM model files


  Commit: 399a1c82eb6e6aef3b4be5c0548b4abe60faacfa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/399a1c82eb6e6aef3b4be5c0548b4abe60faacfa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-28 (Tue, 28 Jan 2014)

  Changed paths:
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_initial_guesser.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_initial_guesser.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_low_scale_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_low_scale_constraint.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_sugra_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_sugra_constraint.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_susy_scale_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_susy_scale_constraint.hpp
    M test/test_NMSSM_high_scale_constraint.cpp
    M test/test_NMSSM_initial_guesser.cpp

  Log Message:
  -----------
  renaming included files

Fixes #2


  Commit: bf70a1f9f56a10d9a19cc4fab2f8a422c3a22c4a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf70a1f9f56a10d9a19cc4fab2f8a422c3a22c4a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-28 (Tue, 28 Jan 2014)

  Changed paths:
    M models/SoftsusyMSSM/SoftsusyMSSM.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_initial_guesser.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_initial_guesser.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_low_scale_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_low_scale_constraint.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_sugra_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_sugra_constraint.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_susy_scale_constraint.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_susy_scale_constraint.hpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_two_scale_mssm_initial_guesser.cpp
    M test/test_two_scale_mssm_solver.cpp

  Log Message:
  -----------
  rename Mssm<Two_scale> to SoftsusyMSSM<Two_scale>


  Commit: 9e6df0d187bd30605d00e50e281468425ef05a51
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9e6df0d187bd30605d00e50e281468425ef05a51
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-01-28 (Tue, 28 Jan 2014)

  Changed paths:
    M models/SoftsusyNMSSM/SoftsusyNMSSM.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_initial_guesser.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_initial_guesser.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_low_scale_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_low_scale_constraint.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_sugra_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_sugra_constraint.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_susy_scale_constraint.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_susy_scale_constraint.hpp
    M test/test_NMSSM_high_scale_constraint.cpp
    M test/test_NMSSM_initial_guesser.cpp

  Log Message:
  -----------
  rename SNmssm to SoftsusyNMSSM


  Commit: fbc0b206f997ec2f28454bb381356333eae398fc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fbc0b206f997ec2f28454bb381356333eae398fc
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-02-05 (Wed, 05 Feb 2014)

  Changed paths:
    M templates/start.m.in

  Log Message:
  -----------
  Merge branch 'sarah-4.0.3b' into development

Conflicts:
	templates/start.m.in


  Commit: 52b47b610d731c0804b21c653c538df4db3667ab
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/52b47b610d731c0804b21c653c538df4db3667ab
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-02-05 (Wed, 05 Feb 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Require SARAH version 4.0.4 to make SARAH[OutputDirectory] work


  Commit: ec3ad1340b44fb3e5cf26efd41b242965d0fc80a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ec3ad1340b44fb3e5cf26efd41b242965d0fc80a
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-02-05 (Wed, 05 Feb 2014)

  Changed paths:
    M README
    M doc/chapters/overview.tex
    M doc/paper.tex

  Log Message:
  -----------
  increase required SARAH version to 4.0.4


  Commit: bb5de04203ff56c3492fcb178d495fd9e8c47fa4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bb5de04203ff56c3492fcb178d495fd9e8c47fa4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-05 (Wed, 05 Feb 2014)

  Changed paths:
    M models/SoftsusyMSSM/susy.cpp
    M models/SoftsusyNMSSM/nmssmsusy.cpp

  Log Message:
  -----------
  enable g^4 terms in gamma-hat because SARAH 4.0.4 support it


  Commit: 5f01ced67cf30df9bdbea52e9adfd1818adcb9c6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5f01ced67cf30df9bdbea52e9adfd1818adcb9c6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-18 (Tue, 18 Feb 2014)

  Changed paths:
    M createmodel

  Log Message:
  -----------
  improving user help message of the createmodel script


  Commit: cac0f9c86137bf78f68b62360244d8c5a43a1b69
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cac0f9c86137bf78f68b62360244d8c5a43a1b69
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-20 (Thu, 20 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  adding run-time comparison section


  Commit: b4360c4e2d414a64f182c84e78e423717babc704
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b4360c4e2d414a64f182c84e78e423717babc704
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-20 (Thu, 20 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  adding the CPU type to the table head


  Commit: 064d3272bf1aae962228e808d8ab3e3ea29ba344
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/064d3272bf1aae962228e808d8ab3e3ea29ba344
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove lattice and EFT sections


  Commit: 46664c1d0202929f40b321526a5ee49429f2781d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/46664c1d0202929f40b321526a5ee49429f2781d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  extend RGE section


  Commit: ea9fc4d9df87cbbcaf035a64dc579703614b6659
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea9fc4d9df87cbbcaf035a64dc579703614b6659
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  extend the boundary conditions section


  Commit: cddcfd6a179ca3bdecf481089778a9b787d6e002
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cddcfd6a179ca3bdecf481089778a9b787d6e002
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add dummy sections for the details of the low-scale constraint


  Commit: afcc2ed346b229c04f1b023f586c9259699dc3c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/afcc2ed346b229c04f1b023f586c9259699dc3c8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M doc/chapters/output.tex

  Log Message:
  -----------
  correcting MS-bar DR-bar conversion for the fermion masses

There is a bug in Softsusy and FlexibleSUSY!
See SLHA paper Eq. (19).


  Commit: cfc2562c993129d704f6a195ff336ba6fa5d33c1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cfc2562c993129d704f6a195ff336ba6fa5d33c1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M meta/LoopMasses.m
    M models/SoftsusyMSSM/softsusy.cpp
    M test/test_MSSM_low_scale_constraint.cpp
    M test/test_NMSSM_low_scale_constraint.cpp

  Log Message:
  -----------
  Correcting MS-bar DR-bar conversion of fermion masses


  Commit: 7cba3ac6a23c9a53c23f3c59d8ea00062742df99
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7cba3ac6a23c9a53c23f3c59d8ea00062742df99
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  updating ChangeLog


  Commit: 936ecf38893d8271d3592b31763eb1d88ba11c9c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/936ecf38893d8271d3592b31763eb1d88ba11c9c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M doc/bibliography.bib

  Log Message:
  -----------
  adding references for SLHA 1 and 2


  Commit: 28f0bb242ac4bb9e54512859633bd9636970eb5e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/28f0bb242ac4bb9e54512859633bd9636970eb5e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-21 (Fri, 21 Feb 2014)

  Changed paths:
    M doc/chapters/output.tex

  Log Message:
  -----------
  adding reference to the used MS-bar DR-bar conversion of mb and mtau


  Commit: b172c3ddeda26dabe43951dcb0cc09f7bb29dee7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b172c3ddeda26dabe43951dcb0cc09f7bb29dee7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-22 (Sat, 22 Feb 2014)

  Changed paths:
    M doc/chapters/output.tex

  Log Message:
  -----------
  correcting eq. for y_e


  Commit: d9a93bc1b3ee126bfe47cb41b60b470634aa0d42
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d9a93bc1b3ee126bfe47cb41b60b470634aa0d42
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-22 (Sat, 22 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  adding eqs. to calculate the Yukawa couplings y_f(MZ)


  Commit: 0317214ee27b64a9fba722c4f03a4b49df67fba1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0317214ee27b64a9fba722c4f03a4b49df67fba1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-23 (Sun, 23 Feb 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  correcting function documentation


  Commit: 34d33906e4cb0cd690e394a780e335dc5591d6b9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/34d33906e4cb0cd690e394a780e335dc5591d6b9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-27 (Thu, 27 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  sketching the meta code section in the paper


  Commit: ceecc4a3094c480a273461d674eb7390a4497ef1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ceecc4a3094c480a273461d674eb7390a4497ef1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-27 (Thu, 27 Feb 2014)

  Changed paths:
    M slhaea/slhaea.h

  Log Message:
  -----------
  Bugfix: compilation error with Intel icpc 14.0, Build 20130728

The following combinations of compilers and STL implementations now
work:

    clang++ 3.4 + STL 4.8.1
    icpc 14.0 + STL 4.6.4 or 4.8.1
    g++ 4.6.4 + STL 4.6.4
    g++ 4.7.2 + STL 4.7.2
    g++ 4.8.1 + STL 4.8.1

Patch: Jae-hyeon


  Commit: a6496a08f1641002b80f7adb3dd7b6af771301ba
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a6496a08f1641002b80f7adb3dd7b6af771301ba
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-27 (Thu, 27 Feb 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  updating ChangeLog


  Commit: f4cb17a1e0f5807a9af1bb32a93ff0eaa5824791
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f4cb17a1e0f5807a9af1bb32a93ff0eaa5824791
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-28 (Fri, 28 Feb 2014)

  Changed paths:
    M configure
    A examples/standalone/Makefile.in
    A examples/standalone/standalone.cpp

  Log Message:
  -----------
  adding standalone example


  Commit: c2da837a5dac2912efe07dcf21f008c82dfdc82f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c2da837a5dac2912efe07dcf21f008c82dfdc82f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-28 (Fri, 28 Feb 2014)

  Changed paths:
    M test/module.mk
    A test/test_standalone.sh

  Log Message:
  -----------
  adding test for the standalone example

The test checks if the standalone/ directory can be copied and does
still compile (assumin that ./configure was run before and libMSSM was
created).


  Commit: 616f9281b9a4e8c79cbafb5f5b349bb71e396da1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/616f9281b9a4e8c79cbafb5f5b349bb71e396da1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-02-28 (Fri, 28 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  adding diagonalization conventions


  Commit: da477b4728cf8a2e10f8c30b07255a31631845e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/da477b4728cf8a2e10f8c30b07255a31631845e6
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-02-28 (Fri, 28 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Fixing a typo in convention of symmetric diagonalization


  Commit: daeab628d0d269222c28c07eee99837e4f9b773e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/daeab628d0d269222c28c07eee99837e4f9b773e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-02-28 (Fri, 28 Feb 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Clarifying uses of diagonalization routines


  Commit: da59b565283c1bab4999c196b02553d507589408
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/da59b565283c1bab4999c196b02553d507589408
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M examples/standalone/Makefile.in

  Log Message:
  -----------
  including . as first directory to enable local overwriting of headers


  Commit: a432df2bed9f8ee7bcc57b22c878eb0652de9bb4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a432df2bed9f8ee7bcc57b22c878eb0652de9bb4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M examples/standalone/Makefile.in

  Log Message:
  -----------
  per convention distclean should remove the generated Makefile


  Commit: 8e2fd8c94ae37f7b4119fcf41e19cd56a7d70920
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8e2fd8c94ae37f7b4119fcf41e19cd56a7d70920
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M examples/standalone/Makefile.in

  Log Message:
  -----------
  removing .d on `make clean'


  Commit: 7765c35e85c9ff680d1ba8f5926ad2534b6ec10d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7765c35e85c9ff680d1ba8f5926ad2534b6ec10d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M examples/module.mk

  Log Message:
  -----------
  run `make distclean' in standalone/ sub-directory

Since the Makefile in the standalone/ sub-directory is not integrated
into the makefile module tree, we need to cd into the standalone/
sub-directory and run `make distclean' separately.

Note: standalone/Makefile is not included in the makefile module tree
by intention!  We want to provide a completely independent sub-package
with it's own Makefile.


  Commit: 777df0cd648984a087dda2c0c3d621bfbe977bd3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/777df0cd648984a087dda2c0c3d621bfbe977bd3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  point the user to the configure options for LoopTools headers and libs


  Commit: 96abcc4997e068c29cabd4a6546fa9ace95448fc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/96abcc4997e068c29cabd4a6546fa9ace95448fc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  make more variables local


  Commit: 84dc991c1f3535b5b30f8fe4e4b9c486c8ccff5e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/84dc991c1f3535b5b30f8fe4e4b9c486c8ccff5e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  updating ChangeLog


  Commit: db60205cdccc21eae952743f92ba547e4c471326
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/db60205cdccc21eae952743f92ba547e4c471326
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M test/module.mk

  Log Message:
  -----------
  Bugfix: need to link LoopTools libs against test_MSSM_NMSSM_linking.x


  Commit: 0ff196b41211ce7710a2583fa1092849af522193
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0ff196b41211ce7710a2583fa1092849af522193
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  updating ChangeLog


  Commit: 9a5f0a3bd64529cc23fa6423fd02f03eb108bd5b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9a5f0a3bd64529cc23fa6423fd02f03eb108bd5b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-01 (Sat, 01 Mar 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  describe the three differend diagonalization methods (pole masses)


  Commit: 37cb411d67f6fd97c8fc07718b91fc423c179f23
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37cb411d67f6fd97c8fc07718b91fc423c179f23
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-02 (Sun, 02 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  updating ChangeLog


  Commit: b9776906e549c6452bd5ffcb6e7d65150910108f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b9776906e549c6452bd5ffcb6e7d65150910108f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-02 (Sun, 02 Mar 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  sketch two-scale algorithm in Figure 2


  Commit: 949490674a78115f92be0f9f07b9bde331646ef2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/949490674a78115f92be0f9f07b9bde331646ef2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-02 (Sun, 02 Mar 2014)

  Changed paths:
    M examples/standalone/standalone.cpp

  Log Message:
  -----------
  make standalone RGE example more sophisticated

It now uses the soft parameters as well, for illustration.


  Commit: 6b979184ed74cf1fd905f9b9ee54c5d5489ef859
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6b979184ed74cf1fd905f9b9ee54c5d5489ef859
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-02 (Sun, 02 Mar 2014)

  Changed paths:
    M examples/standalone/standalone.cpp

  Log Message:
  -----------
  adding example self-energy calculation


  Commit: 8408ea9febe8642703b63474832addde69710af7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8408ea9febe8642703b63474832addde69710af7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-03 (Mon, 03 Mar 2014)

  Changed paths:
    A config/Makefile.standalone.in
    M configure
    R examples/standalone/Makefile.in

  Log Message:
  -----------
  move standalone Makefile template to config/ directory


  Commit: ff132258c14819e5a322df0e7b1191b09f57c9d3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ff132258c14819e5a322df0e7b1191b09f57c9d3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-03 (Mon, 03 Mar 2014)

  Changed paths:
    M configure
    M examples/module.mk
    A examples/standalone-model/standalone.cpp
    A examples/standalone-rge/standalone.cpp
    R examples/standalone/standalone.cpp
    M test/test_standalone.sh

  Log Message:
  -----------
  putting the two standalone examples into separate directories


  Commit: b7d2f271e390a4a27e07dda508f25036de7bf3db
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b7d2f271e390a4a27e07dda508f25036de7bf3db
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-03 (Mon, 03 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  print model names to the configure output


  Commit: 76f600c4360044e86dc677d28b72066e1e16a1d2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/76f600c4360044e86dc677d28b72066e1e16a1d2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-03 (Mon, 03 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  updating ChangeLog


  Commit: 9aac3264d274f2c23da118abcfb065bf8ce6a595
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9aac3264d274f2c23da118abcfb065bf8ce6a595
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-03 (Mon, 03 Mar 2014)

  Changed paths:
    M ChangeLog
    A config/Makefile.standalone.in
    M configure
    M examples/module.mk
    A examples/standalone-model/standalone.cpp
    A examples/standalone-rge/standalone.cpp
    M test/module.mk
    A test/test_standalone.sh

  Log Message:
  -----------
  Merge branch 'feature-standalone' into development

Conflicts:
	ChangeLog


  Commit: 15a38bdf62a21a7b2c2b75e66e959dc009149fc3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/15a38bdf62a21a7b2c2b75e66e959dc009149fc3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-03 (Mon, 03 Mar 2014)

  Changed paths:
    M AUTHORS

  Log Message:
  -----------
  remove < and > from e-mail addresses


  Commit: 8fc7197248b4cd260c432980b6bfc226b8d897da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8fc7197248b4cd260c432980b6bfc226b8d897da
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  adding Sign() helper function


  Commit: dcb6663cde75a49ff1aa4cc370334819e81e7206
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dcb6663cde75a49ff1aa4cc370334819e81e7206
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M src/module.mk
    A src/mssm_helpers.cpp
    A src/mssm_helpers.hpp
    M test/module.mk
    A test/test_mssm_helpers.cpp

  Log Message:
  -----------
  adding MSSM helper function to determine m_stop1 and m_stop2


  Commit: e8fd3d244770405b0ab9361c5011c04983999009
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e8fd3d244770405b0ab9361c5011c04983999009
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/SelfEnergies.m
    M model_files/MSSM/FlexibleSUSY.m.in
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  adding two-loop tadpoles to GSL array (if enabled)


  Commit: 832c4804db535a88d088f5ad526408291b224298
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/832c4804db535a88d088f5ad526408291b224298
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/SelfEnergies.m
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  adding empty two-loop tadpole functions to the model class

(if enabled)


  Commit: 13664aa175bfa07e7c537ea8026d6cdb095ce4e2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/13664aa175bfa07e7c537ea8026d6cdb095ce4e2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M test/test_mssm_helpers.cpp

  Log Message:
  -----------
  adding test for the sneutino mass


  Commit: e4be1d93806ea4f3edeceb1a5af81ad5da352a15
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e4be1d93806ea4f3edeceb1a5af81ad5da352a15
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/SelfEnergies.m

  Log Message:
  -----------
  start adding two-loop tadpole corrections


  Commit: 5a4a532f5c57669aeb4347878b59f478c49362fc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5a4a532f5c57669aeb4347878b59f478c49362fc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/TreeMasses.m
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  adding empty helper functions for 3rd generation fermions


  Commit: 08179c713edb7ddc616aec40c80561d81aaf5e34
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/08179c713edb7ddc616aec40c80561d81aaf5e34
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M meta/TreeMasses.m
    M templates/two_scale_model.cpp.in
    M test/test_mssm_helpers.cpp

  Log Message:
  -----------
  adding 3rd generation sfermion mass helper functions to the model class


  Commit: 70dbab28be290d5943d6d4d94e14d13d5d595077
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/70dbab28be290d5943d6d4d94e14d13d5d595077
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  include two-loop headers only when needed


  Commit: ef1c23029e06d56303136848bb5cca82dc8072b8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ef1c23029e06d56303136848bb5cca82dc8072b8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  use isnan instead of self-defined function


  Commit: fbb328647236b327c0e5150fb10ecd1304633c6f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fbb328647236b327c0e5150fb10ecd1304633c6f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-04 (Tue, 04 Mar 2014)

  Changed paths:
    M examples/run_softpoint.h
    M meta/FlexibleSUSY.m
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyMSSM/softsusy.h
    R models/SoftsusyMSSM/twoloophiggs.f
    R models/SoftsusyMSSM/twoloophiggs.h
    M src/module.mk
    A src/mssm_twoloophiggs.f
    A src/mssm_twoloophiggs.h

  Log Message:
  -----------
  move MSSM two-loop Higgs module to src/

This allows any model to use these MSSM two-loop corrections.


  Commit: ce0efb7bdeea5786b6411e0accc53ff85bcf940b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ce0efb7bdeea5786b6411e0accc53ff85bcf940b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M meta/TreeMasses.m

  Log Message:
  -----------
  calculate 3rd generation sfermion masses for the two-loop tadpoles


  Commit: e3e63cea371b2093ffde9aaf09b9f0fb09a9e3dd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e3e63cea371b2093ffde9aaf09b9f0fb09a9e3dd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M src/mssm_helpers.cpp
    M test/test_MSSM_model.cpp
    M test/test_mssm_helpers.cpp

  Log Message:
  -----------
  adding tests for the two-loop MSSM tadpoles


  Commit: 41bae3ff62832edc45d1f6a451a455e2fb39690f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/41bae3ff62832edc45d1f6a451a455e2fb39690f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  normalize two-loop tadpoles in the FS convention


  Commit: 6f134b6bffbec22315d77184d1dfff0ebd390e05
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6f134b6bffbec22315d77184d1dfff0ebd390e05
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/SelfEnergies.m
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  adding two-loop self-energy function for the MSSM Higgs


  Commit: 75667ec832fe7f7888e6bd351101835814ce54df
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/75667ec832fe7f7888e6bd351101835814ce54df
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  correcting sign of two-loop tadpoles


  Commit: e820fd9e1de487ccd8f7e0fc30e0ab245330d4e8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e820fd9e1de487ccd8f7e0fc30e0ab245330d4e8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  adding two-loop Higgs self-energy contributions


  Commit: a759c2f8ab40955de0df7fc3a67659eb8c7bbdd5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a759c2f8ab40955de0df7fc3a67659eb8c7bbdd5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M test/test_MSSM.hpp
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  generalize n-loop EWSB functions


  Commit: 22d51cd6d2de5bdb6aeec455af53c024e253befe
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/22d51cd6d2de5bdb6aeec455af53c024e253befe
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M model_files/MSSM/LesHouches.in.MSSM
    M test/test_MSSM.hpp
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  adding two-loop Higgs mass tests


  Commit: a3b2c53fab93ae4409f2f80bb1f8741e785a7bbc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a3b2c53fab93ae4409f2f80bb1f8741e785a7bbc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M doc/paper.tex
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/lowMSSM/LesHouches.in.lowMSSM

  Log Message:
  -----------
  improve SLHA input file option documentation


  Commit: cda31620f9eadec5ebebbcaecb72fcbed7c58571
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cda31620f9eadec5ebebbcaecb72fcbed7c58571
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M model_files/MSSM/LesHouches.in.MSSM

  Log Message:
  -----------
  use two-loop Higgs mass corrections in the MSSM by default


  Commit: f58e2b3c8238cc05c571a4fe08164183e6e12cb9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f58e2b3c8238cc05c571a4fe08164183e6e12cb9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: bd23f0b89f5d03b469c8b3288865f529aec4d885
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bd23f0b89f5d03b469c8b3288865f529aec4d885
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M meta/Vertices.m

  Log Message:
  -----------
  Bugfix: fix color factor resolution

When resolving a color factor multiplying a vertex,
SARAH`sumOverNonAbelianIndizes[] sums over internal color indices only
if there are two rotated fields and two unrotated fields coupling
together.  ResolveColorFactor[] in Vertices.m now checks for this
condition to reproduce the result by SARAH.


  Commit: d0e449fa7bfd67b1fe9975e46464a10f7ea8ed02
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d0e449fa7bfd67b1fe9975e46464a10f7ea8ed02
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M meta/Vertices.m

  Log Message:
  -----------
  Do not hard code internal color index range

ResolveColorFactor[] in Vertices.m obtains the range of an internal
color index from SARAH`Particles.  For a color octet running in the
loop for instance, the range now becomes from 1 to 8 instead of from 1
to 3 which used to be hard coded.  However, this introduces a
discrepancy between FlexiSUSY and SARAH in the coupling Cp[USd[{gO1}],
conj[USd[{gO2}]], conj[SOc], SOc] which is generated in MRSSM.  The
reason is that a color index in SARAH`sumOverNonAbelianIndizes[] is
always from 1 to 3, returned by SARAH`getIndexRange[].  This issue
needs to be resolved.


  Commit: cab7cc5ed30f6c649122a242c897eef23366fe6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cab7cc5ed30f6c649122a242c897eef23366fe6e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-05 (Wed, 05 Mar 2014)

  Changed paths:
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  enabling two-loop Higgs corrections in all MSSM-like models


  Commit: 8cce146e4b25c2331f69a07b79073a5b99f1b0e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8cce146e4b25c2331f69a07b79073a5b99f1b0e6
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-06 (Thu, 06 Mar 2014)

  Changed paths:
    M meta/Vertices.m

  Log Message:
  -----------
  meta/Vertices.m: simplify color index range lookup


  Commit: 838477d13067e57c027684c9a4a3bc12d2818f8f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/838477d13067e57c027684c9a4a3bc12d2818f8f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M meta/LoopMasses.m
    M meta/Parameters.m
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  remove loop-level indicator from pole mass function name

The reason is that the pole mass functions might add higher order
corrections.


  Commit: fb82ba367bbbfba642833acc58b842030ad2bf6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fb82ba367bbbfba642833acc58b842030ad2bf6e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M meta/LoopMasses.m
    M templates/two_scale_low_scale_constraint.cpp.in
    M test/test_MSSM_low_scale_constraint.cpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_low_scale_constraint.cpp

  Log Message:
  -----------
  removing loop-level indicator from DRbar mass function


  Commit: 54108aaeb848bee67799f87dbf5485981fd5af80
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/54108aaeb848bee67799f87dbf5485981fd5af80
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  generalize CP-even Higgs pole-mass iteration function


  Commit: 05a49090b5923997c822c89da295df72f0b94282
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/05a49090b5923997c822c89da295df72f0b94282
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  correcting size of result array for 2-loop MSSM tadpoles


  Commit: 1c28ef57a82412f027061b55e46e3aafba2a4b87
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1c28ef57a82412f027061b55e46e3aafba2a4b87
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  adding two-loop dMA contributions to the CP-even Higgs self-energy

Note: dMA contains also two-loop tadpole contributions, which we
cancel out.

On 08.03.2014 02:40, Peter Athron wrote:

Please see http://arxiv.org/pdf/hep-ph/0105096v2.pdf Eqns 3-9. Here
you see how the double derrivatives of the psedouscalar states can
appear in the expressions of the cp even self energies.

Now look at eqn 24.  here is the *definition* of DeltaM_S^2. Slavich
presents his results as elements of DeltaM_S^2 and this is what you
get from his twoloophiggs.f.  The same is true for the yukawa
corrections in http://arxiv.org/pdf/hep-ph/0305127v3.pdf (see eqns
6-10) and the corresponding routines in twoloophiggs.f. He is *not*
simply giving double derivatives or self energies.

The essential point is that he has written his expressions such that
they are to be added on to expressions including the pole mA.  However
as we discussed yesterday Ben uses the DR-bar mAsq in the CP even self
energy and so he must correct for this.  that is what the dMA pieces
do.

Now Ben only adds one loop tadpoles.  This should be because when he
adds the dMA pieces, they are not just the double derivatives of the
pseudoscalar states which we want to cancel(in e.g eqn 10 of
hep-ph/0305127) , but also include the tadpole corrections. dMA is the
two loop corrections to take the DRbar psuedoscalar mass ( =
-2m3sq/sin(2beta)) to the pole mass (as in eqn 8 of hep-ph/0305127)
and thus contains two loop tadpoles.

Therefore if you simply use our current approach where the twoloop
tadpoles are included in the T_i/v_i but add the two loop corrections
and dMA pieces as in softsusy then I believe you will be double
counting the tadpoles!  But you also cannot simply ignore the dMA
pieces and just uses DeltaMS^2 as you would then be including double
derivatives of psuedoscalar states!


  Commit: d7845f3d8042dfdd0715c168f6c0f0d2484f1651
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d7845f3d8042dfdd0715c168f6c0f0d2484f1651
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  increase test precision for the CP-even MSSM Higgses


  Commit: a0081674ad7e4d7d29b250d0fc99d74be5a488a1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a0081674ad7e4d7d29b250d0fc99d74be5a488a1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  reformulate ChangeLog entry


  Commit: cf0b9a801593ba62310556e9a641163b3a87ab62
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cf0b9a801593ba62310556e9a641163b3a87ab62
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/SelfEnergies.m
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  adding MSSM two-loop self-energy corrections to the CP-odd Higgs


  Commit: e63d15fb45a1f00c1e1a86ebbcd575e8810ad49e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e63d15fb45a1f00c1e1a86ebbcd575e8810ad49e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: a2d225e56a6a0a19b7bc34a774482e4a6a707b29
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a2d225e56a6a0a19b7bc34a774482e4a6a707b29
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M models/SoftsusyMSSM/softsusy.cpp

  Log Message:
  -----------
  merge upstream changes on the calculation of mHpm (two-loop)


  Commit: d35d51b1c125a10a6d1ec613b99bfce90b17bac3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d35d51b1c125a10a6d1ec613b99bfce90b17bac3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  check equality of soft Higgs masses


  Commit: 61665481414a121b4daeb117114e51a86708196e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/61665481414a121b4daeb117114e51a86708196e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-09 (Sun, 09 Mar 2014)

  Changed paths:
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  renaming functions and add initial conditions for the higgs iteration


  Commit: 901c66a6f21a55b49e23cd8553a12d76055a2e7e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/901c66a6f21a55b49e23cd8553a12d76055a2e7e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  correcting self-energy contribution to CP-odd MSSM Higgs

The dMA pieces need to be added to the self-energy matrix in the form
of Eq. (9) hep-ph/0105096 .  dMA contains tadpole contributions (in
form of bA = sb^2 t1/v1 + cb^2 t2/v2, see hep-ph/9606211), which we
need to subtract.

On 10.03.2014 04:42, Peter Athron wrote:

Ben's expression for poleMasq is just BPMZ eqn E6 with the two loop
added on.  Now E6 is the most overly convoluted expression in the
history of the universe.  To get this they start off with the DR-bar
expression for mAsq after EWSB substitution, ie -m3sq/(sb*cb) and add
the one loop self energy, PiAA and the tadpoles, bA (this is what we
need to know).  They then substitute for the DRbar part using first
the one loop EWSB equations (E1 and E2 with T1 and T2 appropriately
set) and then substitute for the musq which appears using the one loop
expression for musq in E6.

The important point though is all they are really doing is adding
Pi_AA and bA to the DRbar mass.  bA takes the form it does because of
the rotation from the gauge basis to the mass eigenstates where there
is only one non-zero mass.

At two loop dMA correction contains both the two loop bA (rotated
tadpoles) and the two loop PiAA self energy (or rotated Pi_P_iP_j if
you prefer).

Now if you look at http://arxiv.org/pdf/hep-ph/0105096v2.pdf equation
9 I think you see everything you need to go from dMA to dMP_ij, ie dMA
inside MA^2 should be mulitipled with the appropriate factor factors
to get the the correction to the MP^2 elements.  Since dMA^(2loop)
includes bA^(2loop) you need to subtract this straight from dMA,
before multiplying with the approriate factors for the individual
elemnents.

Or alternatively to correct for the tapoles after adding the dMA
pieces in:

  MP_11 you want to subtract
      bA^(2loop) * sb^2
   = sb^2 * (sb^2 t_1^(2loop)/v_1 + cb^2 t_2^(2loop)/v_2)

  MP_22 you want to subtract
      bA^(2loop) * cb^2
   = cb^2 * (sb^2 t_1^(2loop)/v_1 + cb^2 t_2^(2loop)/v_2)

  MP_12 you want to subtract
      bA^(2loop) * sb * cb
   = sb*cb * (sb^2 t_1^(2loop)/v_1 + cb^2 t_2^(2loop)/v_2)


  Commit: 8be8fba0e0642e9efbe3061ba6944cefa7ac17aa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8be8fba0e0642e9efbe3061ba6944cefa7ac17aa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  decrease test precision for the CP-odd MSSM Higgs

The reason for the imprecision seems to be that the CP-odd pole mass
is written in Softsusy in terms of mHu^2 and mHd^2, and not in terms
of BMu.  However, the remaing (absolute) deviation is 0.004 GeV, which
is sufficient for current collider studies.


  Commit: f66212662f5c299defcb2e55154791f77046c9af
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f66212662f5c299defcb2e55154791f77046c9af
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/Parameters.m
    M meta/SelfEnergies.m
    M meta/TreeMasses.m
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M test/test_NMSSM_ewsb.cpp

  Log Message:
  -----------
  implement NMSSM two-loop tadpoles

Since the NMSSM has no Mu term, I introduced the model file variable
`EffectiveMu' which the user has to set to the effective Mu.


  Commit: f60410b2dd44c9e871abcebd342b31523c12dc6f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f60410b2dd44c9e871abcebd342b31523c12dc6f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M test/test_mssm_helpers.cpp

  Log Message:
  -----------
  adding test for the sign of the 2x2 sfermion mixing angle


  Commit: 64fdd673dce751d7315ee196fc1e252001b10628
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/64fdd673dce751d7315ee196fc1e252001b10628
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M src/mssm_helpers.cpp
    M test/test_mssm_helpers.cpp

  Log Message:
  -----------
  using same sign convention for theta as Softsusy


  Commit: 527bc2e4f6ff2f8d84d5011c517331115e1fa703
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/527bc2e4f6ff2f8d84d5011c517331115e1fa703
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M test/test_NMSSM_ewsb.cpp

  Log Message:
  -----------
  adding test for the two-loop EWSB in the NMSSM


  Commit: 6cd597bf220f00dbb36f9df11728211112d47d9f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6cd597bf220f00dbb36f9df11728211112d47d9f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 94e58fc265e8d3f8ba92f67385c7640bfeb88eb8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/94e58fc265e8d3f8ba92f67385c7640bfeb88eb8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M models/SoftsusyNMSSM/nmssmsoftsusy.cpp

  Log Message:
  -----------
  merge upstream NMSSM two-loop changes

Enables two-loop corrections in Z3 violating NMSSM


  Commit: 2b254aa2aecae7a0fb937f90a3c7656063fe1544
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b254aa2aecae7a0fb937f90a3c7656063fe1544
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/SelfEnergies.m

  Log Message:
  -----------
  add dummy functions for the CP-odd NMSSM Higgs two-loop self-energies


  Commit: 82fb10fe75c9b0d64aab76b1390ec5779cad525a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/82fb10fe75c9b0d64aab76b1390ec5779cad525a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    A src/nmssm_twoloophiggs.h

  Log Message:
  -----------
  add missing NMSSM two-loop header


  Commit: ed8dafb3ab2b6d8adb3580730bbc35d43bf4c883
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ed8dafb3ab2b6d8adb3580730bbc35d43bf4c883
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-10 (Mon, 10 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/TreeMasses.m
    M src/module.mk
    R src/mssm_helpers.cpp
    R src/mssm_helpers.hpp
    A src/sfermions.cpp
    A src/sfermions.hpp
    M test/module.mk
    R test/test_mssm_helpers.cpp
    A test/test_sfermions.cpp

  Log Message:
  -----------
  rename module with sfermion mass helper functions

Also fix linking error due to missing fortran libs.


  Commit: bfc83497587662d513a5d1438458f40ab1331a4c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bfc83497587662d513a5d1438458f40ab1331a4c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-12 (Wed, 12 Mar 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  name hypercharge gauge coupling as gY in the SLHA output

This will avoid confusion, because in most SARAH model files the
hypercharge coupling is named as g1, which is usually the GUT
normalized one.


  Commit: f089f3b46e43c343397f1099c012a4ba7f61f23f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f089f3b46e43c343397f1099c012a4ba7f61f23f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    M test/test_MSSM.hpp

  Log Message:
  -----------
  setting EWSB loop level correctly before calling solve_ewsb()


  Commit: 7f08ef4d57b9228903d11dceafa2ec2a0fdd7803
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7f08ef4d57b9228903d11dceafa2ec2a0fdd7803
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    M test/test_NMSSM.hpp

  Log Message:
  -----------
  add NMSSM test helper functions to ensure n-loop EWSB


  Commit: 65f20b702d496beb1922f788cf73d0e163519b4f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/65f20b702d496beb1922f788cf73d0e163519b4f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    M meta/Parameters.m

  Log Message:
  -----------
  add helper function which returns the number of independent entries of a real symmetric matrix


  Commit: 72b63f4e3b47d6be3f83429d0736cc55cc15c8ca
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/72b63f4e3b47d6be3f83429d0736cc55cc15c8ca
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    M meta/LoopMasses.m
    M meta/SelfEnergies.m
    M models/SoftsusyNMSSM/module.mk
    R models/SoftsusyNMSSM/nmssm2loop.f
    R models/SoftsusyNMSSM/nmssm2loop.h
    M src/module.mk
    A src/nmssm2loop.f
    A src/nmssm2loop.h
    M src/nmssm_twoloophiggs.h
    M test/module.mk
    A test/test_NMSSM_self_energies.cpp

  Log Message:
  -----------
  adding DMS and DMSB contributions to the 2l NMSSM Higg self-energy


  Commit: a9e6af84cf4e1ffe48034d31dc02e752e6e69aac
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a9e6af84cf4e1ffe48034d31dc02e752e6e69aac
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    M src/mssm_twoloophiggs.h
    M src/nmssm2loop.h
    M src/nmssm_twoloophiggs.h

  Log Message:
  -----------
  adding header inclusion protection


  Commit: 855efb8cd682c01298888fada2a6c6f9bb98de10
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/855efb8cd682c01298888fada2a6c6f9bb98de10
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    M src/two_scale_matching.hpp
    M src/two_scale_solver.cpp

  Log Message:
  -----------
  Set models of a matching object when adding it to two-scale solver


  Commit: 3e17cbeb75fbb9798a56018bccf76c5fb79b130f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3e17cbeb75fbb9798a56018bccf76c5fb79b130f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    M src/two_scale_solver.cpp

  Log Message:
  -----------
  Two-scale solver: run model to matching scale before matching


  Commit: f1af117f6a1d66d0ee3cf26f91014e31c22368f1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f1af117f6a1d66d0ee3cf26f91014e31c22368f1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-13 (Thu, 13 Mar 2014)

  Changed paths:
    A config/Makefile.tower.in
    M configure
    A examples/tower/LesHouches.in.tower
    A examples/tower/MSSM_MSSMRHN_initial_guesser.hpp
    A examples/tower/MSSM_MSSMRHN_matching.hpp
    A examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    A examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp
    A examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.hpp
    A examples/tower/MSSM_MSSMRHN_two_scale_matching.cpp
    A examples/tower/MSSM_MSSMRHN_two_scale_matching.hpp
    A examples/tower/run_tower.cpp
    A model_files/MSSMRHN/FlexibleSUSY.m.in
    A sarah/MSSMRHN/MSSMRHN.m
    A sarah/MSSMRHN/parameters.m
    A sarah/MSSMRHN/particles.m

  Log Message:
  -----------
  Add tower example


  Commit: e8cbe33a2778b2d861eaa0c9a8caf9fe4c6d8500
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e8cbe33a2778b2d861eaa0c9a8caf9fe4c6d8500
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  adding MSSM contributions to light NMSSM Higgses


  Commit: 62b18db0b3b4966e0751215fd39c50960067dbcb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/62b18db0b3b4966e0751215fd39c50960067dbcb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M test/test_NMSSM_self_energies.cpp

  Log Message:
  -----------
  higgs() does not modify sPhysical, need to modify it by hand


  Commit: 9609c93b628600eebbeffbb5b615708004b12b85
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9609c93b628600eebbeffbb5b615708004b12b85
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  adding assertions for the two-loop routines

These two-loop routines are specialized for MSSM and NMSSM Higgses and
require certain multiplet sizes of the Higges.


  Commit: 567dcd38d7696543f358d18e3fc1c6c89dffefff
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/567dcd38d7696543f358d18e3fc1c6c89dffefff
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M test/test_NMSSM_self_energies.cpp

  Log Message:
  -----------
  adding tests for the CP-odd NMSSM higgs self-energies


  Commit: 03532ddba476e5fffb230b374c3955dc59e5eae7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/03532ddba476e5fffb230b374c3955dc59e5eae7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M test/test_NMSSM_self_energies.cpp

  Log Message:
  -----------
  fix test precision for the NMSSM two-loop self-energies


  Commit: 1917474126e439b39ecdb7720f0bac6397a1b131
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1917474126e439b39ecdb7720f0bac6397a1b131
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M test/test_NMSSM_self_energies.cpp

  Log Message:
  -----------
  implement two-loop self-energy of CP-odd NMSSM Higgs


  Commit: 1a98051e6f771a7c0e069690180b3f284dac17ea
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1a98051e6f771a7c0e069690180b3f284dac17ea
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  reorder terms, for readability


  Commit: 36fa9a0e76e3cc049039fba286624ffe0b220c51
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/36fa9a0e76e3cc049039fba286624ffe0b220c51
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLogx


  Commit: a86eb6ee543b36743c9d00b09d23269d38c2755b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a86eb6ee543b36743c9d00b09d23269d38c2755b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M model_files/SMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  enable two-loop Higgs corrections in the SMSSM


  Commit: a4934f0635340df76874084fd1fef1c1c52c680c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a4934f0635340df76874084fd1fef1c1c52c680c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M model_files/NMSSM/LesHouches.in.NMSSM

  Log Message:
  -----------
  use two-loop EWSB and Higgs masses by default in the NMSSM SLHA file


  Commit: b6edb71a889f6e3ecc63cbbd426154084eb93ba2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b6edb71a889f6e3ecc63cbbd426154084eb93ba2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  adding extra newline after function definition


  Commit: 199bf6b4534e22d17b4826dae0caa2f16b051790
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/199bf6b4534e22d17b4826dae0caa2f16b051790
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M examples/module.mk
    R examples/run_softsusy.cpp
    M models/SoftsusyMSSM/module.mk
    A models/SoftsusyMSSM/run_SoftsusyMSSM.cpp
    M models/SoftsusyNMSSM/module.mk

  Log Message:
  -----------
  moving run_softsusy.x to models/SoftsusyMSSM/


  Commit: 8a8f5aa449054c05de8751deb803397bb7e994c1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8a8f5aa449054c05de8751deb803397bb7e994c1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-14 (Fri, 14 Mar 2014)

  Changed paths:
    M examples/module.mk
    R examples/run_softpoint.cpp
    R examples/run_softpoint.h
    M models/SoftsusyNMSSM/module.mk
    A models/SoftsusyNMSSM/run_softpoint.cpp
    A models/SoftsusyNMSSM/run_softpoint.h

  Log Message:
  -----------
  moving run_softpoint.x to models/SoftsusyNMSSM

This is now consistent with all the other model directories, which
also contain their executables.  Furthermore it reflects the
dependency on SoftsusyMSSM and SoftsusyNMSSM.


  Commit: e06c291757a9947056c0bf2bdbdfdae1fd0c82e3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e06c291757a9947056c0bf2bdbdfdae1fd0c82e3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M src/program_options.cpp
    M src/program_options.hpp

  Log Message:
  -----------
  set default EWSB and pole mass loop order to 2

This enables 2-loop Higgs mass corrections in case they are
available


  Commit: 9d2697e69515d6069c3e8a29562d96cdbde97c05
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9d2697e69515d6069c3e8a29562d96cdbde97c05
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M examples/switch_MSSM.cpp
    M src/module.mk
    R src/program_options.cpp
    R src/program_options.hpp
    A src/spectrum_generator_settings.cpp
    A src/spectrum_generator_settings.hpp
    M templates/run.cpp.in
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  renaming spectrum generator settings class to avoid confusion


  Commit: b757b24e99c84f5f41a7cde813c026dc9faf8d8d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b757b24e99c84f5f41a7cde813c026dc9faf8d8d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M slhaea/slhaea.h

  Log Message:
  -----------
  integrate slhaea.h from upstream


  Commit: a59eaef773386aab786c248337bdf6c0cd53a46e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a59eaef773386aab786c248337bdf6c0cd53a46e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  setting FLIBS for intel's ifort compiler


  Commit: 86a907ce930c59164744bd5f74ab6e1b7ef9573e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/86a907ce930c59164744bd5f74ab6e1b7ef9573e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M config/Makefile.in
    M config/Makefile.standalone.in
    M configure

  Log Message:
  -----------
  set dependency generators separately from compilers


  Commit: 2ed60b7267ddd981e09d13e049a612ab570fff78
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2ed60b7267ddd981e09d13e049a612ab570fff78
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  nice indentation of makefile variable setting


  Commit: 8859bbc42bf6cd7b2a0084c0f5a921c194eeb906
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8859bbc42bf6cd7b2a0084c0f5a921c194eeb906
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M config/Makefile.in
    M config/Makefile.standalone.in
    M configure
    M examples/module.mk
    R examples/run_softpoint.cpp
    R examples/run_softpoint.h
    R examples/run_softsusy.cpp
    M meta/WriteOut.m
    M models/SoftsusyMSSM/module.mk
    A models/SoftsusyMSSM/run_SoftsusyMSSM.cpp
    M models/SoftsusyNMSSM/module.mk
    A models/SoftsusyNMSSM/run_softpoint.cpp
    A models/SoftsusyNMSSM/run_softpoint.h
    M slhaea/slhaea.h

  Log Message:
  -----------
  Merge branch 'development' into feature-higgs-two-loop


  Commit: 3bf325959556e9864e54fedc6b51d288d20fe86e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3bf325959556e9864e54fedc6b51d288d20fe86e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-15 (Sat, 15 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  adding missing intel fortran libraries for run_softpoint.x


  Commit: c4661cfce2f1663959f110b04454c9d63120b878
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c4661cfce2f1663959f110b04454c9d63120b878
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-16 (Sun, 16 Mar 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  update README

Since SARAH 4.0.4 the user can simply put the SARAH model files into
FlexibleSUSY/sarah/


  Commit: 7f35acd1c816dc5a818e9cbdb87b91631d997ecd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7f35acd1c816dc5a818e9cbdb87b91631d997ecd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-16 (Sun, 16 Mar 2014)

  Changed paths:
    M config/config.h.in
    M configure

  Log Message:
  -----------
  write more system and build information into config.h


  Commit: 681b4c79b8058c5522833130f6697c894a0d9d34
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/681b4c79b8058c5522833130f6697c894a0d9d34
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-16 (Sun, 16 Mar 2014)

  Changed paths:
    A src/build_info.cpp
    A src/build_info.hpp
    M src/command_line_options.cpp
    M src/command_line_options.hpp
    M src/module.mk

  Log Message:
  -----------
  print build information on demand


  Commit: 484cd8f9ce50b9c69b4513847f383a8993b8b4cd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/484cd8f9ce50b9c69b4513847f383a8993b8b4cd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-16 (Sun, 16 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M templates/info.cpp.in
    M templates/info.hpp.in

  Log Message:
  -----------
  store info about low-energy model in model info module


  Commit: 21bd97d9dd69909ebe5c7e4c3bdd0ca7da938bea
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/21bd97d9dd69909ebe5c7e4c3bdd0ca7da938bea
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-16 (Sun, 16 Mar 2014)

  Changed paths:
    M src/command_line_options.cpp
    M src/command_line_options.hpp
    M templates/info.cpp.in
    M templates/info.hpp.in
    M templates/run.cpp.in

  Log Message:
  -----------
  add helper function to print model information


  Commit: cbb6f867c1a96ee3e35aaa5749c1c380da6ccb72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cbb6f867c1a96ee3e35aaa5749c1c380da6ccb72
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-16 (Sun, 16 Mar 2014)

  Changed paths:
    M src/build_info.cpp
    M src/build_info.hpp
    M src/command_line_options.cpp

  Log Message:
  -----------
  remove dependency on config.h

This reduces compilation time if ./configure is run again.


  Commit: 42a7ffa87cda15497e0b6c46bd76b2b4df44f365
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/42a7ffa87cda15497e0b6c46bd76b2b4df44f365
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-16 (Sun, 16 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  remove -frecursive from default FFLAGS

It is not needed because there are no recursive Fortran functions.


  Commit: c3892eded114cba312814f5842ba1218d3cc76fd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c3892eded114cba312814f5842ba1218d3cc76fd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-17 (Mon, 17 Mar 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  update benchmark numbers with Higgs two-loop corrections


  Commit: 285485f7ecde2e6e1b39d6e6df44a6c295a86e94
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/285485f7ecde2e6e1b39d6e6df44a6c295a86e94
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-17 (Mon, 17 Mar 2014)

  Changed paths:
    M README
    M config/config.h.in
    M configure
    M meta/FlexibleSUSY.m
    A src/build_info.cpp
    A src/build_info.hpp
    M src/command_line_options.cpp
    M src/command_line_options.hpp
    M src/module.mk
    M templates/info.cpp.in
    M templates/info.hpp.in
    M templates/run.cpp.in

  Log Message:
  -----------
  Merge branch 'development' into feature-higgs-two-loop


  Commit: fafe5c3b875eefcab0a82775d466df6cc26fb12a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fafe5c3b875eefcab0a82775d466df6cc26fb12a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-17 (Mon, 17 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M test/test_NMSSM_self_energies.cpp

  Log Message:
  -----------
  directly subtract the two-loop NMSSM tadpoles in the gauge basis


  Commit: 744640d8eba62d4874ae671ebe1ed4aa9b24e01f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/744640d8eba62d4874ae671ebe1ed4aa9b24e01f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-18 (Tue, 18 Mar 2014)

  Changed paths:
    M README
    M config/Makefile.in
    M config/Makefile.standalone.in
    M config/config.h.in
    M configure
    M examples/module.mk
    R examples/run_softpoint.cpp
    R examples/run_softpoint.h
    R examples/run_softsusy.cpp
    M meta/FlexibleSUSY.m
    M models/SoftsusyMSSM/module.mk
    A models/SoftsusyMSSM/run_SoftsusyMSSM.cpp
    M models/SoftsusyNMSSM/module.mk
    A models/SoftsusyNMSSM/run_softpoint.cpp
    A models/SoftsusyNMSSM/run_softpoint.h
    M slhaea/slhaea.h
    A src/build_info.cpp
    A src/build_info.hpp
    M src/command_line_options.cpp
    M src/command_line_options.hpp
    M src/module.mk
    M templates/info.cpp.in
    M templates/info.hpp.in
    M templates/run.cpp.in

  Log Message:
  -----------
  Merge branch 'development' into feature-tower


  Commit: ac1dc4d9507be484950e7157fe928676785ef293
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ac1dc4d9507be484950e7157fe928676785ef293
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-18 (Tue, 18 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Revert "remove -frecursive from default FFLAGS"

This reverts commit 42a7ffa87cda15497e0b6c46bd76b2b4df44f365.

Jae-hyeon wrote:

-frecursive was there for thread-safety. Without the flag, there is a
potential danger that different threads might share a local array in a
fortran function.  Please see the manual of gfortran.


  Commit: d4a70747a515f91354d285369bb8d80570cb4db5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d4a70747a515f91354d285369bb8d80570cb4db5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-18 (Tue, 18 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  adding -frecursive to FFLAGS only for gfortan

Intel's ifort does not know about -frecursive .


  Commit: 458fa8f01e46f00ac3af34e986364215c836a80e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/458fa8f01e46f00ac3af34e986364215c836a80e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-18 (Tue, 18 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  adding -recursive to FFLAGS for Intel's ifort


  Commit: a53a0bf9acb54cd1aee09a8f319e27380807b628
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a53a0bf9acb54cd1aee09a8f319e27380807b628
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-19 (Wed, 19 Mar 2014)

  Changed paths:
    M config/Makefile.tower.in
    M configure

  Log Message:
  -----------
  config/Makefile.tower.in: adapt to commit 86a907


  Commit: 67e043b303ca079535d1b95294517aa41ceb53d3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/67e043b303ca079535d1b95294517aa41ceb53d3
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-19 (Wed, 19 Mar 2014)

  Changed paths:
    M test/test_two_scale_sm_smcw_integration.cpp
    M test/test_two_scale_solver.cpp

  Log Message:
  -----------
  Adapt test suite to commits 855efb 3e17cb


  Commit: b9342e16f5160384f022d1dd9270cf2023ed4323
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b9342e16f5160384f022d1dd9270cf2023ed4323
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-19 (Wed, 19 Mar 2014)

  Changed paths:
    M examples/tower/run_tower.cpp

  Log Message:
  -----------
  Suppress a warning in tower example


  Commit: 57e912f6c8eed0fc3eb913e486d022f6c20c3b3f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/57e912f6c8eed0fc3eb913e486d022f6c20c3b3f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-19 (Wed, 19 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: 4b830f0b109c36b145ff6437c708dcad3554e32c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4b830f0b109c36b145ff6437c708dcad3554e32c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-19 (Wed, 19 Mar 2014)

  Changed paths:
    M ChangeLog
    A config/Makefile.tower.in
    M configure
    A examples/tower/LesHouches.in.tower
    A examples/tower/MSSM_MSSMRHN_initial_guesser.hpp
    A examples/tower/MSSM_MSSMRHN_matching.hpp
    A examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    A examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp
    A examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.hpp
    A examples/tower/MSSM_MSSMRHN_two_scale_matching.cpp
    A examples/tower/MSSM_MSSMRHN_two_scale_matching.hpp
    A examples/tower/run_tower.cpp
    A model_files/MSSMRHN/FlexibleSUSY.m.in
    A sarah/MSSMRHN/MSSMRHN.m
    A sarah/MSSMRHN/parameters.m
    A sarah/MSSMRHN/particles.m
    M src/two_scale_matching.hpp
    M src/two_scale_solver.cpp
    M test/test_two_scale_sm_smcw_integration.cpp
    M test/test_two_scale_solver.cpp

  Log Message:
  -----------
  Merge branch 'feature-tower' into development


  Commit: ce9fd124c3d8fa36a5779c303b9651d08e9e2025
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ce9fd124c3d8fa36a5779c303b9651d08e9e2025
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  subtract the two-loop tadpoles directly in the MSSM

This is now the straigth forward subtraction from the diagonal
elements of the CP-odd mass matrix.


  Commit: 33ef5ad5e32538c40525b465c595f168bb604ef5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/33ef5ad5e32538c40525b465c595f168bb604ef5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: discriminate icpc from g++

See http://software.intel.com/en-us/node/462874 .


  Commit: f021155ca3c53f6c0f4af8004efae05c24bde7ce
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f021155ca3c53f6c0f4af8004efae05c24bde7ce
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: add icpc and ifort to list of compilers supporting -fPIC

See: http://software.intel.com/en-us/node/460394
     http://software.intel.com/en-us/node/464148


  Commit: f813b801daa14b81df0881f03e87b90c70a0aa7f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f813b801daa14b81df0881f03e87b90c70a0aa7f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: add function to check for icpc


  Commit: bf1334c50b519a2de55c164147c44dbf505648c1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf1334c50b519a2de55c164147c44dbf505648c1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  adding --enable-/disable-compiler-warnings switch


  Commit: 9d7405a93fb72be566ea25d57388f598de0ef352
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9d7405a93fb72be566ea25d57388f598de0ef352
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  enable compiler warnings in CXXFLAGS if enable_compiler_warnings = yes


  Commit: b868ee0974b5235f92a2d7c8e5ba3893feca727c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b868ee0974b5235f92a2d7c8e5ba3893feca727c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  set DATE to "unknown" if `date' command is not available


  Commit: eb09e0959de6e2ea444ed51729c1c6e7f48702fb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/eb09e0959de6e2ea444ed51729c1c6e7f48702fb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M src/error.hpp
    M src/two_scale_running_precision.hpp
    M templates/two_scale_model.hpp.in
    M templates/two_scale_soft_parameters.hpp.in
    M templates/two_scale_susy_parameters.hpp.in

  Log Message:
  -----------
  make non-copy constuctors w/ one parameter explicit


  Commit: 6d7c5cbaa93f51052d298e0ad089eb3a80af68c7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6d7c5cbaa93f51052d298e0ad089eb3a80af68c7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M config/Makefile.in
    M config/Makefile.standalone.in
    M config/Makefile.tower.in
    M configure

  Log Message:
  -----------
  using separate CXXFLAGS during the dependency generation


  Commit: e6cc200ffe58381773de6d9eb32d8d8f98a57e8c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e6cc200ffe58381773de6d9eb32d8d8f98a57e8c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M test/test_MSSM_slha_output.cpp

  Log Message:
  -----------
  correcting path to run_softpoint.x


  Commit: b2fe846a718e9a0a0b837396326caca3be7bd909
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b2fe846a718e9a0a0b837396326caca3be7bd909
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  relax test precision to 2.0e-10 for icpc


  Commit: 66b43f7a109166a33934445092e221b5f2c74e9b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/66b43f7a109166a33934445092e221b5f2c74e9b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M meta/Constraint.m
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  adding CheckConstraint[] function to help the user debugging


  Commit: 9e5f05c9123f2769417f75b126a3337dd85f2bda
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9e5f05c9123f2769417f75b126a3337dd85f2bda
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-20 (Thu, 20 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Check g++ version also if it is dependency generation command

The purpose is to pass -std=c++0x instead of -std=c++11 to g++ if it
is older than 4.7.


  Commit: 7d4376520036d52608934baa835347647bd68eb2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7d4376520036d52608934baa835347647bd68eb2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-21 (Fri, 21 Mar 2014)

  Changed paths:
    M test/test_benchmark.cpp

  Log Message:
  -----------
  correcting path to run_softpoint.x


  Commit: 98320477349234cc507fb48cfc447977650134b9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/98320477349234cc507fb48cfc447977650134b9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-21 (Fri, 21 Mar 2014)

  Changed paths:
    M ChangeLog
    M doc/paper.tex
    M examples/switch_MSSM.cpp
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/Parameters.m
    M meta/SelfEnergies.m
    M meta/TreeMasses.m
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/LesHouches.in.lowMSSM
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyMSSM/softsusy.cpp
    M models/SoftsusyMSSM/softsusy.h
    R models/SoftsusyMSSM/twoloophiggs.f
    R models/SoftsusyMSSM/twoloophiggs.h
    M models/SoftsusyNMSSM/module.mk
    R models/SoftsusyNMSSM/nmssm2loop.f
    R models/SoftsusyNMSSM/nmssm2loop.h
    M models/SoftsusyNMSSM/nmssmsoftsusy.cpp
    M models/SoftsusyNMSSM/run_softpoint.h
    M src/module.mk
    A src/mssm_twoloophiggs.f
    A src/mssm_twoloophiggs.h
    A src/nmssm2loop.f
    A src/nmssm2loop.h
    A src/nmssm_twoloophiggs.h
    R src/program_options.cpp
    R src/program_options.hpp
    A src/sfermions.cpp
    A src/sfermions.hpp
    A src/spectrum_generator_settings.cpp
    A src/spectrum_generator_settings.hpp
    M src/wrappers.hpp
    M templates/run.cpp.in
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M test/module.mk
    M test/test_MSSM.hpp
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_low_scale_constraint.cpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    A test/test_NMSSM_self_energies.cpp
    A test/test_sfermions.cpp

  Log Message:
  -----------
  Merge branch 'feature-higgs-two-loop' into development

Conflicts:
	ChangeLog


  Commit: c8cc67700c7ce73b9bbcb6a25d27d5671cf97615
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c8cc67700c7ce73b9bbcb6a25d27d5671cf97615
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-21 (Fri, 21 Mar 2014)

  Changed paths:
    M test/test_NMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  relaxing test precision a bit for icpc


  Commit: 88b4ea37b091229e522755ee26a54f17771f0ceb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/88b4ea37b091229e522755ee26a54f17771f0ceb
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-21 (Fri, 21 Mar 2014)

  Changed paths:
    M examples/tower/run_tower.cpp

  Log Message:
  -----------
  Adapt tower example to commit 9d2697e


  Commit: afbfd393f8471cc2545d89850c33a59e98117a89
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/afbfd393f8471cc2545d89850c33a59e98117a89
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-21 (Fri, 21 Mar 2014)

  Changed paths:
    A examples/tower/run_example.sh
    M test/module.mk
    A test/test_tower.sh

  Log Message:
  -----------
  Add test/test_tower.sh


  Commit: 24fcbc91d1b54c75277248e9274f479eb2cce10b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/24fcbc91d1b54c75277248e9274f479eb2cce10b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-21 (Fri, 21 Mar 2014)

  Changed paths:
    M src/module.mk

  Log Message:
  -----------
  Link src/libflexisusy.so against $(FLIBS)


  Commit: ba22b228884be2808b2813f0a730df620e40deaa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ba22b228884be2808b2813f0a730df620e40deaa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-22 (Sat, 22 Mar 2014)

  Changed paths:
    M src/numerics.hpp

  Log Message:
  -----------
  adding missing header inclusion


  Commit: 804da4d7a01f0c8ca8f9cc546289477fb45de682
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/804da4d7a01f0c8ca8f9cc546289477fb45de682
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-22 (Sat, 22 Mar 2014)

  Changed paths:
    M legacy/conversion.hpp
    M legacy/diagonalization.hpp
    M legacy/rk_legacy.hpp
    M src/SM.hpp
    M src/build_info.hpp
    M src/rk.hpp
    M src/sfermions.hpp
    M src/spectrum_generator_settings.hpp
    M src/wrappers.hpp

  Log Message:
  -----------
  make header inclusion protection consistent


  Commit: c9cd7cf3948fb875e1c1b8db5b9f7558a9b5269d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c9cd7cf3948fb875e1c1b8db5b9f7558a9b5269d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-23 (Sun, 23 Mar 2014)

  Changed paths:
    M test/module.mk

  Log Message:
  -----------
  adding missing liblegacy to test program dependencies

This linking problem shows only if configured with

  --disable-static-libs
  --with-lib-ext=".so"
  --with-make-lib-cmd="gcc -shared -o"


  Commit: db039b21b9ddc2a1dea33c8fcd7c67ec6011689d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/db039b21b9ddc2a1dea33c8fcd7c67ec6011689d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-23 (Sun, 23 Mar 2014)

  Changed paths:
    M models/SoftsusyNMSSM/nmssmsoftsusy.cpp

  Log Message:
  -----------
  adding missing implementation of operator=(const NmssmSoftsusy&)


  Commit: 70e2d5215e36d47214b6a2c710575a7687f388be
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/70e2d5215e36d47214b6a2c710575a7687f388be
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-23 (Sun, 23 Mar 2014)

  Changed paths:
    M models/SoftsusyNMSSM/nmssmsoftsusy.cpp
    M models/SoftsusyNMSSM/nmssmsoftsusy.h

  Log Message:
  -----------
  removing unused functions (from Softsusy upstream)


  Commit: b33993c256f6798b41d58a480f33a38f124626b2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b33993c256f6798b41d58a480f33a38f124626b2
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-23 (Sun, 23 Mar 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  Add comment on dynamic linking using Intel compilers


  Commit: 8716e86ed61e31b70361a029258af271c8d1b835
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8716e86ed61e31b70361a029258af271c8d1b835
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-24 (Mon, 24 Mar 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  Specify required icpc version

Version 13.1 or older fails to compile FS.


  Commit: 88398f964e0e69dd67f564afc87ab6bac615e73f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/88398f964e0e69dd67f564afc87ab6bac615e73f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-24 (Mon, 24 Mar 2014)

  Changed paths:
    M ChangeLog
    M README
    M config/Makefile.in
    M config/Makefile.standalone.in
    A config/Makefile.tower.in
    M config/config.h.in
    M configure
    M doc/paper.tex
    M examples/module.mk
    R examples/run_softpoint.cpp
    R examples/run_softpoint.h
    R examples/run_softsusy.cpp
    M examples/switch_MSSM.cpp
    A examples/tower/LesHouches.in.tower
    A examples/tower/MSSM_MSSMRHN_initial_guesser.hpp
    A examples/tower/MSSM_MSSMRHN_matching.hpp
    A examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    A examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp
    A examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.hpp
    A examples/tower/MSSM_MSSMRHN_two_scale_matching.cpp
    A examples/tower/MSSM_MSSMRHN_two_scale_matching.hpp
    A examples/tower/run_example.sh
    A examples/tower/run_tower.cpp
    M legacy/conversion.hpp
    M legacy/diagonalization.hpp
    M legacy/rk_legacy.hpp
    M meta/Constraint.m
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/Parameters.m
    M meta/SelfEnergies.m
    M meta/TreeMasses.m
    M meta/WriteOut.m
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSM/LesHouches.in.MSSM
    A model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/LesHouches.in.lowMSSM
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M models/SoftsusyMSSM/module.mk
    A models/SoftsusyMSSM/run_SoftsusyMSSM.cpp
    M models/SoftsusyMSSM/softsusy.cpp
    M models/SoftsusyMSSM/softsusy.h
    R models/SoftsusyMSSM/twoloophiggs.f
    R models/SoftsusyMSSM/twoloophiggs.h
    M models/SoftsusyNMSSM/module.mk
    R models/SoftsusyNMSSM/nmssm2loop.f
    R models/SoftsusyNMSSM/nmssm2loop.h
    M models/SoftsusyNMSSM/nmssmsoftsusy.cpp
    M models/SoftsusyNMSSM/nmssmsoftsusy.h
    A models/SoftsusyNMSSM/run_softpoint.cpp
    A models/SoftsusyNMSSM/run_softpoint.h
    A sarah/MSSMRHN/MSSMRHN.m
    A sarah/MSSMRHN/parameters.m
    A sarah/MSSMRHN/particles.m
    M slhaea/slhaea.h
    M src/SM.hpp
    A src/build_info.cpp
    A src/build_info.hpp
    M src/command_line_options.cpp
    M src/command_line_options.hpp
    M src/error.hpp
    M src/module.mk
    A src/mssm_twoloophiggs.f
    A src/mssm_twoloophiggs.h
    A src/nmssm2loop.f
    A src/nmssm2loop.h
    A src/nmssm_twoloophiggs.h
    M src/numerics.hpp
    R src/program_options.cpp
    R src/program_options.hpp
    M src/rk.hpp
    A src/sfermions.cpp
    A src/sfermions.hpp
    A src/spectrum_generator_settings.cpp
    A src/spectrum_generator_settings.hpp
    M src/two_scale_matching.hpp
    M src/two_scale_running_precision.hpp
    M src/two_scale_solver.cpp
    M src/wrappers.hpp
    M templates/info.cpp.in
    M templates/info.hpp.in
    M templates/run.cpp.in
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M templates/two_scale_soft_parameters.hpp.in
    M templates/two_scale_susy_parameters.hpp.in
    M test/module.mk
    M test/test_MSSM.hpp
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_low_scale_constraint.cpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_slha_output.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    A test/test_NMSSM_self_energies.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp
    M test/test_benchmark.cpp
    A test/test_sfermions.cpp
    A test/test_tower.sh
    M test/test_two_scale_sm_smcw_integration.cpp
    M test/test_two_scale_solver.cpp

  Log Message:
  -----------
  Merge branch 'development' into bugfix-color-factor


  Commit: c6391fafa67e93c5a74a6cce07a7715071fc7bf1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c6391fafa67e93c5a74a6cce07a7715071fc7bf1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-25 (Tue, 25 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/Vertices.m

  Log Message:
  -----------
  Check color structures of SARAH`Cp[] objects

Ensure that all the SARAH`Cp[] objects that need explicit color
summation have the field arguments in the correct order: the first two
entries must be external fields.

From: Jae-hyeon Park <jae.park at uv.es>
Subject: Re: Missing color summation for 4-SOc vertex
To: Florian Staub <fnstaub at th.physik.uni-bonn.de>
Cc: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
Date: Wed, 19 Mar 2014 17:53:33 +0100 (5 days, 23 hours, 39 minutes ago)

[snip]

> For the moment I did a rather easy fix: I check if none of the four
> particles is a rotated state. In this case I assume that the  "last
> two" states are running in the loop and I sum over their color. (One
> can to this since the quartic couplings are not used anywhere else but
> for the loops).  That convention must, of course, be used later on in
> the loop calculations as well.
>
> That should work for all models delivered with SARAH. Of course, the
> case that two different scalars which are colored are present which
> appear only in one generation (i.e. couplings of the form X X^* Y Y^*)
> would need to declare two different couplings, one with sum over the
> color of X the over Y. That's not yet supported, but I'm not sure if
> your procedure would catch this case?

I believe that our procedure would find the right color indices to
contract since it always checks whose self energy it is: if it is Y's
self energy, X's colors are summed over, and likewise for the other
case.

If I understand the scheme you explained above correctly, it is
then important to distinguish between

    Cp[X, conj[X], Y, conj[Y]] and Cp[Y, conj[Y], X, conj[X]]

since they are different objects representing different color
contractions.

[snip]


  Commit: 3f41d47af54be30d38d3d4464ddbf915ff6a5d23
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3f41d47af54be30d38d3d4464ddbf915ff6a5d23
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-25 (Tue, 25 Mar 2014)

  Changed paths:
    M meta/Vertices.m

  Log Message:
  -----------
  Bugfix: generalize color summation routine

1. FS now selects color indices (not) to contract, not by the forms of
the associated generation indices (which are not available if there is
only a single generation), but by comparing each field inside
SARAH`Cp[] with f where f is from SelfEnergies`FSSelfEnergy[f, __].
This enables color summation for instance of Cp[SOc, conj[SOc],
conj[SOc], SOc].

2. FS now sums over one color index common to the two fields being
contracted (as SARAH 4.1.0 does).  For contraction of color triplets,
this leads to the same result as the previous implementation which did
double summation over two independent color indices.  For color
octets, the results differ.  The new implementation makes more sense.
The result still needs to be checked.


  Commit: e38b455444ed98b5470781064f2c0a5c6e119e2e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e38b455444ed98b5470781064f2c0a5c6e119e2e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-26 (Wed, 26 Mar 2014)

  Changed paths:
    M ChangeLog
    M meta/Constraint.m
    M meta/FlexibleSUSY.m
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in

  Log Message:
  -----------
  allow to constrain the boundary condition scale

via the new model file variables {Low,SUSY,High}ScaleMinimum and
{Low,SUSY,High}ScaleMaximum .


  Commit: 6ed859c345836ab646a94e3ebe9c787b4b55d06e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6ed859c345836ab646a94e3ebe9c787b4b55d06e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-26 (Wed, 26 Mar 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  restrict the E6SSM GUT scale to be within [1.e4, 5.e17]

This avoids non-perturbative problems due to a badly guessed /
calculated GUT scale.


  Commit: 54750897cbfc34a051acda3b499649de675083f1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/54750897cbfc34a051acda3b499649de675083f1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-26 (Wed, 26 Mar 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Fix a typo in configure


  Commit: 32c32226a10a96eaf7c350bf20f68f22a22fd7ce
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/32c32226a10a96eaf7c350bf20f68f22a22fd7ce
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-26 (Wed, 26 Mar 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/Vertices.m

  Log Message:
  -----------
  Merge branch 'bugfix-color-factor' into development


  Commit: 9b750d6a7d2895096a5469e2e0d59dc0de1bc6c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9b750d6a7d2895096a5469e2e0d59dc0de1bc6c8
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-03-26 (Wed, 26 Mar 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: be6dfb45555196018483519325a87039012e6e15
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/be6dfb45555196018483519325a87039012e6e15
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-30 (Sun, 30 Mar 2014)

  Changed paths:
    M doc/chapters/usage.tex
    M doc/paper.tex
    M meta/FlexibleSUSY.m
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M models/SoftsusyMSSM/SoftsusyMSSM_parameter_point.hpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  setting first guess for MX to 2 10^16

This improves convergence, because the new guessed MX is closer to the
final value.


  Commit: cc8384bbb2e0a451accd470ca72e05dd8246d39a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cc8384bbb2e0a451accd470ca72e05dd8246d39a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-30 (Sun, 30 Mar 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  adding `depend' make target

This is kind of a standard target in all major packages.


  Commit: 3c6124664431f8902847dd144cdb7d2ce246af86
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3c6124664431f8902847dd144cdb7d2ce246af86
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-03-30 (Sun, 30 Mar 2014)

  Changed paths:
    M test/test_MSSM_low_scale_constraint.cpp

  Log Message:
  -----------
  increasing test precision for MSSM low-scale gauge couplings


  Commit: 8dc9f244c4510aa6a3802fc62e19dec96ccc0c29
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8dc9f244c4510aa6a3802fc62e19dec96ccc0c29
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  adding dummy implementation of fill(<model>&) function


  Commit: 3295928bfb4b80d0e45f979b273ce3e57fa7272d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3295928bfb4b80d0e45f979b273ce3e57fa7272d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  renaming SLHA read function


  Commit: 6fd58cbdbf68e19e6a3baf96c97dedde4a740962
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6fd58cbdbf68e19e6a3baf96c97dedde4a740962
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/WriteOut.m
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  implementation of reading SLHA output files


  Commit: 1b891fec32dd893704eb951b9fa8b444a65bf906
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1b891fec32dd893704eb951b9fa8b444a65bf906
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M src/slha_io.cpp
    M src/slha_io.hpp
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  adding clear() function to the SLHA classes


  Commit: 4de2535eb55c2c2beae8801c181d562ec5f323b6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4de2535eb55c2c2beae8801c181d562ec5f323b6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M test/module.mk
    A test/test_MSSM_slha_input.cpp

  Log Message:
  -----------
  adding SLHA reading test


  Commit: c61f42dd9e6c23c560aff9183cc87b297b0352e8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c61f42dd9e6c23c560aff9183cc87b297b0352e8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  remove debug output


  Commit: 7b5b0346b147d2c0e3f085ac972d236debbea4d8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7b5b0346b147d2c0e3f085ac972d236debbea4d8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/WriteOut.m
    M test/test_MSSM_slha_input.cpp

  Log Message:
  -----------
  gut-normalize g1 gauge coupling after reading


  Commit: ae64057fe814eefff71190cdefc4b03c3b70fe16
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ae64057fe814eefff71190cdefc4b03c3b70fe16
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/WriteOut.m
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  use macro to extract plain function return type


  Commit: 620f4d14daeb07b9e10b66e1d37e72e6e822037d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/620f4d14daeb07b9e10b66e1d37e72e6e822037d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M test/test_MSSM_slha_input.cpp

  Log Message:
  -----------
  test Yukawa coupling reading


  Commit: b5e8e3c49771faa7484eedefc7eb3b0760009063
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b5e8e3c49771faa7484eedefc7eb3b0760009063
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M src/slha_io.cpp
    M src/slha_io.hpp
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M test/module.mk
    A test/test_MSSM_slha_input.cpp

  Log Message:
  -----------
  Merge branch 'feature-read-model-parameters' into development


  Commit: 4395a31699c7ad8ac235391819ef2df10e60fad2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4395a31699c7ad8ac235391819ef2df10e60fad2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/ThresholdCorrections.m
    M model_files/MSSM/FlexibleSUSY.m.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in

  Log Message:
  -----------
  split calculation of Yukawa couplings


  Commit: 1894f656009f08e4e306b1fc504bc09bd4ed5e26
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1894f656009f08e4e306b1fc504bc09bd4ed5e26
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/Constraint.m
    M meta/ThresholdCorrections.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in

  Log Message:
  -----------
  enable explicite setting of low-scale Yukawa couplings


  Commit: a98cff29fd00abe81766f9c3730aba36ae8e5fc0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a98cff29fd00abe81766f9c3730aba36ae8e5fc0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M examples/standalone-rge/standalone.cpp
    M meta/CConversion.m
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M src/wrappers.hpp

  Log Message:
  -----------
  allow for arbitrary zero matrices


  Commit: cc22df5d4723cfb2f4f75a9496ab5c6c041c5e4a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cc22df5d4723cfb2f4f75a9496ab5c6c041c5e4a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.hpp.in

  Log Message:
  -----------
  adapt low-energy model initial guesser accordingly


  Commit: c546d540259dc19e80c98216ee22b5d1bb28d244
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c546d540259dc19e80c98216ee22b5d1bb28d244
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/ThresholdCorrections.m
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in

  Log Message:
  -----------
  give local variables names analog to the user defined ones


  Commit: 33e88bc02ca2dd9244c825bd0a37e0da0821c161
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/33e88bc02ca2dd9244c825bd0a37e0da0821c161
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 14a6fee59185f482ab66f4000f2d0f712a05cd6b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/14a6fee59185f482ab66f4000f2d0f712a05cd6b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  warn about unset Yukawa couplings


  Commit: ea4c28148700cfd91f0f47b048fdc21ce4820613
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea4c28148700cfd91f0f47b048fdc21ce4820613
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/ThresholdCorrections.m

  Log Message:
  -----------
  catch case where mass matrix is zero

A zero matrix cannot be inverted


  Commit: 3f5b02d63bd3f68ca0872297d90790241655ada9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3f5b02d63bd3f68ca0872297d90790241655ada9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M meta/Parameters.m
    M meta/ThresholdCorrections.m
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  set Yukawa couplings only if they are defined


  Commit: 7a42cbc189266c842b01878201797a7701d27b79
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7a42cbc189266c842b01878201797a7701d27b79
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    A model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    A sarah/NoYukawaMSSM/NoYukawaMSSM.m
    A sarah/NoYukawaMSSM/parameters.m
    A sarah/NoYukawaMSSM/particles.m

  Log Message:
  -----------
  adding test model without Yukawa couplings


  Commit: 206dff42a70073db81d3f42b44e3cbaf9983702a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/206dff42a70073db81d3f42b44e3cbaf9983702a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-01 (Tue, 01 Apr 2014)

  Changed paths:
    M ChangeLog
    M examples/standalone-rge/standalone.cpp
    M meta/CConversion.m
    M meta/Constraint.m
    M meta/FlexibleSUSY.m
    M meta/Parameters.m
    M meta/ThresholdCorrections.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    A model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    A sarah/NoYukawaMSSM/NoYukawaMSSM.m
    A sarah/NoYukawaMSSM/parameters.m
    A sarah/NoYukawaMSSM/particles.m
    M src/wrappers.hpp
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser.hpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  Merge branch 'feature-yukawa-def' into development


  Commit: 399ae3048be6d0b39ecb4e64dff29b947fb14ed7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/399ae3048be6d0b39ecb4e64dff29b947fb14ed7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-02 (Wed, 02 Apr 2014)

  Changed paths:
    M model_files/LHInputMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  remove trailing comma


  Commit: b695fd2bdcbc4f1026716677aa38867f2c1239f7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b695fd2bdcbc4f1026716677aa38867f2c1239f7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-02 (Wed, 02 Apr 2014)

  Changed paths:
    M meta/Constraint.m

  Log Message:
  -----------
  catch invalid constraint settings


  Commit: fa0d05f98b5ed2834aaad936d0d7084cbd43becb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fa0d05f98b5ed2834aaad936d0d7084cbd43becb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-02 (Wed, 02 Apr 2014)

  Changed paths:
    M meta/Constraint.m
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  check initial guesses for consistenci as well


  Commit: ae8b3434510b27a33bd5f4c79fba27b76d73f385
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ae8b3434510b27a33bd5f4c79fba27b76d73f385
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-02 (Wed, 02 Apr 2014)

  Changed paths:
    M model_files/MRSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  remove trailing comma from constraint list


  Commit: 04acc48cc7cc793db2761b3a9d96f2d794dbadc7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/04acc48cc7cc793db2761b3a9d96f2d794dbadc7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-03 (Thu, 03 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  include <thread> header only when needed


  Commit: 1ec9436109b764243421936ce4283ad25f173163
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1ec9436109b764243421936ce4283ad25f173163
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-03 (Thu, 03 Apr 2014)

  Changed paths:
    M test/test_slha_io.cpp

  Log Message:
  -----------
  remove unused header inclusion


  Commit: e219807c6eedb0e6a3a75c8653805f17a6aa3a6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e219807c6eedb0e6a3a75c8653805f17a6aa3a6e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-03 (Thu, 03 Apr 2014)

  Changed paths:
    M test/test_slha_io.cpp

  Log Message:
  -----------
  Revert "remove unused header inclusion"

This reverts commit 1ec9436109b764243421936ce4283ad25f173163.


  Commit: abe683cbe2d4b938e5db437608b78f8778e5f2e1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/abe683cbe2d4b938e5db437608b78f8778e5f2e1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-03 (Thu, 03 Apr 2014)

  Changed paths:
    M test/test_two_scale_mssm_initial_guesser.cpp
    M test/test_two_scale_mssm_solver.cpp

  Log Message:
  -----------
  remove unnecessary use of the stopwatch


  Commit: 50b12e52e95322d7f11d6dd5923a0b584509c244
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/50b12e52e95322d7f11d6dd5923a0b584509c244
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    A sarah/myE6SSM/myE6SSM.m
    A sarah/myE6SSM/parameters.m
    A sarah/myE6SSM/particles.m

  Log Message:
  -----------
  adding sarah directory myE6SSM with new updated style and a phase for HPrime states.


  Commit: 233d98d6cb752ee3ffad72f0578144a79c314441
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/233d98d6cb752ee3ffad72f0578144a79c314441
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    A sarah/E6SSMnew/E6SSMnew.m
    A sarah/E6SSMnew/parameters.m
    A sarah/E6SSMnew/particles.m

  Log Message:
  -----------
  added E6SSMnew sarah directory with updated versions of E6SSM files.


  Commit: 08c5592fd36dfb2692346bb045eb3f6341717e64
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/08c5592fd36dfb2692346bb045eb3f6341717e64
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M config/config.h.in
    M meta/FlexibleSUSY.m
    M templates/start.m.in
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  enable/disable multi-threading at the compilation level

This avoids to recreate the spectum generator C++ code in case
multi-threading should be switched on/off.  On just needs to
re-compile defining/undefining ENABLE_THREADS


  Commit: eec0845890bdccaa83f7b272e82d1e704543858d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/eec0845890bdccaa83f7b272e82d1e704543858d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M config/Makefile.standalone.in
    M config/Makefile.tower.in
    M config/config.h.in
    M configure

  Log Message:
  -----------
  enable/disable multi-threading via the configure script


  Commit: c105dabdd2a16ff44f706a9b6a8afb4460e66e20
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c105dabdd2a16ff44f706a9b6a8afb4460e66e20
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M config/config.h.in
    M configure
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  use preprocessor define statement in config.h for looptools


  Commit: fd9bfc1af014d06348057fe98e430f7524d396c9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fd9bfc1af014d06348057fe98e430f7524d396c9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 90bf1b68e5d32ef5298d3a692d23351481520c73
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/90bf1b68e5d32ef5298d3a692d23351481520c73
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  do not print out enabling/disabling msgs for default settings


  Commit: 60657d7541cb22cd90e76d4896d6450aecc9684f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/60657d7541cb22cd90e76d4896d6450aecc9684f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M templates/scan.cpp.in

  Log Message:
  -----------
  remove time data from scan output


  Commit: ef6b2a2d00bc86516321b4f752f0cedd6dc9c5cc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ef6b2a2d00bc86516321b4f752f0cedd6dc9c5cc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M src/module.mk
    R src/stopwatch.cpp
    R src/stopwatch.hpp
    M test/module.mk
    A test/stopwatch.cpp
    A test/stopwatch.hpp

  Log Message:
  -----------
  adding a test library where we put the stopwatch into


  Commit: a83c988e15a5f4c29d0917c7ee385fefd0ec8369
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a83c988e15a5f4c29d0917c7ee385fefd0ec8369
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M legacy/module.mk
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyNMSSM/module.mk
    M models/fmssm/module.mk
    M models/fmssmn/module.mk
    M src/module.mk
    M templates/module.mk.in

  Log Message:
  -----------
  name module names after the model, not after the library

This makes the phony build targets more intuitive, for example we now
have:

   make all-MSSM
   make clean-MSSM


  Commit: b2f6a663e6f83de19a1db8b32f13f5845d8b05db
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b2f6a663e6f83de19a1db8b32f13f5845d8b05db
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M config/list_sarah_model_files.sh.in

  Log Message:
  -----------
  simplify if statement


  Commit: 5c15941f570646a5292d9acca74e79bd9cc79066
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5c15941f570646a5292d9acca74e79bd9cc79066
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M config/list_sarah_model_files.sh.in

  Log Message:
  -----------
  Bugfix: search for model files in the sarah/ directory as well


  Commit: a93ce3fa7dfaf16560a28b287085805f7316a1e7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a93ce3fa7dfaf16560a28b287085805f7316a1e7
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-04 (Fri, 04 Apr 2014)

  Changed paths:
    M sarah/MSSMRHN/particles.m

  Log Message:
  -----------
  Add PDG codes of right-handed (s)neutrinos


  Commit: cdd523f3cae57709ce62e17a6720a2c92fe80913
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cdd523f3cae57709ce62e17a6720a2c92fe80913
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M config/list_sarah_model_files.sh.in

  Log Message:
  -----------
  explain sub-model syntax and add two example calls


  Commit: 01bcc422eb8b1060e13ef524c7aac4b37dea644f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/01bcc422eb8b1060e13ef524c7aac4b37dea644f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M config/list_sarah_model_files.sh.in

  Log Message:
  -----------
  check if SARAH was loaded correctly


  Commit: 8d1759bad1f62ed3a135b9ac46d394f7826a941d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8d1759bad1f62ed3a135b9ac46d394f7826a941d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M config/list_sarah_model_files.sh.in

  Log Message:
  -----------
  do not hard-code the local sarah/ directory in the shell script


  Commit: 24dc9f32d52095a10cbdf30b6029ed80a2b6218d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/24dc9f32d52095a10cbdf30b6029ed80a2b6218d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  document how to enable the two-loop corrections in the (N)MSSM


  Commit: 1289c1a00ba61dd70f6b6c60a4b04438b8f71bbb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1289c1a00ba61dd70f6b6c60a4b04438b8f71bbb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove "Not yet implemented" remarks from the paper


  Commit: 08461f27e8574f275cd0226ead494727f121270c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/08461f27e8574f275cd0226ead494727f121270c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  ensure g++ version checking for CXX

It is important that we check the version of CXX, not of CXX_DEP_GEN.
For CXX_DEP_GEN an older version might be sufficient.  For CXX we need
a recent version.


  Commit: bec06d258855dd65618be5bac697dbe8122bc3a5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bec06d258855dd65618be5bac697dbe8122bc3a5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  reformulate calculation of pole masses


  Commit: 47cef7057876951b83ade170d1dcee84c7074585
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/47cef7057876951b83ade170d1dcee84c7074585
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add note about GUT normalization of the gauge couplings in FS


  Commit: c915e25b57384a6d84f426f14af0bdf036bcbea5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c915e25b57384a6d84f426f14af0bdf036bcbea5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting display of the Mu parameter in the code snippets


  Commit: 5212c8c6b1220332ee89adec2e43ffbdf15966b5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5212c8c6b1220332ee89adec2e43ffbdf15966b5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-05 (Sat, 05 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting display of the Lambda parameter in the code snippets


  Commit: 01a2120f62b00984c1c7a2e1562dcb9cf15cd1b5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/01a2120f62b00984c1c7a2e1562dcb9cf15cd1b5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-06 (Sun, 06 Apr 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  correcting misleading comment


  Commit: 4c7c8ecadd5e359ea886d3c4ba6534291186d783
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4c7c8ecadd5e359ea886d3c4ba6534291186d783
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/betafunction.cpp
    M src/rk.hpp
    M src/slha_io.cpp
    M src/slha_io.hpp
    M templates/slha_io.cpp.in

  Log Message:
  -----------
  replace C++11 functional classes by boost classes


  Commit: 7906fbaadf4e25e3a765c12acc2f002a3636fb2f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7906fbaadf4e25e3a765c12acc2f002a3636fb2f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/mycomplex.h

  Log Message:
  -----------
  g++ 4.4 compatibility fix


  Commit: aad1e3545e6d19a7d9c3f6e15549b67c4f4fc372
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/aad1e3545e6d19a7d9c3f6e15549b67c4f4fc372
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/linalg2.hpp

  Log Message:
  -----------
  src/linalg2.hpp: replace nested template brackets `>>' by `> >'


  Commit: e5c388e9f4d80aede9a95122dfea3ed25799706d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e5c388e9f4d80aede9a95122dfea3ed25799706d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/linalg2.hpp

  Log Message:
  -----------
  src/linalg2.hpp: avoid C++11 keywords nullptr and constexpr


  Commit: bfa6bc4458d31d2b3d82f15100dafbec240f26db
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bfa6bc4458d31d2b3d82f15100dafbec240f26db
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/linalg2.hpp

  Log Message:
  -----------
  src/linalg2.hpp: replace lambdas by function objects


  Commit: 6bb9e17bb41819b2d964416f309c19fa4508e555
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6bb9e17bb41819b2d964416f309c19fa4508e555
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M test/test_linalg2.cpp

  Log Message:
  -----------
  test/test_linalg2.cpp: eliminate C++11ism


  Commit: d736f90e6b56c92f271b870591f095534eb51ae9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d736f90e6b56c92f271b870591f095534eb51ae9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/scan.hpp

  Log Message:
  -----------
  make random number generator available after gcc 4.6


  Commit: 5eee669a11f3a8f244a1d9ee55dc3c9f4f54c990
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5eee669a11f3a8f244a1d9ee55dc3c9f4f54c990
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  adding helper string conversion function


  Commit: 6008cb6cd2daff422d4ed9c0856675f75e5b5d5a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6008cb6cd2daff422d4ed9c0856675f75e5b5d5a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  g++ 4.4 compatibility fix


  Commit: f602cd95cb1411fe86bd2fe1f237fa9c09a7f067
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f602cd95cb1411fe86bd2fe1f237fa9c09a7f067
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M src/slha_io.hpp

  Log Message:
  -----------
  replace to_string by ToString to avoid another C++11 feature


  Commit: 43366b366450ffe37d8dfceb6c480de2b6c3ecc8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/43366b366450ffe37d8dfceb6c480de2b6c3ecc8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  lower required g++ version to 4.4.7

Note: make all-test will not compile with g++ < 4.6 because it uses
the C++11 <chrono> header.


  Commit: 729832094d5f5f600bafb8bbfa1d98265a3e488a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/729832094d5f5f600bafb8bbfa1d98265a3e488a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M ChangeLog
    M README
    M doc/chapters/overview.tex
    M doc/paper.tex

  Log Message:
  -----------
  document minimum required g++ version (4.4.7)


  Commit: 9d2b32322d24de6936a8027267221f762a3dc56a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9d2b32322d24de6936a8027267221f762a3dc56a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  enable only two_scale algorithm by default


  Commit: a313c3521158cfd968b49c273f26cfe6424de5f4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a313c3521158cfd968b49c273f26cfe6424de5f4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  add debug output for the checking of the used RGE solver algorithms


  Commit: 2ff3eab69f7f975af1ffa16da2cf502fce9d16ae
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2ff3eab69f7f975af1ffa16da2cf502fce9d16ae
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M config/config.h.in
    M configure
    M src/scan.hpp

  Log Message:
  -----------
  determine availability of <random> header in configure


  Commit: 7156df5319f4a7c11011c8d3ca886fccfbd1f351
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7156df5319f4a7c11011c8d3ca886fccfbd1f351
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  define ENABLE_* macros to 1 to support usage in if() statements


  Commit: 3185e6ca1880d052da90975aba206c21b218ab37
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3185e6ca1880d052da90975aba206c21b218ab37
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-07 (Mon, 07 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  readability improvement


  Commit: df1d9ffd6e2f0d4b9b6843dfa9f80c498d44017d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/df1d9ffd6e2f0d4b9b6843dfa9f80c498d44017d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-08 (Tue, 08 Apr 2014)

  Changed paths:
    A sarah/MSSMNoFV/MSSMNoFV.m
    A sarah/MSSMNoFV/parameters.m
    A sarah/MSSMNoFV/particles.m

  Log Message:
  -----------
  adding MSSM model file without flavour violation

based on Florian's MSSM-NoFv


  Commit: c5a36ca856d7ab9d74b6fc08d8f2b11c9cbbc8cf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c5a36ca856d7ab9d74b6fc08d8f2b11c9cbbc8cf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-08 (Tue, 08 Apr 2014)

  Changed paths:
    A model_files/MSSMNoFV/FlexibleSUSY.m.in

  Log Message:
  -----------
  adding MSSMNoFV FlexibleSUSY model file


  Commit: 83896a64d75f70b93b533ca4e8a466fa7aa84ad8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/83896a64d75f70b93b533ca4e8a466fa7aa84ad8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-08 (Tue, 08 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Bugfix: always require LAPACK for linalg2.hpp


  Commit: 89af524e615bcb201299260f545971f5080864e3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/89af524e615bcb201299260f545971f5080864e3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-09 (Wed, 09 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  check for random number generator by compiling a test program

This feature check is indepenend of the compiler.


  Commit: 5a9c01e20cccd4045555d35cfd56277b263b6586
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5a9c01e20cccd4045555d35cfd56277b263b6586
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: check icpc version


  Commit: 6d4d4ce043adf96db83dcb344d351aec4a4cdcba
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6d4d4ce043adf96db83dcb344d351aec4a4cdcba
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Pass -std=c++0x to icpc older than version 13.0


  Commit: 3200f68ea8c82c2ee6741187588e0cba2c812daf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3200f68ea8c82c2ee6741187588e0cba2c812daf
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  README: lower required icpc version to 12.1


  Commit: 0039127729b042cc884488ad174f12f88f13a504
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0039127729b042cc884488ad174f12f88f13a504
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  restrict visibility of vevs


  Commit: 8f9ef0da596e31bce8ab9c1e1d425eb209f3e429
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8f9ef0da596e31bce8ab9c1e1d425eb209f3e429
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M meta/EWSB.m
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  name tree-level ewsb eqs. according to Higgs boson


  Commit: 52202a1f3a3d7d40bde8e68f262edb35815f98f8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/52202a1f3a3d7d40bde8e68f262edb35815f98f8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/SelfEnergies.m

  Log Message:
  -----------
  eliminate use of VEVs in the Higgs--EWSB eq. association function


  Commit: 6a143345c20560a66a40ae0a12dea9b256378cf5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6a143345c20560a66a40ae0a12dea9b256378cf5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M test/test_MSSM.hpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_susy_scale_constraint.cpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  renaming function name in the test modules


  Commit: 4443e3290e74d0cb9ab82941349b73b247cde4fd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4443e3290e74d0cb9ab82941349b73b247cde4fd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M meta/SelfEnergies.m

  Log Message:
  -----------
  rename parameter


  Commit: 1f0d3a3020a9a1d54a547b06fa655e22bb63d344
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1f0d3a3020a9a1d54a547b06fa655e22bb63d344
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-10 (Thu, 10 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  catch case where the VEV list contains an extra phase


  Commit: 3fd26999e4da6089b1de8e90264aa4d4533a6cc5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3fd26999e4da6089b1de8e90264aa4d4533a6cc5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  associate Higgs <-> EWSB eq. according to sigma and phi


  Commit: 18e826e5fc86e564d83834cf75da559bd6b616fe
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/18e826e5fc86e564d83834cf75da559bd6b616fe
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M meta/SelfEnergies.m
    M test/test_MSSM.hpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_susy_scale_constraint.cpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  Merge branch 'bugfix-vev-number' into development


  Commit: b2aad2b3257a5d3b5488c205994550b749321e71
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b2aad2b3257a5d3b5488c205994550b749321e71
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    A model_files/MSSMCPV/FlexibleSUSY.m.in

  Log Message:
  -----------
  adding FlexibleSUSY model file for the CPV MSSM

Note: The CPV MSSM has a complex phase `eta' as input parameter.  This
will result in complex Yukawa couplings etc.  However, complex model
parameters (Yukawa couplings etc.) are not yet supported.  Therefore,
the CPV MSSM will not yet compile.


  Commit: fa828f623dc55cb1412ababab5a643e8d0b9c48e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fa828f623dc55cb1412ababab5a643e8d0b9c48e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 8f3443956b52c733993ba57f68d9e95974872c37
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8f3443956b52c733993ba57f68d9e95974872c37
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M meta/CConversion.m

  Log Message:
  -----------
  convert Complex[] to std::complex<double>()

This conversion is necessary becaus we cannot define a typedef as

  typedef std::complex<double> Complex

because it would conflict with class Complex in mycomplex.h


  Commit: 2428f052f5cb8176bf7f281d7e210e7d56517ba7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2428f052f5cb8176bf7f281d7e210e7d56517ba7
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: add termination handler

To remove temporary files when script terminates due to interruption
as well as normally.  This also reduces the number of `rm -f'
commands.


  Commit: d4ed071788077abc070ae455bcbaba8a9fbcd575
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d4ed071788077abc070ae455bcbaba8a9fbcd575
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: avoid putting \n in a message

Bash builtin echo does not translate \n while dash echo does.


  Commit: a4b24f67725834c150f0c377ed9b25c7b374cf62
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a4b24f67725834c150f0c377ed9b25c7b374cf62
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: add version utilities


  Commit: b61b624f2686af99df5f8908df1b24c29b01dbb6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b61b624f2686af99df5f8908df1b24c29b01dbb6
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: refactor C++ test compilation routine


  Commit: 271a156ccbaf9310c321e0c73bb1ff8dbb854409
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/271a156ccbaf9310c321e0c73bb1ff8dbb854409
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-11 (Fri, 11 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: refactor version and compiler type checking routines


  Commit: 343a88918265ed371fa329f0806aaa4e04fa8506
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/343a88918265ed371fa329f0806aaa4e04fa8506
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  Print warning if low-scale is not set to SM[MZ]

Currently only SM[MZ] is supported.  At some point we will replace
QedQcd by something more general, which will then allow for different
scales.


  Commit: 73afe444693b5902d63326086c3eefa6432c7aa0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73afe444693b5902d63326086c3eefa6432c7aa0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m

  Log Message:
  -----------
  rename function (remove loop order in function name)


  Commit: 0690dbdb7ae115ef3b35619310cb92b66adaa782
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0690dbdb7ae115ef3b35619310cb92b66adaa782
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m

  Log Message:
  -----------
  Bugfix: thread-safety in the calculation of the Higgs pole-masses

The two-loop routines from Slavich are not thread-save.  Therefore, if
these two-loop routines are enabled (via UseHiggs2LoopMSSM or
UseHiggs2LoopNMSSM) the functions

  calculate_MAh_pole
  calculate_Mhh_pole

have to be calculated sequentially in the same thread (= main thread
here).


  Commit: 34173a15d97e84bfd628d55e741ad3ec1414680d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/34173a15d97e84bfd628d55e741ad3ec1414680d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  rename function


  Commit: ea5771fb5fc799199086ce9bb5b5b5b4cf809382
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea5771fb5fc799199086ce9bb5b5b5b4cf809382
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m

  Log Message:
  -----------
  reverting commit 0690dbd


  Commit: 2de2dbab6e9ae5ec5e64c73ed35bb066787936d1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2de2dbab6e9ae5ec5e64c73ed35bb066787936d1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  define mutex in model class


  Commit: fcf69f1c2cea6da00c46729c3bdeeeca75be3ecb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fcf69f1c2cea6da00c46729c3bdeeeca75be3ecb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  we don't need the mutex definition in the meta code


  Commit: cd2412ecfa85fbf1cbd18d0be22904a0cbd997f7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cd2412ecfa85fbf1cbd18d0be22904a0cbd997f7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  lock and unlock mutex around fortran function calls


  Commit: 534dc6ea4b31e5f5d7d61e49218cde5f41c8d098
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/534dc6ea4b31e5f5d7d61e49218cde5f41c8d098
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-12 (Sat, 12 Apr 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  a std::mutex is enough, no need for std::recursive_mutex


  Commit: 46db574d7e67d3cdba591fa8f1aecb2d13b7be1c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/46db574d7e67d3cdba591fa8f1aecb2d13b7be1c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Show required boost version


  Commit: 769e7a63805dcbd122c7f35bad7d71a182ca8a3e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/769e7a63805dcbd122c7f35bad7d71a182ca8a3e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Separate required C++ compiler and dep_gen versions


  Commit: 73750e852e389d0e40de6d8558e8f0f277661742
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73750e852e389d0e40de6d8558e8f0f277661742
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Bugfix: check C++ compiler and dep_gen versions independently


  Commit: 91c43f6631d67ba561ada3158e36f92573a5cd2e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/91c43f6631d67ba561ada3158e36f92573a5cd2e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Determine C++ compiler type/version without test compilation


  Commit: 6a336b1ae6042f9b0cab44a4662d0a36610676da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6a336b1ae6042f9b0cab44a4662d0a36610676da
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: remove unused variables


  Commit: 46549db01b8863b79146a6a676034902375ef297
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/46549db01b8863b79146a6a676034902375ef297
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Refactor C++ compiler type checking routines


  Commit: 9be7e4c9b67595335218f808dd5c8f2b59a2d61a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9be7e4c9b67595335218f808dd5c8f2b59a2d61a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M meta/TestSuite.m

  Log Message:
  -----------
  make meta code test summary look more like the BOOST output


  Commit: 07c4d1cb17b930f77a6a2e2406b16d28ea8a9f7c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/07c4d1cb17b930f77a6a2e2406b16d28ea8a9f7c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M config/Makefile.standalone.in
    M config/Makefile.tower.in

  Log Message:
  -----------
  include header files from config/


  Commit: d0f08d095b6dac2b317664f11c825929b1d4d97b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d0f08d095b6dac2b317664f11c825929b1d4d97b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  check for platfrom and machine word size first


  Commit: 4f08457479cb8a397490005f401378cf7f6c4fc7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4f08457479cb8a397490005f401378cf7f6c4fc7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  log package information


  Commit: 1a1ea7416a50020c853db8cbb32855d81f12824b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1a1ea7416a50020c853db8cbb32855d81f12824b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Fix separator matching in config.log


  Commit: b367d4d900a6f831c9dc927025eaab7b05d168fc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b367d4d900a6f831c9dc927025eaab7b05d168fc
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Merge branch 'bugfix-configure' into development


  Commit: 6903340726f06a2df3a6053fed6860699ec60050
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6903340726f06a2df3a6053fed6860699ec60050
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: print C++ compiler version checking message before checking it


  Commit: 0d4e2b88ea4e21256ec67e0a1367298cf80f40bb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0d4e2b88ea4e21256ec67e0a1367298cf80f40bb
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: exit on interruption


  Commit: e757a6620d8eee2044616342d87680d01583398b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e757a6620d8eee2044616342d87680d01583398b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: simplify trap commands


  Commit: 4e488d16c80f77c902f90b108392983d6d01feb7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4e488d16c80f77c902f90b108392983d6d01feb7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M src/build_info.cpp

  Log Message:
  -----------
  print more build information: LoopTools and multi-threading


  Commit: 0c589e6e77e2b6a15fdea5a5e36361f5704b9e2d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0c589e6e77e2b6a15fdea5a5e36361f5704b9e2d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M src/command_line_options.cpp

  Log Message:
  -----------
  improve wording of user help message


  Commit: 6e4e838874b9d78733684d2749770a24a7b719e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6e4e838874b9d78733684d2749770a24a7b719e6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-13 (Sun, 13 Apr 2014)

  Changed paths:
    M test/module.mk
    A test/test_MSSM_info.cpp

  Log Message:
  -----------
  adding test for the MSSM_info::Parameters enum order


  Commit: b5b9c439050fd55364fcf0f0ad2dbc62b2e38300
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b5b9c439050fd55364fcf0f0ad2dbc62b2e38300
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-14 (Mon, 14 Apr 2014)

  Changed paths:
    M test/test_MSSM_info.cpp

  Log Message:
  -----------
  simplify tests (here is to the preprocessor macro!)


  Commit: 9eb3e45b3344fdb7a1930bc9cdcbfd182513f182
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9eb3e45b3344fdb7a1930bc9cdcbfd182513f182
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-14 (Mon, 14 Apr 2014)

  Changed paths:
    M test/test_MSSM_info.cpp

  Log Message:
  -----------
  using (pseudo) random numbers for the test


  Commit: 54fce83e387f883ebe766972b2373930926356b0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/54fce83e387f883ebe766972b2373930926356b0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-14 (Mon, 14 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  log #define statements in config.h


  Commit: e66e7560f13e05d0fd45440aed76e9fc6d699e4c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e66e7560f13e05d0fd45440aed76e9fc6d699e4c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-14 (Mon, 14 Apr 2014)

  Changed paths:
    M test/module.mk
    A test/test_Vertices.m

  Log Message:
  -----------
  Add color summation tests

See commit 3f41d47af54be30d38d3d4464ddbf915ff6a5d23 .


  Commit: 858d2623d6fc4eb743e2e79c531bffdd80a93b82
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/858d2623d6fc4eb743e2e79c531bffdd80a93b82
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-15 (Tue, 15 Apr 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  Quit with error message if LowScale =!= SM[MZ]


  Commit: bc56e04bb6278c54ffd5aa474a1ca1b72d3bf516
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bc56e04bb6278c54ffd5aa474a1ca1b72d3bf516
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-04-15 (Tue, 15 Apr 2014)

  Changed paths:
    M legacy/module.mk
    M src/module.mk
    M templates/module.mk.in
    M test/module.mk

  Log Message:
  -----------
  `make clean' should delete dependency files as well


  Commit: ba56d52bb65204b8ad9f6196ddb7e95c1fb5e73d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ba56d52bb65204b8ad9f6196ddb7e95c1fb5e73d
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-04-15 (Tue, 15 Apr 2014)

  Changed paths:
    M config/Makefile.standalone.in
    M config/Makefile.tower.in
    M examples/module.mk
    M legacy/module.mk
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyNMSSM/module.mk
    M models/fmssm/module.mk
    M models/fmssmn/module.mk
    M src/module.mk
    M templates/module.mk.in
    M test/module.mk

  Log Message:
  -----------
  `make clean' should delete libs and executables as well


  Commit: bcf202d555472182822eb47d3ef3273eccd0ff6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bcf202d555472182822eb47d3ef3273eccd0ff6e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M configure

  Log Message:
  -----------
  add --with-install-dir= configure option


  Commit: 7acbc60dccfcf84f59e9a0ce435f0612247cc025
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7acbc60dccfcf84f59e9a0ce435f0612247cc025
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  add install-src target

It creates the source code (`allsrc' target) if ENABLE_META == yes.
Afterwards it will create the install directory.


  Commit: b0d5c314319c4c40be4ed3eebe5502cb58111741
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b0d5c314319c4c40be4ed3eebe5502cb58111741
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  keep relative path of installation dir

This gives more freedom to the user in case the FlexibleSUSY direcory
is moved.


  Commit: 706d087b49e16fc048a9a8b2e988e06069461d50
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/706d087b49e16fc048a9a8b2e988e06069461d50
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M src/module.mk

  Log Message:
  -----------
  implement install-src target in the src/ module


  Commit: eac2570ca116413937628ae1b7dee9fe84431789
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/eac2570ca116413937628ae1b7dee9fe84431789
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M src/module.mk

  Log Message:
  -----------
  use install instead of cp, and install -d instead of mkdir -p


  Commit: ac008495d1696755fc2dd5092ca15f5a24383c50
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ac008495d1696755fc2dd5092ca15f5a24383c50
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  checking for avaliability of `install'


  Commit: dd5ef0985ad366165a5f9cf0345025f4d691ecba
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dd5ef0985ad366165a5f9cf0345025f4d691ecba
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M src/module.mk

  Log Message:
  -----------
  print error message if installation directory is not set


  Commit: febebcbdfad4a2d712855c95dc528bec1c909b0c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/febebcbdfad4a2d712855c95dc528bec1c909b0c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  do not include dependency files for install-src target


  Commit: f20b80362c8756105753fa6ff94ee1e84bdb9087
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f20b80362c8756105753fa6ff94ee1e84bdb9087
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/module.mk
    M legacy/module.mk
    M slhaea/module.mk
    M templates/module.mk.in

  Log Message:
  -----------
  install config, legacy, slhaea and the model files


  Commit: 4611b9c3a47941d4aa58b400bdfc2b7725b2f7aa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4611b9c3a47941d4aa58b400bdfc2b7725b2f7aa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/module.mk
    M legacy/module.mk
    M slhaea/module.mk
    M src/module.mk
    M templates/module.mk.in

  Log Message:
  -----------
  set access rights the same as source


  Commit: 10560f27dd445ea4d99add4923f721743df51bdd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/10560f27dd445ea4d99add4923f721743df51bdd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/module.mk
    M legacy/module.mk
    M slhaea/module.mk
    M src/module.mk
    M templates/module.mk.in

  Log Message:
  -----------
  correcting access righs to u=rw,g=r,o=r


  Commit: 1acabc4b77e62b9d45935f61e3261e7c6b70d681
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1acabc4b77e62b9d45935f61e3261e7c6b70d681
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  install doc module


  Commit: 1682286ca54eb09d7e5b1ee16f8c96a2be53f97e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1682286ca54eb09d7e5b1ee16f8c96a2be53f97e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-16 (Wed, 16 Apr 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  invoke error only if install-src target is called


  Commit: 0e3944b8ed2383c09f50dc0c21516ecc068c9e95
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0e3944b8ed2383c09f50dc0c21516ecc068c9e95
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    A config/remove_export_markers.sh

  Log Message:
  -----------
  add script that removes marked lines from file or stdin


  Commit: a91a06880a21810c79da397242e4e037384fe5db
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a91a06880a21810c79da397242e4e037384fe5db
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  improve readability in the error message


  Commit: a6141d4134a15202f2661329194590225f6e8b9e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a6141d4134a15202f2661329194590225f6e8b9e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  do not create standalone makefile in the exported version


  Commit: 5b6b41afdcb08883582081f0bf815e057ca11a38
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5b6b41afdcb08883582081f0bf815e057ca11a38
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  export doc/module.mk


  Commit: c56a2585a3e1a55a114aa8efbe1411eb0075c21a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c56a2585a3e1a55a114aa8efbe1411eb0075c21a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    A config/install_stripped.sh

  Log Message:
  -----------
  adding helper script which installs a file, w/o export markers


  Commit: e4cb6c961587a92ed1e0ef593205846171aa06f1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e4cb6c961587a92ed1e0ef593205846171aa06f1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M config/module.mk

  Log Message:
  -----------
  installing stripped versions of configure and Makefile.in


  Commit: 73992a08ebc7603010bcedf47982d4f3e88a1fde
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73992a08ebc7603010bcedf47982d4f3e88a1fde
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  Bugfix: ensure MATHEMATICA_VERSION is a number


  Commit: ce22cfe5fd84605c631e9799a4f194867d5cb294
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ce22cfe5fd84605c631e9799a4f194867d5cb294
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M meta/Constraint.m
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  check for unset Yukawa couplings in the initial guess


  Commit: 72e8c5d9a95014e5940990f310d9e08855444f84
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/72e8c5d9a95014e5940990f310d9e08855444f84
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M templates/module.mk.in

  Log Message:
  -----------
  export generated makefile modules two_scale_*.mk


  Commit: 7f94e90d2ff654ba970f667834094f24e686025b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7f94e90d2ff654ba970f667834094f24e686025b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  remove --enable/disable-meta and --with-math-cmd from configure

for the exported configure file


  Commit: da6316fbe287430b7006b3f8b7452a3c3378d52c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/da6316fbe287430b7006b3f8b7452a3c3378d52c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M configure
    M meta/Constraint.m
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  Merge branch 'development' into feature-install-src


  Commit: e40a8e40b82e77efe2db0574e83be284e52e907e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e40a8e40b82e77efe2db0574e83be284e52e907e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  remove doc/version.tex on make distclean


  Commit: a10d654cdcd72e8c0afa45b9687ff90d9438c8cc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a10d654cdcd72e8c0afa45b9687ff90d9438c8cc
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M model_files/lowMSSM/LesHouches.in.lowMSSM

  Log Message:
  -----------
  comment out mHu2 and mhd2 entries in MSOFTIN - these are EWSB oputputs and are ignored.


  Commit: d23871da48e3f241882486bbf7ee866a029e0359
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d23871da48e3f241882486bbf7ee866a029e0359
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M templates/module.mk.in

  Log Message:
  -----------
  clean-<model>-src must remove headers and .mk files as well


  Commit: 6aeb4f6177710afd42d20dd0c1755fdfefa573c4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6aeb4f6177710afd42d20dd0c1755fdfefa573c4
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M model_files/lowMSSM/LesHouches.in.lowMSSM

  Log Message:
  -----------
  deleted mHu2 and mHd2 from lowMSSM les houches file since theya re EWSB outputs.


  Commit: 326175ce43babea5fc9b2af68fba72d2cd0bfabd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/326175ce43babea5fc9b2af68fba72d2cd0bfabd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M config/install_stripped.sh

  Log Message:
  -----------
  Bugfix: correcting file name in case destination is a directory


  Commit: 2c9139f867452c471ed3240e0f9e0246a25c2970
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2c9139f867452c471ed3240e0f9e0246a25c2970
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M templates/module.mk.in

  Log Message:
  -----------
  remove .gnuplot files and do not export clean-<model>-src target


  Commit: de88be1456bcd82a6b533284d571577ae2d6b336
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/de88be1456bcd82a6b533284d571577ae2d6b336
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M templates/module.mk.in

  Log Message:
  -----------
  avoid writing the generated source file twice


  Commit: 4c8b0ef3977fd69f8cbafdc37ffc97a659a9c743
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4c8b0ef3977fd69f8cbafdc37ffc97a659a9c743
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M config/module.mk

  Log Message:
  -----------
  export helper scripts to allow recursive calls to install-src

Now, the source code, which is exported via install-src, can call
`make install-src` agrain.


  Commit: 594376f86631964b2db615816f8a04eff3ef82af
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/594376f86631964b2db615816f8a04eff3ef82af
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M config/remove_export_markers.sh

  Log Message:
  -----------
  Add a missing * in config/remove_export_markers.sh


  Commit: 3c1deca2862013dc728f522387c6798b5b0e73a2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3c1deca2862013dc728f522387c6798b5b0e73a2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  explain allowed constraint forms


  Commit: 09122d7771102facb2c15406e8d084a3463f87a3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/09122d7771102facb2c15406e8d084a3463f87a3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  update the example model file

The calculation of the Yukawa couplings must defined explicitely.


  Commit: 565200b48fe0003830de7c709a6081d717ce11d4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/565200b48fe0003830de7c709a6081d717ce11d4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  export documentation files


  Commit: 995b884f4f641c9bccafff8749fd058ecbf32e17
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/995b884f4f641c9bccafff8749fd058ecbf32e17
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M config/remove_export_markers.sh

  Log Message:
  -----------
  Simplify config/remove_export_markers.sh


  Commit: 419e42f9d3fe411be12bf382992af732b1da2607
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/419e42f9d3fe411be12bf382992af732b1da2607
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: e81db00e9f5ba6a727eb02e96801ebbf2c84f412
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e81db00e9f5ba6a727eb02e96801ebbf2c84f412
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  document the new export feature


  Commit: 47159f57e19b14722ee0179484b8453c2300428f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/47159f57e19b14722ee0179484b8453c2300428f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M config/remove_export_markers.sh

  Log Message:
  -----------
  Revert "Simplify config/remove_export_markers.sh"

This reverts commit 995b884f4f641c9bccafff8749fd058ecbf32e17.
--
However, you removed a subtile feature: When calling

   ./config/remove_export_markers.sh

(i.e. without any arguments) the script will stuck.  In the previous
version I catched this this by the following if condition:

   if [ ! -t 0 ]; then
      # do not wait for more stdin
   fi

Would you mind adding such a condition again, please?  The reason is
that this script is called inside make like this

  ./config/remove_export_markers.sh $(SOME_VARIABLE)

And in the stupid case where $(SOME_VARIABLE) is empty (for what
reason what so ever), make will stuck, because the script stucks.

Sorry, if I'm too pedantic here.  :)

Best,
Alex


  Commit: a59c9613f2633500e80ba18dc1e73098d035b94e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a59c9613f2633500e80ba18dc1e73098d035b94e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-17 (Thu, 17 Apr 2014)

  Changed paths:
    M ChangeLog
    M README
    M config/Makefile.in
    A config/install_stripped.sh
    M config/module.mk
    A config/remove_export_markers.sh
    M configure
    M doc/module.mk
    M legacy/module.mk
    M slhaea/module.mk
    M src/module.mk
    M templates/module.mk.in

  Log Message:
  -----------
  Merge branch 'feature-install-src' into development


  Commit: 7bce4371e0be1ca0635713bbd689dabfa20c0203
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7bce4371e0be1ca0635713bbd689dabfa20c0203
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-18 (Fri, 18 Apr 2014)

  Changed paths:
    A sarah/EZSSM/EZSSM.m
    A sarah/EZSSM/parameters.m
    A sarah/EZSSM/particles.m

  Log Message:
  -----------
  adding EZSSM sarah model files.


  Commit: 638578afed07aadd4d5d025b4e737fbc8ac56d68
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/638578afed07aadd4d5d025b4e737fbc8ac56d68
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-18 (Fri, 18 Apr 2014)

  Changed paths:
    R sarah/EZSSM/EZSSM.m
    R sarah/EZSSM/parameters.m
    R sarah/EZSSM/particles.m

  Log Message:
  -----------
  Revert "adding EZSSM sarah model files."

This reverts commit 7bce4371e0be1ca0635713bbd689dabfa20c0203.

Reverting because I should really do this in sepearte branch first.


  Commit: f1e20856f40323c6187345b8f86f937080708072
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f1e20856f40323c6187345b8f86f937080708072
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-18 (Fri, 18 Apr 2014)

  Changed paths:
    A BUGS

  Log Message:
  -----------
  adding BUGS file with known problems


  Commit: 852a6d70b65531f6257e539910a23a872aa113da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/852a6d70b65531f6257e539910a23a872aa113da
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M config/config.h.in
    M configure

  Log Message:
  -----------
  adding printout mode #define statements to config.h


  Commit: 0213ecd1c7c127b3af2c2f415c2e1056c83d55da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0213ecd1c7c127b3af2c2f415c2e1056c83d55da
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M src/numerics.cpp
    M src/rge.cpp

  Log Message:
  -----------
  remove commented code


  Commit: 70286e6a3ab7a89ff5dcf0c89f1c9b3a6948e234
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/70286e6a3ab7a89ff5dcf0c89f1c9b3a6948e234
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M legacy/diagonalization.cpp
    M meta/Constraint.m
    M src/lattice_solver.cpp
    M src/logger.hpp
    M src/minimizer.hpp
    M src/rk.cpp
    M src/root_finder.hpp
    M src/sfermions.cpp
    M src/two_scale_constraint.hpp
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_model.cpp.in
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_logger.cpp
    M test/test_two_scale_mssm_solver.cpp

  Log Message:
  -----------
  rename defined symbols to new convention


  Commit: 32677d065648a0056694a7f16340842f6c18ff22
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/32677d065648a0056694a7f16340842f6c18ff22
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M src/logger.hpp

  Log Message:
  -----------
  include config.h in logger.hpp


  Commit: 6e09538d1e3d258b029e566df1a2db0c3f235f81
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6e09538d1e3d258b029e566df1a2db0c3f235f81
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  remove preprocessor definitions from CPPFLAGS


  Commit: 56298910d64eeaadfec1a2e8472f3539eef134f3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/56298910d64eeaadfec1a2e8472f3539eef134f3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M src/logger.hpp

  Log Message:
  -----------
  correcting and improving logger macro description


  Commit: 34c2e714cf298f605973c2e5c6101d1d5c6e9ad9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/34c2e714cf298f605973c2e5c6101d1d5c6e9ad9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  creating md5 sum together with the release tarball


  Commit: 4a23ed3c32951adf44cfb7a94a95d92dddd8bd3c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4a23ed3c32951adf44cfb7a94a95d92dddd8bd3c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M model_files/UMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  add NMSSM-like two-loop Higgs contributions to the UMSSM


  Commit: 50b7c1c0719ea1a94b149c3245eaab3236edf98b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/50b7c1c0719ea1a94b149c3245eaab3236edf98b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  add NMSSM-like two-loop Higgs contributions to the E6SSM


  Commit: f83665f7ce108bf1456d8d1bd5778a5347ef0ff3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f83665f7ce108bf1456d8d1bd5778a5347ef0ff3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-19 (Sat, 19 Apr 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  create non-annotated tags

The release process works as follows:

 1. Create a commit where the the version number (in configure) is
    updated.  This commit should have the commit message

      version <version>

    where <version> is of the form x.y.z with x = major, y = minor, z
    = patch level.

 2. Run configure

      ./configure --disable-meta --disable-compile --with-models-=

 3. Create a non-annotated tag via

      make tag

    A tarball and a correspondin .md5 file will be created.


  Commit: 033c63669be2b9dc6e995e64074f1a067de10037
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/033c63669be2b9dc6e995e64074f1a067de10037
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M legacy/conversion.cpp
    M legacy/conversion.hpp
    M legacy/diagonalization.cpp
    M legacy/diagonalization.hpp

  Log Message:
  -----------
  adding copying note to legacy modules


  Commit: 45106ecb6e80d010ddf2f0d7a1d41befb7c6532e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/45106ecb6e80d010ddf2f0d7a1d41befb7c6532e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  add general FS information to the README file


  Commit: bd0fe3ac0690ade989b26b6d4ffb331347a70a48
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bd0fe3ac0690ade989b26b6d4ffb331347a70a48
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M BUGS

  Log Message:
  -----------
  add bug report page to BUGS file


  Commit: 56e84383e5928eaafe7521aff158ff9bb035aa6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/56e84383e5928eaafe7521aff158ff9bb035aa6e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M config/config.h.in
    M configure

  Log Message:
  -----------
  allow for extra version tag

This is especially useful when releasing beta versions or versions for
special purposes.


  Commit: a8421c21775a4aeaf41157ab24060fcf5aa9608e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a8421c21775a4aeaf41157ab24060fcf5aa9608e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  skip checking for models if $MODELS is empty


  Commit: 48838d028e6dc4d2544680b72afc9db46df3e5be
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/48838d028e6dc4d2544680b72afc9db46df3e5be
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  skip checking for algorithms if $ALGORITHMS is empty


  Commit: f032e01f9a1ee27dd45c785e7e486720c2cc4a32
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f032e01f9a1ee27dd45c785e7e486720c2cc4a32
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    A doc/release

  Log Message:
  -----------
  adding file which desribes the release procedure


  Commit: a4ee4b54df581a0d7957d8861e823cdb866c39ce
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a4ee4b54df581a0d7957d8861e823cdb866c39ce
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M src/module.mk
    A src/pv.cpp
    A src/pv.hpp

  Log Message:
  -----------
  Add src/pv.[ch]pp providing interfaces to Passarino-Veltman functions

If LoopTools is in use, call ltini() before the first call, as
documented in the manual.

(cherry picked from commit 14fc386564c660e085a7b82cc058e18ccf955d07)

Conflicts:
	src/module.mk


  Commit: d567d98e1391d8a5690145604379f9b91a754f3c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d567d98e1391d8a5690145604379f9b91a754f3c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    A src/cextensions.hpp
    M templates/lattice_model.hpp.in

  Log Message:
  -----------
  src/cextensions.hpp: check for gcc to define function attribute macro

(cherry picked from commit 036cb8886b3e7b9398b2e8d601c72db296664972)

Conflicts:
	templates/lattice_model.hpp.in


  Commit: bb5bf032c2e720b1fcd8b9d802e82e4a769171a4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bb5bf032c2e720b1fcd8b9d802e82e4a769171a4
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-20 (Sun, 20 Apr 2014)

  Changed paths:
    M src/pv.cpp

  Log Message:
  -----------
  src/pv.cpp: call ltini() from constructor of an anonymous global object

(cherry picked from commit 91dff54c87391c2299195d002d447294c0866c3b)


  Commit: a324d943c98a4b229250ceacda0cca9fc25c1cbf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a324d943c98a4b229250ceacda0cca9fc25c1cbf
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M configure
    A fflite/defs.h
    A fflite/externals.h
    A fflite/ff.h
    A fflite/ffca0.F
    A fflite/ffcb0.F
    A fflite/ffcb1.F
    A fflite/ffcb2p.F
    A fflite/ffcli2.F
    A fflite/fferr.h
    A fflite/ffinit.F
    A fflite/fflite.hpp
    A fflite/ffthre.F
    A fflite/ffwarn.h
    A fflite/ffxa0.F
    A fflite/ffxb0.F
    A fflite/ffxb1.F
    A fflite/ffxb2p.F
    A fflite/ffxli2.F
    A fflite/ini.F
    A fflite/lt.h
    A fflite/module.mk
    A fflite/types.h

  Log Message:
  -----------
  Introduce fflite module that compute loop functions

The fflite module is a subset of the FF library that is adapted to and
distributed as part of LoopTools 2.8.  The purpose to extract this
subset from LoopTools was to have thread-safe loop function routines
that accept complex (and therefore also negative) mass^2 arguments.
Calls to fflite subroutines bypass the internal cache of LoopTools.
It is unclear whether this would lead to a performance gain or loss.

(cherry picked from commit 0a49050556bd8f67d27cd3e95a9ad0d8ce2a5238)

Conflicts:
	config/Makefile.in
	configure


  Commit: 81560dd310da1e6b6517d360b94f32b651cf18f2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/81560dd310da1e6b6517d360b94f32b651cf18f2
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M src/pv.cpp
    M src/pv.hpp
    M test/module.mk
    A test/test_pv.cpp

  Log Message:
  -----------
  src/pv.[ch]pp: add complex -> complex loop functions

Loop functions accepting complex mass^2 arguments become available if
LoopTools or fflite is in use.

Declare const or pure function attributes to advise gcc that there is a
possibility to omit redundant function calls.

(cherry picked from commit 53b014670b8c001bcdcee99e6575960b1e3bc7f2)


  Commit: 89bb0f59f833edc1f513d149c9329fd26c4dee9d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/89bb0f59f833edc1f513d149c9329fd26c4dee9d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M examples/module.mk
    M templates/module.mk.in
    M test/module.mk

  Log Message:
  -----------
  Link executables against libfflite if it is selected

(cherry picked from commit 07757c5cc71caaf535b7ba6fb43d7b8e1cb9b472)


  Commit: a98a9ad31d6cd04db41190d81b702bdbad59454f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a98a9ad31d6cd04db41190d81b702bdbad59454f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M configure

  Log Message:
  -----------
  Clean up configuration of fflite

ENABLE_FFLITE must be set before fflite is added to MODULES.

(cherry picked from commit 5cced817da561989c0388cd435537fac1feafa85)

Conflicts:
	config/Makefile.in
	configure


  Commit: e6821418f8b15a73f117fea5a579c43ac3979058
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e6821418f8b15a73f117fea5a579c43ac3979058
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M fflite/defs.h
    M fflite/externals.h
    M fflite/ff.h
    M fflite/ini.F
    M fflite/lt.h

  Log Message:
  -----------
  fflite: sync to LoopTools 2.10

(cherry picked from commit 3697d1590f829971134751726816912aa39692a9)


  Commit: a086804abfc96d24d9c5dbaba8adfc2ebf64c9c6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a086804abfc96d24d9c5dbaba8adfc2ebf64c9c6
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M fflite/ffca0.F
    M fflite/ffcb0.F
    M fflite/ffxa0.F
    M fflite/ffxb0.F

  Log Message:
  -----------
  fflite: restore documentation of arguments from original ff

(cherry picked from commit 9663997cc99ce5ffb10ef3c92a1cc217e20d3e2d)


  Commit: 49ba404f51d93258a7b5919b17a53b356b2f3a25
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/49ba404f51d93258a7b5919b17a53b356b2f3a25
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    A fflite/ffcc0.F
    R fflite/ffthre.F
    M fflite/module.mk

  Log Message:
  -----------
  fflite: rename ffthre.F to ffcc0.F as in LoopTools

(cherry picked from commit 0f3c59bc17f5e5a2637a6dc0c55226030fdeca52)


  Commit: 0a327d5c2b83c03176c5c195e9e7f00e9dbecdc0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0a327d5c2b83c03176c5c195e9e7f00e9dbecdc0
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M config/config.h.in
    M configure
    M src/pv.hpp

  Log Message:
  -----------
  configure: adapt ENABLE_FFLITE to new macro definition scheme


  Commit: e3f55e3ca48c6f9c3ec1e9160e892faaf03ffe10
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e3f55e3ca48c6f9c3ec1e9160e892faaf03ffe10
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M config/Makefile.in
    M config/Makefile.standalone.in
    M config/Makefile.tower.in
    M examples/module.mk
    M src/module.mk
    M templates/module.mk.in
    M test/module.mk

  Log Message:
  -----------
  Combine LOOPTOOLSLIBS and LIBFFLITE to LOOPFUNCLIBS

LOOPFUNCLIBS is a recursively expanded variable that is expanded
after fflite/module.mk sets $(LIBFFLITE).


  Commit: e1caa313afbaedf069618af4f47fe0f8323ef871
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e1caa313afbaedf069618af4f47fe0f8323ef871
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-04-21 (Mon, 21 Apr 2014)

  Changed paths:
    M src/build_info.cpp
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  Call loop functions from pv.hpp abstraction layer


  Commit: d13068eac08f3c1ff7f42d019920a1b5537a8c35
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d13068eac08f3c1ff7f42d019920a1b5537a8c35
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-22 (Tue, 22 Apr 2014)

  Changed paths:
    M doc/release

  Log Message:
  -----------
  note how to push the tag and the tarball


  Commit: 3b3d72a3d782983214e3926ce83882541655a5f9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3b3d72a3d782983214e3926ce83882541655a5f9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-22 (Tue, 22 Apr 2014)

  Changed paths:
    M .gitattributes

  Log Message:
  -----------
  do not export doc/release


  Commit: 0e3a681dfdce4b55b17d9872bd6f7eff13239ed4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0e3a681dfdce4b55b17d9872bd6f7eff13239ed4
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  tiny fix to abstract of paper.


  Commit: a7359a769b6002ce1b382033e92ad80e8e100cb6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a7359a769b6002ce1b382033e92ad80e8e100cb6
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  removed red comment in abstract.


  Commit: 08da787e08d540ee42c6e24834e1f324e3f3acd5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/08da787e08d540ee42c6e24834e1f324e3f3acd5
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Added some basic references to introduction.


  Commit: 3c3292314e8055594162d2a47554b39b71e7359e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3c3292314e8055594162d2a47554b39b71e7359e
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Added more refernces and fixed typos in introduction. many more to do.


  Commit: 53c07b80e6869684d1408a065b61b137c3d0e937
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/53c07b80e6869684d1408a065b61b137c3d0e937
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  More work on introduction, some restructuring and new refs.


  Commit: 9ee419ad26bf84c3fa9c6e0f17f8e7d4c6c3247d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9ee419ad26bf84c3fa9c6e0f17f8e7d4c6c3247d
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added refs for experimental results and praragraph selling FS.


  Commit: 6ab4eedc211082f7c036ec55c0b2a0232cb63b81
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6ab4eedc211082f7c036ec55c0b2a0232cb63b81
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added paragraph at end of introduction describing paper structure.
Changed this structure a little.


  Commit: fca3c94b5644ecded0964bdfa8d249ba8b8a4c1e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fca3c94b5644ecded0964bdfa8d249ba8b8a4c1e
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Small corrections, and merged the two paragraphs on recent experimental
motivations, cutting the last sentence which was essentially repeated in the paragraph immediately after.


  Commit: 47c1f8928ab01e710f51b0a1a8eb02c578c9fb5e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/47c1f8928ab01e710f51b0a1a8eb02c578c9fb5e
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  More tinkering mostly for readability.  Mentioned sarah as the competitor.


  Commit: 7b4ea8d6ed9dbe20f3d9ec791b2fe7b64695e00c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7b4ea8d6ed9dbe20f3d9ec791b2fe7b64695e00c
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Edited abstract for readability.


  Commit: b549bc5bf2c26336fdcf0670a84754de8848d877
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b549bc5bf2c26336fdcf0670a84754de8848d877
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Fixed names to be in one line, as opposed to split style copied from old softsusy.


  Commit: 401bfdcd502eb048413d3424b6e39077a76e9fb8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/401bfdcd502eb048413d3424b6e39077a76e9fb8
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  removed comment in program summary.
these should be checked though.


  Commit: ed35aae7ea739a40544b9a0f22a0ccd190104a89
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ed35aae7ea739a40544b9a0f22a0ccd190104a89
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-04-24 (Thu, 24 Apr 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  changed The Program --> Overview of the Program.  Added some extra parts and edited.


  Commit: c081b5f8eb809af8edb58816b326e05d293f5c61
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c081b5f8eb809af8edb58816b326e05d293f5c61
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-27 (Sun, 27 Apr 2014)

  Changed paths:
    M templates/scan.cpp.in
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  use two-loop corrections by default (if available)


  Commit: b6df555518848f5fa9971e4e71c811d75f271b15
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b6df555518848f5fa9971e4e71c811d75f271b15
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-27 (Sun, 27 Apr 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M test/test_MSSM_model.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_susy_scale_constraint.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  fix tests


  Commit: 096fb02e2d0637a87ad22a7b776a5a71dfb980a8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/096fb02e2d0637a87ad22a7b776a5a71dfb980a8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-04-27 (Sun, 27 Apr 2014)

  Changed paths:
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in

  Log Message:
  -----------
  no implicite reset of the model parameters in the initial guesser

Instead, call model.clear() explicitely before solver.solve().
This is much more transparent.


  Commit: 7a79bf529b05b90ba6873c6783c06fbe0332d99c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7a79bf529b05b90ba6873c6783c06fbe0332d99c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-01 (Thu, 01 May 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  clear output parameters if a serious problem has occured

A serious problem is a problem which leads to an invalid spectrum.  In
this case the output masses / mixing matrices should be set to zero to
avoid confusion on the user side.


  Commit: 833e40a1eb7f357de7c25773a2391299546a29eb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/833e40a1eb7f357de7c25773a2391299546a29eb
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-01 (Thu, 01 May 2014)

  Changed paths:
    M meta/ThresholdCorrections.m

  Log Message:
  -----------
  catch case where mass matrix could not be found


  Commit: e36bff776816a19be53338077103717342c57f78
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e36bff776816a19be53338077103717342c57f78
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-01 (Thu, 01 May 2014)

  Changed paths:
    M sarah/MSSMNoFV/particles.m

  Log Message:
  -----------
  Hack: make SARAH recognize top, bottom and tau


  Commit: 2587ae9be2a1701a411730662d7b52fb50539d46
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2587ae9be2a1701a411730662d7b52fb50539d46
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-01 (Thu, 01 May 2014)

  Changed paths:
    M meta/ThresholdCorrections.m
    M meta/Vertices.m

  Log Message:
  -----------
  handle one-dimensional top, bottom, tau in the Yukawa calculation


  Commit: f1800d4e06d712a3ed9da207fb30d1b407d22bda
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f1800d4e06d712a3ed9da207fb30d1b407d22bda
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-01 (Thu, 01 May 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M meta/ThresholdCorrections.m
    M meta/TreeMasses.m

  Log Message:
  -----------
  fixing some explicite index accesses of 3rd generation fermions


  Commit: 978d4f6261d2451c00ad85d087331551d49b7638
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/978d4f6261d2451c00ad85d087331551d49b7638
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-02 (Fri, 02 May 2014)

  Changed paths:
    M sarah/MSSMNoFV/particles.m

  Log Message:
  -----------
  make Fvt accessible via SARAH`Neutrino


  Commit: 5b7e6fb2717951c1b01dcf35604ba822d2aae25b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5b7e6fb2717951c1b01dcf35604ba822d2aae25b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-02 (Fri, 02 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  adapt DRbar mass calculation functions to one-dimensional case


  Commit: 11e884c9229f607f10b00e770818b4eb277cd3fa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/11e884c9229f607f10b00e770818b4eb277cd3fa
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-02 (Fri, 02 May 2014)

  Changed paths:
    M model_files/MSSMNoFV/FlexibleSUSY.m.in

  Log Message:
  -----------
  Use stop 1 and 2 for the calculation of the SUSY scale


  Commit: 19b210f6e4772d9d127b73e36fc396ffbcd24930
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/19b210f6e4772d9d127b73e36fc396ffbcd24930
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-02 (Fri, 02 May 2014)

  Changed paths:
    M .gitattributes
    A BUGS
    M ChangeLog
    M README
    M config/Makefile.in
    M config/Makefile.standalone.in
    M config/Makefile.tower.in
    M config/config.h.in
    A config/install_stripped.sh
    M config/module.mk
    A config/remove_export_markers.sh
    M configure
    M doc/module.mk
    M doc/paper.tex
    A doc/release
    M examples/module.mk
    M legacy/conversion.cpp
    M legacy/conversion.hpp
    M legacy/diagonalization.cpp
    M legacy/diagonalization.hpp
    M legacy/module.mk
    M meta/CConversion.m
    M meta/Constraint.m
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/SelfEnergies.m
    M meta/TestSuite.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    A model_files/MSSMCPV/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/LesHouches.in.lowMSSM
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyNMSSM/module.mk
    M models/fmssm/module.mk
    M models/fmssmn/module.mk
    M slhaea/module.mk
    M src/build_info.cpp
    M src/command_line_options.cpp
    M src/lattice_solver.cpp
    M src/logger.hpp
    M src/minimizer.hpp
    M src/module.mk
    M src/numerics.cpp
    M src/rge.cpp
    M src/rk.cpp
    M src/root_finder.hpp
    M src/sfermions.cpp
    M src/two_scale_constraint.hpp
    M templates/module.mk.in
    M templates/scan.cpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M test/module.mk
    M test/test_MSSM.hpp
    A test/test_MSSM_info.cpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_susy_scale_constraint.cpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp
    A test/test_Vertices.m
    M test/test_logger.cpp
    M test/test_two_scale_mssm_solver.cpp

  Log Message:
  -----------
  Merge branch 'development' into feature-MSSMNoFV


  Commit: f6e62a8b838462fc201b57cec2f08611f3317116
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f6e62a8b838462fc201b57cec2f08611f3317116
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-03 (Sat, 03 May 2014)

  Changed paths:
    M test/module.mk
    A test/test_MSSMNoFV.hpp
    A test/test_MSSMNoFV_beta_functions.cpp

  Log Message:
  -----------
  adding beta function test MSSM <--> MSSMNoFV


  Commit: cebaa78479c0ba7f01c2a3f94550babf874c5100
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cebaa78479c0ba7f01c2a3f94550babf874c5100
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-03 (Sat, 03 May 2014)

  Changed paths:
    M test/module.mk
    M test/test.h
    A test/test_MSSMNoFV_tree_level_spectrum.cpp

  Log Message:
  -----------
  comparing tree-level spectrum of the MSSMNoFV


  Commit: c0410be317736bd84d2b25d1bf682861a09e2429
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c0410be317736bd84d2b25d1bf682861a09e2429
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-03 (Sat, 03 May 2014)

  Changed paths:
    M test/test_MSSMNoFV_tree_level_spectrum.cpp

  Log Message:
  -----------
  comparing fermions as well


  Commit: 521d0891e7f74d919654c0dff268bb2d3b09eee8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/521d0891e7f74d919654c0dff268bb2d3b09eee8
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-03 (Sat, 03 May 2014)

  Changed paths:
    M src/pv.cpp
    M src/pv.hpp

  Log Message:
  -----------
  src/pv.hpp: add complex -> complex versions of B22, F0, G0, H0


  Commit: aa9abc5392fd7f7b1f49967f247354dc7da1a144
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/aa9abc5392fd7f7b1f49967f247354dc7da1a144
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-03 (Sat, 03 May 2014)

  Changed paths:
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M test/test_MSSM.hpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_spectrum.cpp

  Log Message:
  -----------
  do not hard-code the number of loops in the initial guesser


  Commit: 6d5b18a1cf7b151de87e5de0877997c834259ce7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6d5b18a1cf7b151de87e5de0877997c834259ce7
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-03 (Sat, 03 May 2014)

  Changed paths:
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M test/test_MSSM.hpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_spectrum.cpp

  Log Message:
  -----------
  Merge branch 'development' into feature-MSSMNoFV


  Commit: d83605aa708b2441bea886146548ba5630a0f109
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d83605aa708b2441bea886146548ba5630a0f109
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    M test/test_linalg2.cpp

  Log Message:
  -----------
  test/test_linalg2.cpp: rewrite in terms of test case templates


  Commit: 36a2d0d41233c873e6dad61c517e716636a8029c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/36a2d0d41233c873e6dad61c517e716636a8029c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    A fflite/BcoeffAD.F
    M fflite/fflite.hpp
    M fflite/module.mk
    M src/pv.cpp

  Log Message:
  -----------
  src/pv.cpp: evaluate B functions using Denner's implementation

At version 2.8, LoopTools switched the default B function implementation
from FF to Ansgar Denner's.  This commit follows this change.  One might
ask Thomas Hahn why.


  Commit: b5a1881e70be2b646bb40482a70a4102067fe152
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b5a1881e70be2b646bb40482a70a4102067fe152
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    M config/Makefile.in
    M src/pv.hpp
    M test/module.mk
    A test/test_pv_crosschecks.cpp
    A test/test_pv_crosschecks.sh

  Log Message:
  -----------
  Add loop function cross-checks among fflite, LoopTools, and softsusy

To run this test, do the following:

$ ./configure --enable-looptools --with-looptools-incdir=/path/to/LoopTools/incdir --with-looptools-libdir=/path/to/LoopTools/libdir
$ make
$ make all-test
$ make execute-tests


  Commit: 57dbc9a145a26abba3fb5ace0245f451e4be6b76
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/57dbc9a145a26abba3fb5ace0245f451e4be6b76
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: warn about thread-unsafety of LoopTools


  Commit: 068bd4c389a138e73a33223bddad2709a09192b1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/068bd4c389a138e73a33223bddad2709a09192b1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    M config/Makefile.in
    M config/Makefile.standalone.in
    M config/Makefile.tower.in
    M config/config.h.in
    M configure
    M examples/module.mk
    A fflite/BcoeffAD.F
    A fflite/defs.h
    A fflite/externals.h
    A fflite/ff.h
    A fflite/ffca0.F
    A fflite/ffcb0.F
    A fflite/ffcb1.F
    A fflite/ffcb2p.F
    A fflite/ffcc0.F
    A fflite/ffcli2.F
    A fflite/fferr.h
    A fflite/ffinit.F
    A fflite/fflite.hpp
    A fflite/ffwarn.h
    A fflite/ffxa0.F
    A fflite/ffxb0.F
    A fflite/ffxb1.F
    A fflite/ffxb2p.F
    A fflite/ffxli2.F
    A fflite/ini.F
    A fflite/lt.h
    A fflite/module.mk
    A fflite/types.h
    M src/build_info.cpp
    A src/cextensions.hpp
    M src/module.mk
    A src/pv.cpp
    A src/pv.hpp
    M templates/lattice_model.hpp.in
    M templates/module.mk.in
    M templates/two_scale_model.cpp.in
    M test/module.mk
    A test/test_pv.cpp
    A test/test_pv_crosschecks.cpp
    A test/test_pv_crosschecks.sh

  Log Message:
  -----------
  Merge branch 'feature-fflite' into development


  Commit: b2ef5613d98bfc7c22683613bb95ce2578def292
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b2ef5613d98bfc7c22683613bb95ce2578def292
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: afc8053fcf804daf392de1b90fff436b9c5cae6f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/afc8053fcf804daf392de1b90fff436b9c5cae6f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M test/test_MSSM.hpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_spectrum.cpp

  Log Message:
  -----------
  Merge branch 'development' of github.com:FlexibleSUSY/FlexibleSUSY into development


  Commit: 3d4984589e7b7a60e61793f32c2f09488c21dc9a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3d4984589e7b7a60e61793f32c2f09488c21dc9a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-04 (Sun, 04 May 2014)

  Changed paths:
    M config/Makefile.in
    M fflite/module.mk
    M src/module.mk
    M test/module.mk

  Log Message:
  -----------
  fflite: support make install-src


  Commit: 6b4ab6e6b2553d58ed8bbab486626e4f1f8eaf62
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6b4ab6e6b2553d58ed8bbab486626e4f1f8eaf62
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M models/SoftsusyMSSM/module.mk
    M models/SoftsusyNMSSM/module.mk
    M test/module.mk

  Log Message:
  -----------
  Fix dynamic link errors with fflite or LoopTools enabled


  Commit: ea334098958463c66a5cb6ba62aef346c0b1d6bb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea334098958463c66a5cb6ba62aef346c0b1d6bb
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M test/module.mk

  Log Message:
  -----------
  Fix another dynamic link error with fflite or LoopTools enabled


  Commit: 746a461f20fe462d38f30b84a99a19724ca9d8d9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/746a461f20fe462d38f30b84a99a19724ca9d8d9
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  adding helper function to get LSP


  Commit: 8d10dd66ff7faa7253d187fbeff15ee23b8f7f8a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8d10dd66ff7faa7253d187fbeff15ee23b8f7f8a
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  compare pole masses for the LSP determination


  Commit: 4d1d4c930b1de383c1b257e8c355ef045e71d214
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4d1d4c930b1de383c1b257e8c355ef045e71d214
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  checking LSP routine for the MSSM


  Commit: 116f4dfcf7916e51667cff6acb190dfa1045d9bf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/116f4dfcf7916e51667cff6acb190dfa1045d9bf
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  create get_lsp() function only if PotentialLSPParticles is non-empty


  Commit: e4c0086de2318e96b052ed77e7a5b14315c962fb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e4c0086de2318e96b052ed77e7a5b14315c962fb
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  document `PotentialLSPParticles' variable


  Commit: bf9903ba132caf62da8658fad3b1a6e909034935
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf9903ba132caf62da8658fad3b1a6e909034935
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-05 (Mon, 05 May 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 7faa34f7ac2aaf58b5516e926750a316dbaf9cd5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7faa34f7ac2aaf58b5516e926750a316dbaf9cd5
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M .gitattributes
    A TODO

  Log Message:
  -----------
  adding TODO file with future features


  Commit: 52a9de061233caa02de5fc610fb973fcbff539e7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/52a9de061233caa02de5fc610fb973fcbff539e7
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M test/test_pv_crosschecks.cpp

  Log Message:
  -----------
  test/test_pv_crosschecks.cpp: fix typos


  Commit: 65c12a7317a81d8324533faead016a9df0f92b26
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/65c12a7317a81d8324533faead016a9df0f92b26
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M meta/TreeMasses.m
    M src/coupling_monitor.hpp
    M templates/utilities.cpp.in
    M templates/utilities.hpp.in

  Log Message:
  -----------
  Bugfix: make RGE running monitor and spectrum plotter work again


  Commit: 34d5efee4d1d87f7be60e0d8b0bfaf4608748a3b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/34d5efee4d1d87f7be60e0d8b0bfaf4608748a3b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M README
    M meta/FlexibleSUSY.m
    M src/command_line_options.cpp
    M src/command_line_options.hpp
    M templates/module.mk
    M templates/module.mk.in
    R templates/plot_rge_running.gnuplot.in
    A templates/plot_rgflow.gnuplot.in
    M templates/plot_spectrum.gnuplot.in
    M templates/run.cpp.in

  Log Message:
  -----------
  allow easy plotting of the spectrum and RG flow


  Commit: 0e1b44d0f2b3a5f9e03e65d2b6e7960f47f2a15f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0e1b44d0f2b3a5f9e03e65d2b6e7960f47f2a15f
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M templates/module.mk.in

  Log Message:
  -----------
  distribute gnuplot scripts


  Commit: fa359f6910f97807f904fc536dcdd0f52adf56b8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fa359f6910f97807f904fc536dcdd0f52adf56b8
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M src/pv.cpp

  Log Message:
  -----------
  src/pv.cpp: cosmetic changes


  Commit: 14e2d0cff1f29146e0261cb5fb7a5e13d3d5ea0d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/14e2d0cff1f29146e0261cb5fb7a5e13d3d5ea0d
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  document minimum and maximum scale restrictions


  Commit: a9360ec9795171c3bf76a4e1d8b971927129eb39
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a9360ec9795171c3bf76a4e1d8b971927129eb39
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M src/sfermions.cpp

  Log Message:
  -----------
  correcting error message


  Commit: 0ede80f3ce2c829f3e9095ac02d8889c9c2fa1b8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0ede80f3ce2c829f3e9095ac02d8889c9c2fa1b8
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M templates/two_scale_high_scale_constraint.cpp.in

  Log Message:
  -----------
  provide more information when the calculation of the high-scale fails


  Commit: 27b2294011db379838d5287a3bc4c979999518fb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/27b2294011db379838d5287a3bc4c979999518fb
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-06 (Tue, 06 May 2014)

  Changed paths:
    M test/module.mk
    A test/test_MSSMNoFV_low_scale_constraint.cpp

  Log Message:
  -----------
  testing MSSMNoFV low-scale constraint

This test fails, because

 1. The first and second generation Fermions are not recognized
    as SM particles by SARAH (SMQ[] function returns false).

 2. The prefactors of the logaritms of the sfermions are incorrect


  Commit: 488f102e0bd645d7235c22631bcb8fab6a6bc4a1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/488f102e0bd645d7235c22631bcb8fab6a6bc4a1
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-07 (Wed, 07 May 2014)

  Changed paths:
    M sarah/MSSMNoFV/particles.m

  Log Message:
  -----------
  restore original NoFV model file


  Commit: 88e4adfe0b9f7d00f67587e07ae70b19c55dc651
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/88e4adfe0b9f7d00f67587e07ae70b19c55dc651
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-07 (Wed, 07 May 2014)

  Changed paths:
    M model_files/MSSMNoFV/FlexibleSUSY.m.in

  Log Message:
  -----------
  set SM particles by hand in the FS model file

SARAH currently does not recognize the flavour-decomposed SM fermions
as SM fermions via the SMQ function.


  Commit: f118f98423b1195e4409d61f33c544a0e1bfcccc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f118f98423b1195e4409d61f33c544a0e1bfcccc
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-07 (Wed, 07 May 2014)

  Changed paths:
    M model_files/MSSMNoFV/FlexibleSUSY.m.in

  Log Message:
  -----------
  define casimir operators for SU(3) for 1st and 2nd gen flavour states

SARAH does not define them for the first and second generations.


  Commit: 08b7459b76193406f54a5d1b89186040c473683b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/08b7459b76193406f54a5d1b89186040c473683b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-08 (Thu, 08 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m

  Log Message:
  -----------
  simplify function call


  Commit: 367cb1a9dd2e942f2b10ab4552235f2f65fc8f21
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/367cb1a9dd2e942f2b10ab4552235f2f65fc8f21
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-08 (Thu, 08 May 2014)

  Changed paths:
    M ChangeLog
    M doc/paper.tex
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M test/test_MSSM_model.cpp

  Log Message:
  -----------
  Merge branch 'feature-lsp' into development


  Commit: ff2f2901e331696bd57c8a1a6cc8ddbc02fcf4c6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ff2f2901e331696bd57c8a1a6cc8ddbc02fcf4c6
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-08 (Thu, 08 May 2014)

  Changed paths:
    M doc/chapters/output.tex
    M doc/paper.tex
    M src/betafunction.cpp
    M src/betafunction.hpp
    M src/coupling_monitor.hpp
    M templates/two_scale_soft_parameters.cpp.in
    M templates/two_scale_soft_parameters.hpp.in
    M templates/two_scale_susy_parameters.cpp.in
    M templates/two_scale_susy_parameters.hpp.in
    M templates/utilities.hpp.in
    M test/test_MSSM_info.cpp
    M test/test_betafunction.cpp

  Log Message:
  -----------
  change interface function display() --> get()


  Commit: 21aa3661d0df8425703b83280b77d06ae8124f67
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/21aa3661d0df8425703b83280b77d06ae8124f67
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-09 (Fri, 09 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  updating speed test results (including non-fv FS variant)


  Commit: 882b843a3542bdf2e230515407a0c249ef53e2bf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/882b843a3542bdf2e230515407a0c249ef53e2bf
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-09 (Fri, 09 May 2014)

  Changed paths:
    M meta/LoopMasses.m
    M meta/SelfEnergies.m
    M meta/ThresholdCorrections.m
    M meta/TreeMasses.m
    M meta/Vertices.m
    A model_files/MSSMNoFV/FlexibleSUSY.m.in
    A sarah/MSSMNoFV/MSSMNoFV.m
    A sarah/MSSMNoFV/parameters.m
    A sarah/MSSMNoFV/particles.m
    M test/module.mk
    M test/test.h
    A test/test_MSSMNoFV.hpp
    A test/test_MSSMNoFV_beta_functions.cpp
    A test/test_MSSMNoFV_low_scale_constraint.cpp
    A test/test_MSSMNoFV_tree_level_spectrum.cpp

  Log Message:
  -----------
  Merge branch 'feature-MSSMNoFV' into development

This adds the non-flavour violating model file to FS.  Note, that the
current SARAH version has a bug, which leads to zero mass matrices for
the first two generation sfermions.  This can be fixed by hand by
replacing in (mixings.m, line 758) the line

  If[FreeQ[OffSetFlavors, basis[[i, 1, 1]]],

by

  If[FreeQ[OffSetFlavorsXXX, basis[[i,1,1]]],


  Commit: f96ef8e08eed3bc3849b5d238138119df193ac10
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f96ef8e08eed3bc3849b5d238138119df193ac10
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-09 (Fri, 09 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  update version number of FS


  Commit: 57b561a57cb042bd00f581940423e9e4812e08c1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/57b561a57cb042bd00f581940423e9e4812e08c1
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-09 (Fri, 09 May 2014)

  Changed paths:
    M model_files/MRSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  Bugfix: correcting LSP particle names in the MRSSM


  Commit: a58ca834922c1882860a1ba93dc6b5192885e7c5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a58ca834922c1882860a1ba93dc6b5192885e7c5
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  fix warning

The warning about non-set HighScale* variables should only be printed
if no low-scale model is chosen.


  Commit: e980fe27f61dc4655191f5a24f9d0eb9f16b167d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e980fe27f61dc4655191f5a24f9d0eb9f16b167d
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  default initialization of model file variables


  Commit: bc365c9294c086645ee999eb16f195ad763aa434
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bc365c9294c086645ee999eb16f195ad763aa434
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  update year


  Commit: f43b1f92ea346fb9fb727613d9480b5941a2ce1b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f43b1f92ea346fb9fb727613d9480b5941a2ce1b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove duplicate reference


  Commit: 208df8f8a95b73c5ee60307fe9fd955546454fe5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/208df8f8a95b73c5ee60307fe9fd955546454fe5
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  improve description of model class hierarchy and boundary conditions


  Commit: 89115b3b74eb627682b6d0e4efed33bdc222f7a8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/89115b3b74eb627682b6d0e4efed33bdc222f7a8
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  my eyes suffer less with 11pt and CM font


  Commit: 934b8826eb9be252c03743f05fd738ed0210a148
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/934b8826eb9be252c03743f05fd738ed0210a148
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  try to make Section 6.2.1 a bit clearer


  Commit: 3a1df5b147564ed19266692ed473b69d1fc09068
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3a1df5b147564ed19266692ed473b69d1fc09068
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  improve rest of Section 6 a bit


  Commit: 95ba7ae3b4937a5359e18acc689ca298d8e649c6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/95ba7ae3b4937a5359e18acc689ca298d8e649c6
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-10 (Sat, 10 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  moving the SLHA input file to the appendix


  Commit: 55ed44ee5b8d8c9e7625514a4bbf971de52904ea
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/55ed44ee5b8d8c9e7625514a4bbf971de52904ea
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-11 (Sun, 11 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  better spacing of listings


  Commit: 9fd9e07c6a28deea4872955563b406d2561043e2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9fd9e07c6a28deea4872955563b406d2561043e2
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-11 (Sun, 11 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  avoid nullptr to enable compilation with g++ 4.4.7

For some reason

   if (thread_exception)
      std::rethrow_exception(thread_exception);

does not work (but it should)!


  Commit: 744eac3ab3c40920b96f7c9e8d5278ce63e7bb20
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/744eac3ab3c40920b96f7c9e8d5278ce63e7bb20
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-11 (Sun, 11 May 2014)

  Changed paths:
    M meta/LoopMasses.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  factor out thread exception pointer handling

This avoids a dependency of the meta code on the two-scale model
class internals.


  Commit: ca7bbec43b1ed006b3a82e994ada660d38e0a88e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ca7bbec43b1ed006b3a82e994ada660d38e0a88e
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-11 (Sun, 11 May 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  check for availability of std::thread and std::mutex .

If not available, we exit with error code 1 and recommend to
reconfigure with --disable-threads or use a C++ compiler which
supports it and we exit.

An alternative might be to implicitely disable threads by setting

  enable_threads="no"

But I think implicite changing the user's settings is dangerous.


  Commit: 560a2b068fa4ef6c5931afdf6e582e71a9d74e6a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/560a2b068fa4ef6c5931afdf6e582e71a9d74e6a
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-11 (Sun, 11 May 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  include <mutex> header for more recent g++ versions


  Commit: 7f52e8cc60192a1d1255dfff5934f435c38e79cd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7f52e8cc60192a1d1255dfff5934f435c38e79cd
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-12 (Mon, 12 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  improve the design goal and compilation sections a bit


  Commit: 4dbec42e2fc161532abf4e6944bab4e2e98b0b0e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4dbec42e2fc161532abf4e6944bab4e2e98b0b0e
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-13 (Tue, 13 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  improve section 8


  Commit: e93eb03c1d17d65eb55f7e88862f559a3e1e8e51
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e93eb03c1d17d65eb55f7e88862f559a3e1e8e51
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-13 (Tue, 13 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  extending Appendix B


  Commit: 172bdc5925e51579ad4cc1b28d02516b40972ed0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/172bdc5925e51579ad4cc1b28d02516b40972ed0
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-13 (Tue, 13 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  adding References title


  Commit: 49fe996b606eb45650987db70b0e48c756fa6763
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/49fe996b606eb45650987db70b0e48c756fa6763
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-13 (Tue, 13 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  put SLHA template file into lstlisting environmetn


  Commit: 5fdf86be4115519ff4ebef1428d9d7a016d5fd86
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5fdf86be4115519ff4ebef1428d9d7a016d5fd86
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-13 (Tue, 13 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  give more details on the fixed-point iteration


  Commit: d7e76d55e6a583864512dc08da597778b8110f14
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d7e76d55e6a583864512dc08da597778b8110f14
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-14 (Wed, 14 May 2014)

  Changed paths:
    M templates/two_scale_low_scale_constraint.cpp.in

  Log Message:
  -----------
  reset MZDRbar in the low-scale constraint


  Commit: 0ab4066c5b25b18b347fee654a6d0d4fe327443b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0ab4066c5b25b18b347fee654a6d0d4fe327443b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-14 (Wed, 14 May 2014)

  Changed paths:
    M src/betafunction.cpp
    M src/betafunction.hpp

  Log Message:
  -----------
  adding reset() function for the beta-function base class


  Commit: 33c16d26172b77385cb4e2a8dda916f39a493b95
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/33c16d26172b77385cb4e2a8dda916f39a493b95
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-14 (Wed, 14 May 2014)

  Changed paths:
    M templates/two_scale_susy_parameters.cpp.in

  Log Message:
  -----------
  reset beta-function base class state


  Commit: 98f6e3c9c0fa35312dd57e35e3cb2032533bc76b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/98f6e3c9c0fa35312dd57e35e3cb2032533bc76b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-14 (Wed, 14 May 2014)

  Changed paths:
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser.hpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.hpp.in

  Log Message:
  -----------
  use a fixed default running precision in the initial guesser


  Commit: c9cc34f5779e3434f3faab56e62616e8b3cc8f60
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c9cc34f5779e3434f3faab56e62616e8b3cc8f60
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-14 (Wed, 14 May 2014)

  Changed paths:
    M ChangeLog
    M meta/FlexibleSUSY.m
    M meta/Parameters.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  Bugfix: reset fermion phases in the clear() function


  Commit: 5260f8200ed7f885782df5ab86929041dc44d471
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5260f8200ed7f885782df5ab86929041dc44d471
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-05-16 (Fri, 16 May 2014)

  Changed paths:
    M legacy/conversion.cpp
    M legacy/conversion.hpp
    M legacy/diagonalization.cpp
    M legacy/diagonalization.hpp
    M src/linalg.cpp
    M src/linalg.h
    M src/slha_io.cpp
    M src/slha_io.hpp

  Log Message:
  -----------
  Put softsusy namespace around classes in linalg and added relevant
identifier where it seemed necessary.


  Commit: 0561210316b3f1d3c153f954cf904e04c2631cc6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0561210316b3f1d3c153f954cf904e04c2631cc6
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-15 (Thu, 15 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  give example output for the default CMSSM parameter point


  Commit: fd171f5e13f27596bcb100f6127898f63fee9517
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fd171f5e13f27596bcb100f6127898f63fee9517
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-15 (Thu, 15 May 2014)

  Changed paths:
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/LesHouches.in.NMSSM
    M src/spectrum_generator_settings.cpp
    M src/spectrum_generator_settings.hpp
    M templates/run.cpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in

  Log Message:
  -----------
  allow setting of beta-function loop order in SLHA input file


  Commit: ec85f971edea851004afd9d0d40f1b1f7329c9d0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ec85f971edea851004afd9d0d40f1b1f7329c9d0
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-15 (Thu, 15 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  updating SLHA input file for the speed-test


  Commit: faa0fb6ae30f596d837bf9202ad979d8e3ddd808
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/faa0fb6ae30f596d837bf9202ad979d8e3ddd808
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-16 (Fri, 16 May 2014)

  Changed paths:
    M src/module.mk

  Log Message:
  -----------
  Bugfix: add boost include directory to CPPFLAGS in the src module


  Commit: 041eb3c4b50b5950ac2cb91fa1eddd3a0d78c70e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/041eb3c4b50b5950ac2cb91fa1eddd3a0d78c70e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-16 (Fri, 16 May 2014)

  Changed paths:
    M model_files/MRSSM/LesHouches.in.MRSSM
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/LesHouches.in.NMSSM
    M src/spectrum_generator_settings.cpp
    M src/spectrum_generator_settings.hpp
    M templates/run.cpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in

  Log Message:
  -----------
  allow to disable/enable threshold corrections


  Commit: f257a6cbf0f0a9ce7b5e1e0d0ea97b8a26a674d2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f257a6cbf0f0a9ce7b5e1e0d0ea97b8a26a674d2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-16 (Fri, 16 May 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/spectrum_generator.hpp.in

  Log Message:
  -----------
  port setting of beta loop order and thresholds to low-scale SG


  Commit: ff2dcb9c1c4a0bffc597240f65df56ba8ceccbda
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ff2dcb9c1c4a0bffc597240f65df56ba8ceccbda
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-16 (Fri, 16 May 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: b9e9578d2934197f4934c0c776c2da488c4dfbf6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b9e9578d2934197f4934c0c776c2da488c4dfbf6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-16 (Fri, 16 May 2014)

  Changed paths:
    M ChangeLog
    M src/module.mk

  Log Message:
  -----------
  Merge branch 'bugfix-boost-inc' into development


  Commit: 0918a42aef3d0aab664b10547601b9ca38fbec64
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0918a42aef3d0aab664b10547601b9ca38fbec64
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-16 (Fri, 16 May 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 9f73bc0a6034ff3e67fe35a66c0aa5ce8a50d1cb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9f73bc0a6034ff3e67fe35a66c0aa5ce8a50d1cb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-17 (Sat, 17 May 2014)

  Changed paths:
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    M test/test_NMSSM_spectrum.cpp

  Log Message:
  -----------
  fixing MSSM and NMSSM tests


  Commit: ac8e38e91d44a3f31b1daad3a89bdd9cb3e21ca1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ac8e38e91d44a3f31b1daad3a89bdd9cb3e21ca1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-18 (Sun, 18 May 2014)

  Changed paths:
    M templates/spectrum_generator.hpp.in

  Log Message:
  -----------
  Bugfix: impose EWSB before calculating the spectrum

The last steps in the spectrum generator are to run to the susy scale
and calculate the pole mass spectrum.  However, the running to the
susy scale might spoil the EWSB.  Therefore, solve_ewsb() has to be
called directly after the run to the susy scale and before we
calculate the spectrum.


  Commit: 3a761a695d99c7bc62061b7c2d1aaa566e7015c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3a761a695d99c7bc62061b7c2d1aaa566e7015c8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-18 (Sun, 18 May 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 07b0d5c62a43a1e823203e87d01d23ee3b4dce15
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/07b0d5c62a43a1e823203e87d01d23ee3b4dce15
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-18 (Sun, 18 May 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in

  Log Message:
  -----------
  apply bugfix ac8e38e to low-energy models as well


  Commit: 9f7d4caf9a9dafb9c2b735ace363bd679ae2bb50
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9f7d4caf9a9dafb9c2b735ace363bd679ae2bb50
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-05-21 (Wed, 21 May 2014)

  Changed paths:
    M src/coupling_monitor.hpp

  Log Message:
  -----------
  rename interface function reset() --> clear()

Reason: it sets all internally stored couplings to zero, which is
really "clearing" the state.  "Resetting" means something more
general, namely setting the state back to the default.


  Commit: 709667585964bb44f38da16bd38d98e7ee9ac6b6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/709667585964bb44f38da16bd38d98e7ee9ac6b6
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-21 (Wed, 21 May 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  src/slha_io.cpp: trim some blanks


  Commit: fb6f8db4362b44de8eab782b79be97e20793dc2b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fb6f8db4362b44de8eab782b79be97e20793dc2b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-21 (Wed, 21 May 2014)

  Changed paths:
    M model_files/MSSMRHN/FlexibleSUSY.m.in

  Log Message:
  -----------
  Delete an obsolete comment


  Commit: 997685389016fce85c5aef5cac9ca3a2ed67ccd5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/997685389016fce85c5aef5cac9ca3a2ed67ccd5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-21 (Wed, 21 May 2014)

  Changed paths:
    A model_files/NUHMSSM/FlexibleSUSY.m.in
    A model_files/NUHMSSM/LesHouches.in.NUHMSSM

  Log Message:
  -----------
  Add NUHMSSM


  Commit: 82dda3628ce20bf32715a9e0cce532ed43e5fddc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/82dda3628ce20bf32715a9e0cce532ed43e5fddc
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-21 (Wed, 21 May 2014)

  Changed paths:
    M config/Makefile.tower.in

  Log Message:
  -----------
  config/Makefile.tower.in: add missing ENABLE_FFLITE


  Commit: 111eb0328ecea2e8efa384b1f317369862fb82e3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/111eb0328ecea2e8efa384b1f317369862fb82e3
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-22 (Thu, 22 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add Eigen to list of external routines


  Commit: 4700463fc0cb1839c3ebd50e8dbefa80f7be7732
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4700463fc0cb1839c3ebd50e8dbefa80f7be7732
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-23 (Fri, 23 May 2014)

  Changed paths:
    M model_files/MSSMRHN/FlexibleSUSY.m.in

  Log Message:
  -----------
  model_files/MSSMRHN/FlexibleSUSY.m.in: follow commit be6dfb45


  Commit: 25fee8ae8256bd38b87f677d7681c242858e0198
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/25fee8ae8256bd38b87f677d7681c242858e0198
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-24 (Sat, 24 May 2014)

  Changed paths:
    M createmodel

  Log Message:
  -----------
  additional debug output from ./createmodel

It serves as a check which SARAH model file is used, and which
FlexibleSUSY model file is used.


  Commit: f30fb0f73cd6b5d6c09b7b1bd1461e791f9a214e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f30fb0f73cd6b5d6c09b7b1bd1461e791f9a214e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-24 (Sat, 24 May 2014)

  Changed paths:
    M TODO

  Log Message:
  -----------
  update TODO list


  Commit: 33c122a69c467fd20ad9940eed25bccee5c73130
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/33c122a69c467fd20ad9940eed25bccee5c73130
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-24 (Sat, 24 May 2014)

  Changed paths:
    M .gitattributes

  Log Message:
  -----------
  do not export models which don't work or are only for testing


  Commit: f9db94853d1c3968c790240b652808b0a732bf65
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f9db94853d1c3968c790240b652808b0a732bf65
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-24 (Sat, 24 May 2014)

  Changed paths:
    M legacy/rk_legacy.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_parameter_point.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/mssmUtils.h
    M models/SoftsusyMSSM/physpars.cpp
    M models/SoftsusyMSSM/physpars.h
    M models/SoftsusyMSSM/run_SoftsusyMSSM.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_parameter_point.hpp
    M models/smcw/smcw_two_scale.cpp
    M models/smcw/smcw_two_scale.hpp
    M src/linalg.cpp
    M src/numerics.cpp
    M src/numerics.h
    M src/slha_io.hpp
    M test/test.h
    M test/test_rk.cpp
    M test/test_two_scale_solver.cpp
    M test/test_wrappers.cpp

  Log Message:
  -----------
  fixing more softsusy namespace issues


  Commit: 77c57bd1172ed699b747480b7a4e8b309ddc3739
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/77c57bd1172ed699b747480b7a4e8b309ddc3739
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-24 (Sat, 24 May 2014)

  Changed paths:
    M .gitattributes

  Log Message:
  -----------
  do not distribute the sm and smcw models

These models are only used for testing the effective field theory
towers.


  Commit: 50786010122847ee4fcebcc720f0efc87062a549
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/50786010122847ee4fcebcc720f0efc87062a549
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-24 (Sat, 24 May 2014)

  Changed paths:
    M legacy/conversion.cpp
    M legacy/conversion.hpp
    M legacy/diagonalization.cpp
    M legacy/diagonalization.hpp
    M legacy/rk_legacy.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_parameter_point.hpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/mssmUtils.h
    M models/SoftsusyMSSM/physpars.cpp
    M models/SoftsusyMSSM/physpars.h
    M models/SoftsusyMSSM/run_SoftsusyMSSM.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_parameter_point.hpp
    M models/smcw/smcw_two_scale.cpp
    M models/smcw/smcw_two_scale.hpp
    M src/linalg.cpp
    M src/linalg.h
    M src/numerics.cpp
    M src/numerics.h
    M src/slha_io.cpp
    M src/slha_io.hpp
    M test/test.h
    M test/test_rk.cpp
    M test/test_two_scale_solver.cpp
    M test/test_wrappers.cpp

  Log Message:
  -----------
  Merge branch 'more-namespace' into development


  Commit: 3ce384bd931a1936d6a20e258383e47414b12d18
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3ce384bd931a1936d6a20e258383e47414b12d18
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-25 (Sun, 25 May 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/spectrum_generator.hpp.in

  Log Message:
  -----------
  use initialization lists for the vector of constraints

This is faster and a bit more readable.  I checkt that it compiles
with g++ 4.4.7.


  Commit: ea67957c77ac962a8975912e991ff7c684ca3bce
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea67957c77ac962a8975912e991ff7c684ca3bce
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-25 (Sun, 25 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  make get_lsp() function const


  Commit: 8f48f1be835855816a335788b5d2c09ad952d6ed
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8f48f1be835855816a335788b5d2c09ad952d6ed
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-25 (Sun, 25 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  flag tachyon when calculating DR-bar masses from pole massses


  Commit: 9e459f3fe0dcb6e0a453e894c046b25deb5a60c6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9e459f3fe0dcb6e0a453e894c046b25deb5a60c6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-25 (Sun, 25 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  remove trailing newline


  Commit: 1f706ff531df962a44feae99491034fca48ffbad
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1f706ff531df962a44feae99491034fca48ffbad
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-25 (Sun, 25 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  use AbsSqrt instead of ZeroSqrt to avoid division by zero


  Commit: 632dd624f48ab3aef5a067959afbe9e7d79e5183
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/632dd624f48ab3aef5a067959afbe9e7d79e5183
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-25 (Sun, 25 May 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  return pole mass instead of sqrt of the magnitude in case of tachyon

Here we assume that the pole mass is closer to the DR-bar mass than
the sqrt of the magnitude of the negative mass eigenvalue.


  Commit: 6881c80da51e3f24674a38856c377e12b8e7b40f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6881c80da51e3f24674a38856c377e12b8e7b40f
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  very minor change to english and added comment about B\mu = 0 claim.
Wanted to make change when spotted or I'd forget. hope doesn't cause merge
problems with Dominik.


  Commit: 7fe012b1628b19635e5c76a267a962ece3d2e3cc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7fe012b1628b19635e5c76a267a962ece3d2e3cc
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M .gitattributes
    M meta/module.mk
    M src/module.mk
    M templates/module.mk
    M templates/module.mk.in

  Log Message:
  -----------
  Suppress lattice code from releases


  Commit: f83382d79da028bacc4b589c81cfdf1718e427b3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f83382d79da028bacc4b589c81cfdf1718e427b3
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  Print full name of an author


  Commit: 4f022b63e81bbae8887d10016d9d06666fb3a8c9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4f022b63e81bbae8887d10016d9d06666fb3a8c9
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M src/two_scale_composite_convergence_tester.cpp
    M src/two_scale_composite_convergence_tester.hpp

  Log Message:
  -----------
  Add default implementation of Composite_convergence_tester::max_iterations()


  Commit: 3f60789aabd120061a6a24ca0516cb64dbc8c46e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3f60789aabd120061a6a24ca0516cb64dbc8c46e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp

  Log Message:
  -----------
  Use composite convergence tester in tower example


  Commit: 5f2f9fee4fd9897831bee7dcc2f4919589fec51f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5f2f9fee4fd9897831bee7dcc2f4919589fec51f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/module.mk

  Log Message:
  -----------
  examples/module.mk: eliminate lattice code


  Commit: 9951494290a1530c5e18b53690683fa40104d97d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9951494290a1530c5e18b53690683fa40104d97d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/module.mk

  Log Message:
  -----------
  examples/module.mk: add tower to STANDALONE_DIR

so that make distclean cleans the tower directory as well.


  Commit: 28cf6284edbf86a2aa26b64a614d8c862e1afd6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/28cf6284edbf86a2aa26b64a614d8c862e1afd6e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    A src/composite_convergence_tester.hpp
    M src/two_scale_composite_convergence_tester.cpp
    M src/two_scale_composite_convergence_tester.hpp

  Log Message:
  -----------
  Promote Composite_convergence_tester to a template


  Commit: 535746d7b82f4318839dedaf8c6ae06d8b1c10cc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/535746d7b82f4318839dedaf8c6ae06d8b1c10cc
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M src/module.mk

  Log Message:
  -----------
  src/module.mk: export composite_convergence_tester.hpp


  Commit: 7f9bd480f5a8e0b5018cd1b16532e9b40ab144b4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7f9bd480f5a8e0b5018cd1b16532e9b40ab144b4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  remove support for a default parameter point


  Commit: f3d80fb1f8b26f59b82aad60c01d0ea6c0cc9ee7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f3d80fb1f8b26f59b82aad60c01d0ea6c0cc9ee7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M doc/chapters/usage.tex
    M doc/paper.tex

  Log Message:
  -----------
  remove documentation of default parameter point


  Commit: e13a8b2409f16979f338f6f174a9cbc6f2fe3d38
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e13a8b2409f16979f338f6f174a9cbc6f2fe3d38
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMCPV/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  remove default parameter points from model files


  Commit: 3032ae5903dc9e1ce06e3b87068fd5d73efd17df
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3032ae5903dc9e1ce06e3b87068fd5d73efd17df
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    A model_files/UMSSM/LesHouches.in.UMSSM

  Log Message:
  -----------
  adding default SLHA input file for the UMSSM


  Commit: bbc987f15150c6e0b444af81df823b055c6edc7f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bbc987f15150c6e0b444af81df823b055c6edc7f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M templates/run.cpp.in

  Log Message:
  -----------
  exit with an error message if no SLHA input file is given


  Commit: 0e689a395f27e5e7612e110fa08184d437eea30a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0e689a395f27e5e7612e110fa08184d437eea30a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M test/test_MSSM.hpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  more initialization


  Commit: 828d12eb62e41a780180150f74b98753786e89bf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/828d12eb62e41a780180150f74b98753786e89bf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M test/test_MSSM.hpp
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_slha_output.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_MSSM_susy_scale_constraint.cpp

  Log Message:
  -----------
  initialize all input parameters


  Commit: 46ba0b6dfaf2859808d7108ea9a571261755c59b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/46ba0b6dfaf2859808d7108ea9a571261755c59b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M test/test_SMSSM.hpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  fix SMSSM tests


  Commit: 193707737449ec7af42121e212eb5b441dd24126
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/193707737449ec7af42121e212eb5b441dd24126
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.hpp.in

  Log Message:
  -----------
  split initialization of constraint state


  Commit: d9fb42756f78b24da58380cb82900dc2fb9d4e36
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d9fb42756f78b24da58380cb82900dc2fb9d4e36
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_self_energies.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_tree_level_spectrum.cpp

  Log Message:
  -----------
  fix NMSSM tests


  Commit: 8a2b1f59786772e223f9749273eba9d7d054de4e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8a2b1f59786772e223f9749273eba9d7d054de4e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_susy_parameters.cpp.in
    M templates/two_scale_susy_parameters.hpp.in
    M test/test_MSSM.hpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_spectrum.cpp

  Log Message:
  -----------
  consistent naming of input parameter setters


  Commit: 95055b2111a2de5573ba7eb92bd0fb8c78eaed50
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/95055b2111a2de5573ba7eb92bd0fb8c78eaed50
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  the SG cannot be run without a SLHA input file


  Commit: 061487f44fb9c432051a850a9bd8fe300d8721da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/061487f44fb9c432051a850a9bd8fe300d8721da
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/chapters/usage.tex
    M doc/paper.tex
    M meta/FlexibleSUSY.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMCPV/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    A model_files/UMSSM/LesHouches.in.UMSSM
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/run.cpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_susy_parameters.cpp.in
    M templates/two_scale_susy_parameters.hpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.hpp.in
    M test/test_MSSM.hpp
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_slha_output.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_self_energies.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_tree_level_spectrum.cpp
    M test/test_SMSSM.hpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  Merge branch 'feature-no-default-pp' into development


  Commit: 8cff0edb6272327a68dc8db1019609c2f9b8c63d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8cff0edb6272327a68dc8db1019609c2f9b8c63d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp

  Log Message:
  -----------
  adapt tower example spectrum generator to recent interface change


  Commit: f034942259b232c1ef07e70beb0d0bb9d818de92
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f034942259b232c1ef07e70beb0d0bb9d818de92
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M src/two_scale_convergence_tester_skeleton.hpp

  Log Message:
  -----------
  Test convergence of scale in Convergence_tester_skeleton

Since it checks convergence of DRbar parameters.


  Commit: 389e977547912355eefb7f5c7365593aced2b3e5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/389e977547912355eefb7f5c7365593aced2b3e5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M src/module.mk
    A src/two_scale_convergence_tester_drbar.hpp
    R src/two_scale_convergence_tester_skeleton.hpp
    M templates/two_scale_convergence_tester.cpp.in
    M templates/two_scale_convergence_tester.hpp.in

  Log Message:
  -----------
  Rename Convergence_tester_skeleton to Convergence_tester_DRbar

Convergence_tester_DRbar is supposed to be a base class of convergence
testers that examine scale-dependent quantities such as DRbar masses.


  Commit: 35c5c9bb6d7dceac678a4be06ce3ec130e8c13e1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/35c5c9bb6d7dceac678a4be06ce3ec130e8c13e1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    A src/convergence_tester_drbar.hpp
    M src/module.mk
    M src/two_scale_convergence_tester_drbar.hpp

  Log Message:
  -----------
  Make Convergence_tester_DRbar available to other methods

The Convergence_tester_DRbar class template in
src/two_scale_convergence_tester_drbar.hpp is now a partial
specialization of that in src/convergence_tester_drbar.hpp.


  Commit: bf35aed924c11a42a2dc59a43ace711a24120f45
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf35aed924c11a42a2dc59a43ace711a24120f45
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    A src/convergence_tester_drbar.hpp
    M src/module.mk
    A src/two_scale_convergence_tester_drbar.hpp
    R src/two_scale_convergence_tester_skeleton.hpp
    M templates/two_scale_convergence_tester.cpp.in
    M templates/two_scale_convergence_tester.hpp.in

  Log Message:
  -----------
  Merge branch 'convergence-tester-drbar' into development


  Commit: f952f821da27413120612351abdfea599749fddc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f952f821da27413120612351abdfea599749fddc
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M templates/slha_io.cpp.in

  Log Message:
  -----------
  Output full name of an author


  Commit: 1c73c62a534ee38a6cadf15d21f34180b893938b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1c73c62a534ee38a6cadf15d21f34180b893938b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove example models E6SSM and NMSSM from the appendix


  Commit: 01fbd60566ca315ba71c869f456ed8fbdd2034f2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/01fbd60566ca315ba71c869f456ed8fbdd2034f2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  typo


  Commit: da8b589cf7e28fa41f345e3807475392064b84e4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/da8b589cf7e28fa41f345e3807475392064b84e4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting description of SM fermion mass calculation.

Note: mt is calculated from mt^pole.  The top self-energies miss the
pure QCD corrections, which are added separately.  mb and mtau are
calculated from MS-bar/DR-bar masses, which already contain photon and
QCD contributions.  Therefore in Sigma_{b,tau} these contributions
must be omitted.


  Commit: 20e465e4b583e5d33ef12eac1a582d88a9b622fb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/20e465e4b583e5d33ef12eac1a582d88a9b622fb
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M src/two_scale_convergence_tester_drbar.hpp

  Log Message:
  -----------
  two_scale_convergence_tester_drbar.hpp: do not include wrappers.hpp

wrappers.hpp would include Eigen even though some models do not need
it.


  Commit: 79fef953f4820c5bc537727359822400f8c3fc5f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/79fef953f4820c5bc537727359822400f8c3fc5f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.hpp
    M models/smcw/smcw_two_scale_convergence_tester.cpp
    M models/smcw/smcw_two_scale_convergence_tester.hpp

  Log Message:
  -----------
  Eliminate remaining Convergence_tester_skeleton dependency

By replacing it with Convergence_tester_DRbar.


  Commit: ba8af541561fafd0543963d40ac0764fe693ec2c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ba8af541561fafd0543963d40ac0764fe693ec2c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: replace --models= by --name= in createmodel command


  Commit: fb3f57835398c0b8f32a1be278f4da147486bdad
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fb3f57835398c0b8f32a1be278f4da147486bdad
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: shorten an execution command


  Commit: 44509be3c42987c03068bab21777aa6567b459ab
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/44509be3c42987c03068bab21777aa6567b459ab
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M sarah/E6SSM/E6SSM.m

  Log Message:
  -----------
  Bugfix: mix inert singlets for SARAH 4.2

SARAH 4.2 does not calculate the mixing matrix for the fermionic inert
singlet fields if their mixing is not defined.  This commit mixes the
singlets.


  Commit: 035ffc7d4ba1f86eaafd82ff4fa6183581c072e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/035ffc7d4ba1f86eaafd82ff4fa6183581c072e6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  fix warning

Since SARAH 4.2 the list SARAH`Masses[EWSB] contains elements of the
form `0 -> MassGiven[VG]' for vector bosons, for examples

  {0 -> MassGiven[VG],
   Mass[gG] -> MassGiven[gG],
   Mass[Glu] -> MassRead[Glu],
   Mass[Fv[1]] -> MassGiven[Fv[1]],
   ... }

For these elements GetHead[#[[1,1]]] produces an error, since `0' is
not a list.  This commit fixes the bug by filtering only elements out
which are of the form

   SARAH`Mass[p_] -> _


  Commit: f4db17a60287749d9483d97dd4640750ea955210
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f4db17a60287749d9483d97dd4640750ea955210
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-31 (Sat, 31 May 2014)

  Changed paths:
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM

  Log Message:
  -----------
  LesHouches.in.NUHMSSM: fix cases in comments


  Commit: ddb9c0175916b09a3171f69848fff19bb73bc09b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ddb9c0175916b09a3171f69848fff19bb73bc09b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-31 (Sat, 31 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: update address


  Commit: 3218c0ff7b91e566f91a0452df6ff7502bc98425
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3218c0ff7b91e566f91a0452df6ff7502bc98425
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-31 (Sat, 31 May 2014)

  Changed paths:
    M model_files/MRSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  Workaround for the Weinberg angle in the MRSSM in SARAH 4.2.2

SARAH 4.2.2 defines Weinberg angle as

  {ThetaW, { Description -> "Weinberg-Angle",
       DependenceNum -> None,
       Value -> 0.511621}},

However, we currently need its analytic expression in terms of MW and
MZ.  This workaround puts the analytic expression back into
SARAH`ParameterDefinitions.


  Commit: 5bd7c1511783bb0898eaa83901af243dde5299ee
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5bd7c1511783bb0898eaa83901af243dde5299ee
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-01 (Sun, 01 Jun 2014)

  Changed paths:
    M templates/plot_spectrum.gnuplot.in

  Log Message:
  -----------
  plot lines instead of boxes


  Commit: a4325e161768f7e9980a3f8afb3a1bf35977ec5f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a4325e161768f7e9980a3f8afb3a1bf35977ec5f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-01 (Sun, 01 Jun 2014)

  Changed paths:
    M test/module.mk
    M test/test_root_finder.cpp

  Log Message:
  -----------
  test all root solvers and monitor the function calls


  Commit: e69eaac8e0608e015f1c20fa05a883cb4de875a8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e69eaac8e0608e015f1c20fa05a883cb4de875a8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-01 (Sun, 01 Jun 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  add newton to list of root finders

I found that when scanning over tan(beta) in the MSSM some points are
invalid due to "no ewsb" errors.  It seems that both
gsl_multiroot_fsolver_hybrid and gsl_multiroot_fsolver_hybrids can
sometimes not find a solution with the required precision.  But when I
add Newton's method some more points work!

Example point which fails with gsl_multiroot_fsolver_hybrid and
gsl_multiroot_fsolver_hybrids, but works with
gsl_multiroot_fsolver_dnewton :

Block MODSEL                 # Select model
    1    1                   # mSUGRA
    3    0                   # MSSM
Block FlexibleSUSY
    0   1.000000000e-04      # precision goal
    1   0                    # max. iterations (0 = automatic)
    2   0                    # algorithm (0 = two_scale, 1 = lattice)
    3   0                    # calculate SM pole masses
    4   2                    # pole mass loop order
    5   2                    # EWSB loop order
    6   2                    # beta-functions loop order
    7   1                    # threshold corrections (0 = disabled, 1 = enabled)
Block SMINPUTS               # Standard Model inputs
    1   1.279340000e+02      # alpha^(-1) SM MSbar(MZ)
    2   1.166370000e-05      # G_Fermi
    3   1.176000000e-01      # alpha_s(MZ) SM MSbar
    4   9.118760000e+01      # MZ(pole)
    5   4.200000000e+00      # mb(mb) SM MSbar
    6   1.733000000e+02      # mtop(pole)
    7   1.777000000e+00      # mtau(pole)
    8   0.000000000e+00      # mnu3(pole)
   11   5.109989020e-04      # melectron(pole)
   12   0.000000000e+00      # mnu1(pole)
   13   1.056583570e-01      # mmuon(pole)
   14   0.000000000e+00      # mnu2(pole)
   21   4.750000000e-03      # md(2 GeV)
   22   2.400000000e-03      # mu(2 GeV)
   23   1.040000000e-01      # ms(2 GeV)
   24   1.270000000e+00      # mc(2 GeV)
Block MINPAR                 # Input parameters
    1   5000.                # m0
    2   5000.                # m12
    3   22.45                # TanBeta
    4   1                    # SignMu
    5   5000.                # Azero
Block EXTPAR
    0   0                    # unification scale (0 = automatic)


  Commit: ab0ef8da89a15aba0a201f2cb20b0bbc42af6f88
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ab0ef8da89a15aba0a201f2cb20b0bbc42af6f88
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  meta/FlexibleSUSY.m: do not process lattice C++ source files


  Commit: 37234f400472c91b5acfb1876f42fd5ae9cc8919
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37234f400472c91b5acfb1876f42fd5ae9cc8919
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp

  Log Message:
  -----------
  Adapt tower example to commit 096fb02e2d0637a87ad22a7b776a5a71dfb980a8


  Commit: 628507917be158e4e938f9301075a78a21c3e1c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/628507917be158e4e938f9301075a78a21c3e1c8
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.hpp

  Log Message:
  -----------
  Add model suffixes to more variable names in tower example

For the sake of coherence.


  Commit: 394a9645d7c9dac1938f1ddc7771c3da69defa72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/394a9645d7c9dac1938f1ddc7771c3da69defa72
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: introduce command \mathematica

Its definition is Mathematica, as is capitalized on
http://www.wolfram.com/mathematica/ .


  Commit: 436c58c817610c43cdf7ba51c1cd4b075204b86a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/436c58c817610c43cdf7ba51c1cd4b075204b86a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: insert \@ between a capital letter and \xspace

For a correct intersentence space.


  Commit: 37db89494608d3aa967b1cc72f80722612a7380f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37db89494608d3aa967b1cc72f80722612a7380f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add macros


  Commit: a2563e2698c7d53b3135c8b3096953a5c00c790b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a2563e2698c7d53b3135c8b3096953a5c00c790b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: follow up Peter's comment


  Commit: b81d62ce838e176d37e8feddecf675392e0d6816
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b81d62ce838e176d37e8feddecf675392e0d6816
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add section "Flexible Applications"


  Commit: 0f36ea84625ff1f44de141a65dc832a1cb24011c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0f36ea84625ff1f44de141a65dc832a1cb24011c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M src/error.hpp
    M src/root_finder.hpp

  Log Message:
  -----------
  disable GSL default error handler and check alloc function return types

The default error handler calls abort().  Since we check the return
types we will catch those errors.


  Commit: b44a5ec348ddd1d8c3e5faf99d088f05b49fcee0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b44a5ec348ddd1d8c3e5faf99d088f05b49fcee0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  use Broyden instead of Newton as it is much more stable

I just did a CMSSM parameter scan over tan(beta) from 1 to 45.
The newton method fails for some points with high tan(beta) and
is much slower than Broyden.


  Commit: 2424691fdbb4b7bc5d032d37ba2b345d018f0f8f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2424691fdbb4b7bc5d032d37ba2b345d018f0f8f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_root_finder.cpp

  Log Message:
  -----------
  test Broyden method as well


  Commit: 42123c7c2e099c6f68540c1ec2c948ac6496a83a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/42123c7c2e099c6f68540c1ec2c948ac6496a83a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M src/error.hpp

  Log Message:
  -----------
  remove additional space


  Commit: 177a7ddb5db59dc76d5893374bd21372bbe35262
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/177a7ddb5db59dc76d5893374bd21372bbe35262
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  make loop orders configurable and solve EWSB eqs. at susy scale


  Commit: 780849dde4d1bda7bb97eeb4873ffe17b75205c7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/780849dde4d1bda7bb97eeb4873ffe17b75205c7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  properly clear constraints


  Commit: 07dd95f31b323bf8dfbc96f6021af1da05c9c1aa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/07dd95f31b323bf8dfbc96f6021af1da05c9c1aa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  test EWSB for instable point

This point does not work when only gsl_multiroot_fsolver_hybrid and
gsl_multiroot_fsolver_hybrids are used.  It works with
gsl_multiroot_fsolver_broyden or gsl_multiroot_fsolver_newton .


  Commit: 1b26a2fa1eed34247dff20f26ee9eb448a57f27a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1b26a2fa1eed34247dff20f26ee9eb448a57f27a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: refer to Sec:SpecGenStruct in section "Adapting C++ code"


  Commit: e414c406669df4d607dbe63509064fe953bd4552
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e414c406669df4d607dbe63509064fe953bd4552
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: reduce repetition of "straightforward"


  Commit: e94906ad72b2d01e1ad27019eb58353aaed674d1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e94906ad72b2d01e1ad27019eb58353aaed674d1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: change "auto-generated" -> "out of the box"

Since the NUHMSSM executable is also auto-generated to some extent.


  Commit: 88b4b24e9dbfacfe8a1834fc3b1ef4fd3e28a183
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/88b4b24e9dbfacfe8a1834fc3b1ef4fd3e28a183
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M ChangeLog
    M doc/paper.tex
    M meta/FlexibleSUSY.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M templates/start.m.in

  Log Message:
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  set pole mass calculation precision in the model file


  Commit: de4b305cce45f35aeadf83aec8f516b476d3c4f6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/de4b305cce45f35aeadf83aec8f516b476d3c4f6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M templates/start.m.in

  Log Message:
  -----------
  set eigenstates and time constraints in the model file


  Commit: 359ab60c51368e5b6cf559087f4f3c1256d8174a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/359ab60c51368e5b6cf559087f4f3c1256d8174a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    A config/Makefile.customized-betas.in
    M configure
    A examples/customized-betas/LesHouches.in.MSSMcbs
    A examples/customized-betas/MSSMcbs_model.hpp
    A examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    A examples/customized-betas/MSSMcbs_two_scale_model.cpp
    A examples/customized-betas/MSSMcbs_two_scale_model.hpp
    A examples/customized-betas/custombetas.cpp

  Log Message:
  -----------
  Add example with customized beta functions

MSSM with 3-loop g3 beta function from an alternative source,
i.e. hand-written in this case.


  Commit: 2b816c7dc3c25334e2d314f976210869ba91684d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b816c7dc3c25334e2d314f976210869ba91684d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M examples/customized-betas/MSSMcbs_two_scale_model.cpp

  Log Message:
  -----------
  Change link to 3-loop MSSM beta function web page


  Commit: fab08d94a0f859f01e39829efd5f0e2c0f35ed07
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fab08d94a0f859f01e39829efd5f0e2c0f35ed07
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    A examples/customized-betas/run_example.sh
    M test/module.mk
    A test/test_run_examples.sh
    R test/test_tower.sh

  Log Message:
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  Test-run more examples


  Commit: ad39401f71381a2544d4f0da8c58e9aaf3077f63
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ad39401f71381a2544d4f0da8c58e9aaf3077f63
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fix typos in the introduction and add ref. for SuseFlav


  Commit: 851593c958bd6e1c2ea9b916c18cc01aa7161972
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/851593c958bd6e1c2ea9b916c18cc01aa7161972
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    A config/Makefile.customized-betas.in
    M configure
    A examples/customized-betas/LesHouches.in.MSSMcbs
    A examples/customized-betas/MSSMcbs_model.hpp
    A examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    A examples/customized-betas/MSSMcbs_two_scale_model.cpp
    A examples/customized-betas/MSSMcbs_two_scale_model.hpp
    A examples/customized-betas/custombetas.cpp
    A examples/customized-betas/run_example.sh
    M test/module.mk
    A test/test_run_examples.sh
    R test/test_tower.sh

  Log Message:
  -----------
  Merge branch 'feature-custom-betas' into development


  Commit: c0b0f0b5d0279704645f6b32d55e14cd7ff30975
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c0b0f0b5d0279704645f6b32d55e14cd7ff30975
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: 1bd6401046c8dc5ecf8efef5ef5a2fdc53d5d178
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1bd6401046c8dc5ecf8efef5ef5a2fdc53d5d178
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add to text on lapack


  Commit: 361b1f0dc7eac1c304f932040e9b7aa3b146c040
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/361b1f0dc7eac1c304f932040e9b7aa3b146c040
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Improvements suggested by Dominik


  Commit: 8a9b6dcc2006b20733a541c9788b32b00045f745
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8a9b6dcc2006b20733a541c9788b32b00045f745
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    A model_files/NMSSM/FlexibleSUSY.m.in
    R model_files/NMSSM/FlexibleSUSY.m.in

  Log Message:
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  remove executable flag


  Commit: 08cc2e39c0c0f9329279580d54b4eca44a9d87bc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/08cc2e39c0c0f9329279580d54b4eca44a9d87bc
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  extend section 4 a bit and give more quick start examples


  Commit: 6764adfd8a463a0d5c1f2a7f9477a980b4ab7ff2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6764adfd8a463a0d5c1f2a7f9477a980b4ab7ff2
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  use as GUT condition TLambda = Alambda * lambda


  Commit: b1babd2c67c2e10aabd79ed65529321b6be7cd9b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b1babd2c67c2e10aabd79ed65529321b6be7cd9b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  use proper shell command


  Commit: bfd5be7d683e0d3a79ea3015bd3c46fd21ef8beb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bfd5be7d683e0d3a79ea3015bd3c46fd21ef8beb
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  typo in the path to the SLHA file


  Commit: c18eaeaabcc71d9b7cee99b4cbd0e58934ab734e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c18eaeaabcc71d9b7cee99b4cbd0e58934ab734e
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Addressing Dominik's suggestions on section 5 (not finished yet)


  Commit: 7a97ad8231a34d7c5f7959b63c64644086ef784b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7a97ad8231a34d7c5f7959b63c64644086ef784b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  make clear that the Yukawa couplings are not calculated automatically

unless their values are set to Automatic.


  Commit: 48342e566162a4be9fcdf6dcf7859168753fbc63
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/48342e566162a4be9fcdf6dcf7859168753fbc63
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Revert "use proper shell command"

This reverts commit b1babd2c67c2e10aabd79ed65529321b6be7cd9b.

Conflicts:

	doc/paper.tex


  Commit: 5b71ae9c892103e0a641c5f9784a0a132e6a33f5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5b71ae9c892103e0a641c5f9784a0a132e6a33f5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: minor corrections


  Commit: 41fdee5bc1407c76ce5ed7868a560e524b7c4fda
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/41fdee5bc1407c76ce5ed7868a560e524b7c4fda
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: fix a dangling ref


  Commit: 5bdd14355b5df3f5bd044413f7217f4967912b7c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5bdd14355b5df3f5bd044413f7217f4967912b7c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add Higgs triplet expression for theta_W, as suggested by Dominik


  Commit: 403eb03d93cf8df808e43b640bbedb7f39a50686
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/403eb03d93cf8df808e43b640bbedb7f39a50686
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  note about tan(beta) resummation in Delta mb


  Commit: 62668b993db37a6103d819005c837b331902a4b7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/62668b993db37a6103d819005c837b331902a4b7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  add brief introduction to Section 5


  Commit: dd573a502b951acb80475b926e6341838ad30f72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dd573a502b951acb80475b926e6341838ad30f72
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  unify section references


  Commit: 4f3d05c1d234829e2ea02b85860c05c0635a5b7d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4f3d05c1d234829e2ea02b85860c05c0635a5b7d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  remover ref. to missing figure


  Commit: 87049d99678ff56ac6fda3ffd0cfd99e185714a3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/87049d99678ff56ac6fda3ffd0cfd99e185714a3
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  give a small introduction on what the SG does


  Commit: ff5e9e42599e6abba20cd9b461ed9b480ef28a99
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ff5e9e42599e6abba20cd9b461ed9b480ef28a99
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  adding Dominik's suggestions on the boundary condition sections


  Commit: 75602386fad19f1382b4ae943c6f256c4fc4ba29
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/75602386fad19f1382b4ae943c6f256c4fc4ba29
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  better wording


  Commit: aa96c10a6a93925b2f133758347308c121be557c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/aa96c10a6a93925b2f133758347308c121be557c
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  final suggestions from Dominik on section 6


  Commit: 63d940faf9b02ab5785dd475ec77f9db52065f62
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/63d940faf9b02ab5785dd475ec77f9db52065f62
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting typos


  Commit: d833237e88b0ac1737a635f4a470fa284f22b775
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d833237e88b0ac1737a635f4a470fa284f22b775
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  small typos


  Commit: b7059418a418beeb0676c2118138dc7df4d04c3c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b7059418a418beeb0676c2118138dc7df4d04c3c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  a little more style and typos


  Commit: 01111c28c29e809bb3ea9f52eae52d760d140dbf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/01111c28c29e809bb3ea9f52eae52d760d140dbf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  merge "Numeric tests" section into last "Tests" section


  Commit: 9d5ba2b4d4528cf6831fa638a5dd8504c7e19218
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9d5ba2b4d4528cf6831fa638a5dd8504c7e19218
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add conclusions and acknowledgments


  Commit: 84e5c7df37b19c0906a3595d92dd53d5d032e870
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/84e5c7df37b19c0906a3595d92dd53d5d032e870
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  make EWSB root finder configurable

This configuration option is a sectet at the moment and used for
testing only.  Currently, we're trying the GSL routines "Hybrid",
"HybridS" and "Broyden".  The Newton method might find additional
roots, but is much slower.

Note: BOOST supports root finding as well.  We should try this out at
some point.


  Commit: feb97737877a95ebd8e7db8aa15399b6b3f01bc7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/feb97737877a95ebd8e7db8aa15399b6b3f01bc7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/logger.hpp

  Log Message:
  -----------
  print warnings, errors and abort messages to std::cerr


  Commit: 3a5da448c39c91b57c69712aae802e1923c354dd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3a5da448c39c91b57c69712aae802e1923c354dd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M templates/run.cpp.in

  Log Message:
  -----------
  typo


  Commit: eb8589c6bd1a5890eafa55dbf78b9a85bbffa8af
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/eb8589c6bd1a5890eafa55dbf78b9a85bbffa8af
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M templates/info.cpp.in

  Log Message:
  -----------
  use "multiplets" instead of "particles"


  Commit: cedcde4574a1f834f898509016566ca8261f062b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cedcde4574a1f834f898509016566ca8261f062b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove comment about mu, Bmu in the initial guess


  Commit: bece630c84358ad1aa7c5a47647c701cfc7fba6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bece630c84358ad1aa7c5a47647c701cfc7fba6e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/wrappers.hpp
    M test/module.mk
    A test/test_goldstones.cpp

  Log Message:
  -----------
  adding test for reordering arrays according to closest masses


  Commit: 0de1959e3ce41410b25f7cbfc6f2d5723939cad8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0de1959e3ce41410b25f7cbfc6f2d5723939cad8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M test/test_goldstones.cpp

  Log Message:
  -----------
  reorder rows of corresponding mixing matrix


  Commit: 2b4e759ad221a14c65b6080b6ea8771758da4ed6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b4e759ad221a14c65b6080b6ea8771758da4ed6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/wrappers.hpp
    M test/test_goldstones.cpp

  Log Message:
  -----------
  move reordering function to wrappers module


  Commit: 73759bfac0c9b1aff2c209d186544ffb72dfdfd8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73759bfac0c9b1aff2c209d186544ffb72dfdfd8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  reorder Goldstone bosons


  Commit: e6c8aeb9e6c47a3661a5e146b550e84cab74f9e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e6c8aeb9e6c47a3661a5e146b550e84cab74f9e6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  remove unused function


  Commit: ce40c0bcd182d682448208108ab4d7151ecd8707
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ce40c0bcd182d682448208108ab4d7151ecd8707
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  correct function name


  Commit: 1ed7649c31235acc4df1a81b9a2e4830d84a8a2c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1ed7649c31235acc4df1a81b9a2e4830d84a8a2c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m
    M src/wrappers.hpp
    M test/test_goldstones.cpp

  Log Message:
  -----------
  better function name


  Commit: 6cb0e7b1cc9ddad4f93838634eff62ada62e869b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6cb0e7b1cc9ddad4f93838634eff62ada62e869b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  adding comment


  Commit: e5fcba595d296bd45dee7d6a5daba9337a31a72a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e5fcba595d296bd45dee7d6a5daba9337a31a72a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/LoopMasses.m
    M meta/TreeMasses.m

  Log Message:
  -----------
  reorder Goldstone bosons in the pole mass spectrum as well


  Commit: 3b3992845d5fc138caa76db46161f7645a600ba1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3b3992845d5fc138caa76db46161f7645a600ba1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
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  prepend new line


  Commit: b17c829e7cd9148cf0730848ff339ff0714afe39
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b17c829e7cd9148cf0730848ff339ff0714afe39
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M sarah/E6SSM/parameters.m
    M sarah/E6SSM/particles.m

  Log Message:
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  adding definitions for intermediate singlinos to E6SSM model file


  Commit: 2299958daee15e36ddf4c54332a8a5c3cfe0f2cf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2299958daee15e36ddf4c54332a8a5c3cfe0f2cf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  correcting descr. of initial guess for Yukawa couplinges


  Commit: 76ee54b00c65adea8e3041f8faaed9fbc9ffabb9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/76ee54b00c65adea8e3041f8faaed9fbc9ffabb9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  there are no alpha_b * alpha_tau corrections


  Commit: 9938943614b083e50dc4ba9099caf3fabab7fbea
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9938943614b083e50dc4ba9099caf3fabab7fbea
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M config/Makefile.customized-betas.in
    A examples/customized-betas/MSSMcbs_initial_guesser.hpp
    A examples/customized-betas/MSSMcbs_low_scale_constraint.hpp
    M examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    A examples/customized-betas/MSSMcbs_two_scale_initial_guesser.cpp
    A examples/customized-betas/MSSMcbs_two_scale_initial_guesser.hpp
    A examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.cpp
    A examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.hpp

  Log Message:
  -----------
  Do 2-loop matching of alpha_s in custom betas example


  Commit: e9fccd45f7778c9aaf3ca9fdeccf102dca8e6bc5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e9fccd45f7778c9aaf3ca9fdeccf102dca8e6bc5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: add section "Integrating custom C++ components"


  Commit: 422f4a3df0274483ed642e9e1eab54aa1dab736b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/422f4a3df0274483ed642e9e1eab54aa1dab736b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M meta/LoopMasses.m
    M meta/TreeMasses.m
    M src/wrappers.hpp
    M test/module.mk
    A test/test_goldstones.cpp

  Log Message:
  -----------
  Merge branch 'bugfix-goldstones' into development


  Commit: 72f4bb7cc6238e17124afed50fdea69a2443066d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/72f4bb7cc6238e17124afed50fdea69a2443066d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add to section "Adapting C++ code"


  Commit: 6276ace6d9391e3a4678cd5f0b6988de3d636c54
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6276ace6d9391e3a4678cd5f0b6988de3d636c54
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: minor corrections


  Commit: a0cd644932cfa1cce360ab556835254602e580c7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a0cd644932cfa1cce360ab556835254602e580c7
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: reminder of a complaint


  Commit: 95667927d11bbd7f690c70716a348973a6d5f1f6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/95667927d11bbd7f690c70716a348973a6d5f1f6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  adding helper function which checks a multiplet for Goldstone bosons


  Commit: 3bb17f04f000e7f6f9d56a95f309dd93959b6d77
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3bb17f04f000e7f6f9d56a95f309dd93959b6d77
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M src/linalg2.hpp

  Log Message:
  -----------
  adding helper function which sorts an Eigen::Array


  Commit: 78720e613d791b30a9905a6a28a242224303c9a4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/78720e613d791b30a9905a6a28a242224303c9a4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M src/linalg2.hpp
    M src/wrappers.hpp

  Log Message:
  -----------
  move sorting function to wrappers module


  Commit: 3c10f4b3b65d328d77f9fa846e830251de7cf04c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3c10f4b3b65d328d77f9fa846e830251de7cf04c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  Bugfix: sort momenta used for the self-energy calculation


  Commit: b23dc2699f1d86596ba301be023986b6c1f62973
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b23dc2699f1d86596ba301be023986b6c1f62973
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting complaint


  Commit: 6aa9ca9a4ac4e5d9693e2e789f6e2ccfff4ba269
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6aa9ca9a4ac4e5d9693e2e789f6e2ccfff4ba269
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M test/test_SMSSM_tree_level_spectrum.cpp

  Log Message:
  -----------
  correcting test: Goldstone bosons are now at the front


  Commit: 798f11bb30ca1233d6da40da2d55a8032bbe8105
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/798f11bb30ca1233d6da40da2d55a8032bbe8105
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M test/test_benchmark.cpp

  Log Message:
  -----------
  pipe cerr output to /dev/null


  Commit: 0177ef47452d8cc5e0b09f699d904dfbfcda7a39
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0177ef47452d8cc5e0b09f699d904dfbfcda7a39
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  e.g, --> e.g.~ in introduction.


  Commit: 4b4cfce02602244a2d9a20756e5e597469cc2e8f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4b4cfce02602244a2d9a20756e5e597469cc2e8f
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  slight grammar fix in introduction.  some sentences are still too long.


  Commit: 947dc6577ba6817c4bd999613e35c8687fd26720
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/947dc6577ba6817c4bd999613e35c8687fd26720
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Dominik's suggestions on sections 3-4


  Commit: 0559b4c9b5a5681cdfec9878b9e7359ed62d1d01
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0559b4c9b5a5681cdfec9878b9e7359ed62d1d01
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  grammar: Note,  -->  Note


  Commit: 9551851528cb3ccc47516f584d42c389b98799a3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9551851528cb3ccc47516f584d42c389b98799a3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  note about example for a pure low-energy model


  Commit: 8ec5fe254eb8449c3011e1053cfb44c7e3f56361
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8ec5fe254eb8449c3011e1053cfb44c7e3f56361
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  a little language improvement


  Commit: 6cf378698ba772323bc009687fc8b419614a94da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6cf378698ba772323bc009687fc8b419614a94da
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  update Program Summary


  Commit: 26876d54eb4785bff8f928ebea62bafd7610a266
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/26876d54eb4785bff8f928ebea62bafd7610a266
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: split command box for tower example

as Dominik suggested.


  Commit: 533db0ad1f130c2b8f18de5bec4ea7776aecfb15
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/533db0ad1f130c2b8f18de5bec4ea7776aecfb15
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  removed intance of y_b^2 y_\taui^2 since we don't inlcude these.


  Commit: 4785711e7134c3934c96f733c41e4c985219946e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4785711e7134c3934c96f733c41e4c985219946e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  the programming language used in the Mathmatica program is
called Wolfram

> Hi all,
>
> apparently, the programming language used in the Mathmatica program is
> called "Wolfram", although I am not sure how many people would recognize
> the name.  :)
>
>      http://en.wikipedia.org/wiki/Wolfram_Language
>      http://reference.wolfram.com/language
>
> Best,
> Jae-hyeon


  Commit: f1af8d45f7c3c899c2cccb33092f83a22c6e0131
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f1af8d45f7c3c899c2cccb33092f83a22c6e0131
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  typo


  Commit: de3bbe51fa94470c5d02e5951ff10e707d7bb209
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/de3bbe51fa94470c5d02e5951ff10e707d7bb209
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: corrections to section "Adapting C++ code"


  Commit: f34654ecb148740a4ebc5c05b2fabdb7e51c152a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f34654ecb148740a4ebc5c05b2fabdb7e51c152a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: highlight C++ comments except pseudo-codes


  Commit: 84ca179c15d8ad12d472f2c8b75128f46e90b620
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/84ca179c15d8ad12d472f2c8b75128f46e90b620
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Abstract with Dominik's suggestions


  Commit: 4ba416a5c21b34da7d74bf372a341101eb1cdf86
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4ba416a5c21b34da7d74bf372a341101eb1cdf86
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: differentiate between inheritance and component separation


  Commit: 2a4da508bb62dd9fcfaf6d7c126cb57d640437a5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2a4da508bb62dd9fcfaf6d7c126cb57d640437a5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: avoid redundancy

sharply ~ manifestly
divided ~ separate


  Commit: 5127c56766a6258d9e0dfd4f5a518c08cf90d537
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5127c56766a6258d9e0dfd4f5a518c08cf90d537
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  addressing Dominik's suggestions on section 7


  Commit: d690b4f1025937e36fcccc71ee7eea1ffa017b72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d690b4f1025937e36fcccc71ee7eea1ffa017b72
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  extend conclusions


  Commit: daff389089e952098ec52e7ec223386de345b6fb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/daff389089e952098ec52e7ec223386de345b6fb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    A test/test.sh

  Log Message:
  -----------
  adding file with shell helper scripts


  Commit: a59af6bb3ae9eadaa0f682e1aee7030c05be7cea
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a59af6bb3ae9eadaa0f682e1aee7030c05be7cea
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M TODO

  Log Message:
  -----------
  update TODO list


  Commit: fad7f8b17c677e3ffc8cfd24bf3f16fa54031519
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fad7f8b17c677e3ffc8cfd24bf3f16fa54031519
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add Bourne shell as language, delete word size


  Commit: 4643298f8b468bc22315b2190c74a9b76fb87bed
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4643298f8b468bc22315b2190c74a9b76fb87bed
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: change title of sec:quick-start-cmssm


  Commit: 742be2e5352bb8f30dfbded892649f411eba4742
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/742be2e5352bb8f30dfbded892649f411eba4742
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
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  Revert "Bugfix: sort momenta used for the self-energy calculation"

This reverts commit 3c10f4b3b65d328d77f9fa846e830251de7cf04c.


  Commit: ce3d9cbd389f9da25f91326c4180652628f24b2b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ce3d9cbd389f9da25f91326c4180652628f24b2b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LoopMasses.m
    M meta/TreeMasses.m
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M test/test_SMSSM_tree_level_spectrum.cpp

  Log Message:
  -----------
  reorder the goldstone bosons separately


  Commit: 6ab5262a5bbc235be9ece4a62a1c8f902c715ff0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6ab5262a5bbc235be9ece4a62a1c8f902c715ff0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
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  remove debug output


  Commit: 2a17f447c3a32238ca747628bbc0c2be4096c61a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2a17f447c3a32238ca747628bbc0c2be4096c61a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add and discuss model class methods for DR-bar and pole masses


  Commit: 6dab981fb86ff4e385f683301f298c824682aa29
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6dab981fb86ff4e385f683301f298c824682aa29
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  avoid term "out of the box"


  Commit: 3e54b05c3d4f20b640e3a1f25f5faa5fc73517d2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3e54b05c3d4f20b640e3a1f25f5faa5fc73517d2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  sort references


  Commit: 94a2084d95ab7fac4aa2f51d84683f75e8e27c66
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/94a2084d95ab7fac4aa2f51d84683f75e8e27c66
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    A model_files/E6SSMnew/FlexibleSUSY.m.in
    M sarah/E6SSMnew/E6SSMnew.m
    M sarah/E6SSMnew/parameters.m
    M sarah/E6SSMnew/particles.m

  Log Message:
  -----------
  added updated versions of E6SSMnew model files.


  Commit: 066cc2318267c0a4467c7f3e9249da827e491246
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/066cc2318267c0a4467c7f3e9249da827e491246
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M model_files/E6SSMnew/FlexibleSUSY.m.in

  Log Message:
  -----------
  added PotentialLSPParticles to E6SSMnew FlexibleSUSY model file.


  Commit: 37c1005f87c73023c64a08bfbc88eac0cc1b1545
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37c1005f87c73023c64a08bfbc88eac0cc1b1545
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    R model_files/E6SSMnew/FlexibleSUSY.m.in
    M sarah/E6SSM/E6SSM.m
    M sarah/E6SSM/parameters.m
    M sarah/E6SSM/particles.m
    R sarah/E6SSMnew/E6SSMnew.m
    R sarah/E6SSMnew/parameters.m
    R sarah/E6SSMnew/particles.m

  Log Message:
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  removed old E6SSM files and rteplaced with new ones from E6SSMnew.


  Commit: 8a0e0bbcab1c2a5ba2a360d4fdc7798e4b0d9262
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8a0e0bbcab1c2a5ba2a360d4fdc7798e4b0d9262
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  Log Message:
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  typo fix gauge-single -> gauge singlet


  Commit: 47c56e742ec34f4da7e726657fd86046ced55fc3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/47c56e742ec34f4da7e726657fd86046ced55fc3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    A model_files/E6SSM/LesHouches.in.E6SSM

  Log Message:
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  adding example E6SSM SLHA input file


  Commit: 27ef93f241ae3ccd6e8925217d6186dd5866e23e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/27ef93f241ae3ccd6e8925217d6186dd5866e23e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in

  Log Message:
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  reintroducing default setting for E6SSM mass eigenstates


  Commit: 51279623cad3d6dbb2ab66e534dbd08b2db57bce
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/51279623cad3d6dbb2ab66e534dbd08b2db57bce
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  Log Message:
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  inserted \linbreak to stop line overflow.


  Commit: 638b18a4cd82c00ad26312434232030f96d5c10b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/638b18a4cd82c00ad26312434232030f96d5c10b
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  for to -> to


  Commit: e3eb0066ff0f6cda14435e87c903039d313af443
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e3eb0066ff0f6cda14435e87c903039d313af443
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  extended conclusions.


  Commit: bf2c5fa0bb4a3f7b6e22a17d06e62055b97eb471
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf2c5fa0bb4a3f7b6e22a17d06e62055b97eb471
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: join a split command line


  Commit: 3c6bc89864e74fe45bd96c7f66ee1189c7e132a7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3c6bc89864e74fe45bd96c7f66ee1189c7e132a7
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  added paragraph on testing against CE6SSM.


  Commit: edd746eca5d065a6b3c6882233f7070986c5e663
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/edd746eca5d065a6b3c6882233f7070986c5e663
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: correct a likely typo


  Commit: 2bb50471a78c6e59700f92dd91b38340abea1043
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2bb50471a78c6e59700f92dd91b38340abea1043
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: relate a sentence better to the preceding one


  Commit: 3531d25704a8b1972540886ad559077380730681
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3531d25704a8b1972540886ad559077380730681
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    R sarah/myE6SSM/myE6SSM.m
    R sarah/myE6SSM/parameters.m
    R sarah/myE6SSM/particles.m

  Log Message:
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  removed sarah/myE6SSM from repository.


  Commit: 5b208ba1c9f9c05f8897a4f23b9f67bc2cca5dcb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5b208ba1c9f9c05f8897a4f23b9f67bc2cca5dcb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  update average run-time in the Program Summary


  Commit: 52ae6a75f296f9d5a7ebe71b11dda2db259573cd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/52ae6a75f296f9d5a7ebe71b11dda2db259573cd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/release

  Log Message:
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  update release procedure


  Commit: 1663196951142098547aabdd2b05e96fd576e4c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1663196951142098547aabdd2b05e96fd576e4c8
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: replace MacOS by Mac OS X

Mac OS was not Unix-like until version 9.


  Commit: f79b8aa8e161c2d50f50f1de9df0fb98797017b9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f79b8aa8e161c2d50f50f1de9df0fb98797017b9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  discussing problems during the iteration


  Commit: e67bf26be5bc35743f623c546544c2b72b9bf06c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e67bf26be5bc35743f623c546544c2b72b9bf06c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
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  simplify git archive command


  Commit: 9af0af1ca579a2c50ed9c0dcbf7d9a426e7f1ff3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9af0af1ca579a2c50ed9c0dcbf7d9a426e7f1ff3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
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  adding tikz-um.sty to the list of dependencies of the paper


  Commit: cbaea924610c68900148e0130a56f926d11d3446
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cbaea924610c68900148e0130a56f926d11d3446
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  adding release-paper target to simplify the upload on arxiv


  Commit: 5f753f8feaca4bebf0707c8e13bddbff7b531eee
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5f753f8feaca4bebf0707c8e13bddbff7b531eee
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added more to acknowledgements.


  Commit: 73ebfb8a62dbb56e06bcfe20368af5d1e6b20869
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73ebfb8a62dbb56e06bcfe20368af5d1e6b20869
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fixed typos in last edit.


  Commit: 706393d854e08fc4135d8ece270dd01ee757a90b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/706393d854e08fc4135d8ece270dd01ee757a90b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
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  add release-paper to list of phony targets


  Commit: adc5b13c73e0b0a72f3f6c159e2d29a9e38cfe6a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/adc5b13c73e0b0a72f3f6c159e2d29a9e38cfe6a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
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  adding comments to the SLHA MODSEL options


  Commit: c7bde18876c8300d47f6f3f021d0640b45a4c187
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c7bde18876c8300d47f6f3f021d0640b45a4c187
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M model_files/E6SSM/LesHouches.in.E6SSM
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM
    M model_files/UMSSM/LesHouches.in.UMSSM

  Log Message:
  -----------
  remove unupported default options from our example SLHA input files


  Commit: 18fa2dec94375b0e1aaac62bbd10acedcffbbd38
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/18fa2dec94375b0e1aaac62bbd10acedcffbbd38
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  added some dsicussion of problem issues. more to follow.


  Commit: 23a18c72c1a79a5ca7a1ac757832e68c3ea1ff02
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/23a18c72c1a79a5ca7a1ac757832e68c3ea1ff02
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  added stuff about E6SSM problems.  We cannot keep it in this form though.
But wnated to put it in temporarily to help explain to
Alex and Jae-hyeon.


  Commit: 2e1599fce2a3027c9461815cd2c2f4e33ea844fd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2e1599fce2a3027c9461815cd2c2f4e33ea844fd
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  added reference to jae-hyeon's lattice method as a possible solution to convergence problems.


  Commit: a0bc301fd8ba63bee907ddc524c4c5bfc3ff817d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a0bc301fd8ba63bee907ddc524c4c5bfc3ff817d
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added another sentcence regarding additional solver.


  Commit: fda3cea38e15894b1e0ddd826a904445c61019a0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fda3cea38e15894b1e0ddd826a904445c61019a0
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  spell check.


  Commit: 539fa9d14bc65bd964a4bcfe4622bfd449a543a7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/539fa9d14bc65bd964a4bcfe4622bfd449a543a7
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  removed detailed explanation of VEV problem. I think there is no way to
include this, but perhaps Jae-hyeon or Alex can suggest a cleanerf fix that
is more suitable.


  Commit: ea1f1c39da50f998e807be2fffc99b67a1231ba0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea1f1c39da50f998e807be2fffc99b67a1231ba0
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: add a little Zur├╝ckhaltung


  Commit: a5e402ca23cbaad4282aa5e159e979b04b584e63
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a5e402ca23cbaad4282aa5e159e979b04b584e63
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  fix two typos


  Commit: 29149a34a5a8db783934446c29714c56ec171196
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/29149a34a5a8db783934446c29714c56ec171196
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  make modifications suggested by Dominik


  Commit: 68df603f1b2ba3edb297b013a90660e92480d85a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/68df603f1b2ba3edb297b013a90660e92480d85a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: fix typos


  Commit: 0fe0aa7353206bf3bda1129b65ee3725470c492d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0fe0aa7353206bf3bda1129b65ee3725470c492d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: conform to -ize convention


  Commit: cd41c75b219620048c2f2c5842898e47813d8485
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cd41c75b219620048c2f2c5842898e47813d8485
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: match firstly ... secondly ...


  Commit: 6a3b2f0f91e8f942ec3844fa45eafcb19e481c2c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6a3b2f0f91e8f942ec3844fa45eafcb19e481c2c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: change capitalizations

See http://www.boost.org .


  Commit: 0cf95423400d4e80bca32045e2975ef6bf010552
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0cf95423400d4e80bca32045e2975ef6bf010552
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: trim optional trailing / from links


  Commit: 0391996686137a9e3dbdc01f406169c28f1cb407
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0391996686137a9e3dbdc01f406169c28f1cb407
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: trim optional trailing / from argument to cd


  Commit: 78971c92688f1931c4c1c550e63b6fa90bac239b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/78971c92688f1931c4c1c550e63b6fa90bac239b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: minor changes

Command line is not an output channel but an input.


  Commit: 2b3fa3d3babd09c7348eb61bd9bffeff15dde1b3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b3fa3d3babd09c7348eb61bd9bffeff15dde1b3
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: add/correct cross-references


  Commit: c8cb1ff377b77f028a3a0f1c5e1f5fbbcd8a0d33
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c8cb1ff377b77f028a3a0f1c5e1f5fbbcd8a0d33
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  added key words 'renormalization group equations' as per Jae-hyeon suggestion.


  Commit: f07664a353d3776e50eb162e6a0d790d843902ed
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f07664a353d3776e50eb162e6a0d790d843902ed
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  removed reference to FlexibleSUSY bugs in section 8 as per Jae-hyeon suggestion.


  Commit: b3708922d9ee9a3e0a31898516d84e409d0f3424
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b3708922d9ee9a3e0a31898516d84e409d0f3424
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  Changed obvious instance of FlexibleSUSY.m to FlexibleSUSY.m.in.
Thinking about how to calrify distinction elsewhere.


  Commit: 17618a9e09096630c0529defab261521dbab5e4d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/17618a9e09096630c0529defab261521dbab5e4d
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  added decription of how FlexibleSUSY takes FlexibleSUSY.m.in fle nad creates
FlexibleSUSY.m file to section 5. Alos changed the CMSSM file quoted
in paper to be FlexiblleSUSY.m.in file, replacing first line.


  Commit: 1861fa0e53186ac5c7c40f3347f30605c40b4637
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1861fa0e53186ac5c7c40f3347f30605c40b4637
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  FlexibleSUSY --> \fs in some places to make changing notation easier,
if we ever wish to do so.


  Commit: 607ecc523586b893e647d7a45d00d61b379ebe28
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/607ecc523586b893e647d7a45d00d61b379ebe28
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/E6SSM/LesHouches.in.E6SSM
    R sarah/E6SSM/E6SSM.m
    R sarah/E6SSM/parameters.m
    R sarah/E6SSM/particles.m

  Log Message:
  -----------
  deleted E6SSM files then replaced with new E6SSM FlexibleSUSY file for
GUT normalised charges.


  Commit: 2ba3af9fedbe31a9c853b3026beb9290c77a5ac4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2ba3af9fedbe31a9c853b3026beb9290c77a5ac4
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A sarah/E6SSM/E6SSM_altcharges.m
    A sarah/E6SSM/parameters.m
    A sarah/E6SSM/particles.m

  Log Message:
  -----------
  added sarah/E6SSM files from GUT normalised version.


  Commit: 407aef4d79b80bfc3eda9dc78871e6292911260a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/407aef4d79b80bfc3eda9dc78871e6292911260a
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A sarah/E6SSM/E6SSM.m
    R sarah/E6SSM/E6SSM_altcharges.m

  Log Message:
  -----------
  renamed sarah/E6SSM/E6SSM.m and changed model name inside accordingly.


  Commit: 3848d5bd156a9c27f4d8f3a7bd4f6f263be5ce24
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3848d5bd156a9c27f4d8f3a7bd4f6f263be5ce24
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  intergenerational -> inter-generational


  Commit: 2ae822408068e2688ca7e4f9c2f71353955f3251
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2ae822408068e2688ca7e4f9c2f71353955f3251
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  finished full spell check.


  Commit: ec9fbcf840202cf064193d44a07d753c4a52b414
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ec9fbcf840202cf064193d44a07d753c4a52b414
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A sarah/E6SSM/parameters.m
    R sarah/E6SSM/parameters.m
    A sarah/E6SSM/particles.m
    R sarah/E6SSM/particles.m

  Log Message:
  -----------
  remove executable flag from model files


  Commit: 9272010f9959b17d88dc4481bf83abd9189fb518
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9272010f9959b17d88dc4481bf83abd9189fb518
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A sarah/MSSMNoFV/MSSMNoFV.m
    R sarah/MSSMNoFV/MSSMNoFV.m
    R sarah/MSSMNoFV/parameters.m
    A sarah/MSSMNoFV/parameters.m
    A sarah/MSSMNoFV/particles.m
    R sarah/MSSMNoFV/particles.m

  Log Message:
  -----------
  remove executable flag from MSSMNoFV model files


  Commit: a5c66161097cce79bb1443f7f89d29368c16a65a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a5c66161097cce79bb1443f7f89d29368c16a65a
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  explain meaning of vT in Eq. (15)


  Commit: a54870eecd30005379773e7b8343e80774d071d5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a54870eecd30005379773e7b8343e80774d071d5
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  clarify the three categories of model parameters

We have now the following three terms:

  "SUSY parameters" := gauge couplings, VEVs,
                 superpotential parameters,

  "soft-breaking parameters := Girardello, Grisaru terms

  "all model parameters" := SUSY parameters + soft-breaking parameters


  Commit: 8db8f01aa59e9d9de36cfc6a5d8a0b9dc3eafd73
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8db8f01aa59e9d9de36cfc6a5d8a0b9dc3eafd73
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M model_files/E6SSM/LesHouches.in.E6SSM

  Log Message:
  -----------
  remove unsupported MODSEL entries from E6SSM example SLHA input file


  Commit: d02913c846a70ad0a359e28102426ce4c74e2598
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d02913c846a70ad0a359e28102426ce4c74e2598
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M meta/WeinbergAngle.m

  Log Message:
  -----------
  adding one line of debug output to avoid "stucking"

In some models it takes long to express the Weinberg angle in terms of
the model parameters.  This message tells the user that we're still
trying hardly.


  Commit: 68d9686f1f03de03eb4da795ebdf06c820d676e7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/68d9686f1f03de03eb4da795ebdf06c820d676e7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add missing \code{} wrapper commands


  Commit: 8f5d72453c60622ef61d29d624116383b28ecff4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8f5d72453c60622ef61d29d624116383b28ecff4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove \JH* macros


  Commit: aec6a864476a128abf339b5a56c1aac5414bb4f2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/aec6a864476a128abf339b5a56c1aac5414bb4f2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    M sarah/E6SSM/E6SSM.m
    M sarah/E6SSM/parameters.m
    R sarah/E6SSM/particles.m
    A sarah/E6SSM/particles.m

  Log Message:
  -----------
  Merge remote-tracking branch 'organization/E6SSM-GUT-norm-charges' into development


  Commit: b303298128fe3f858d451f4d88cc514d3c7b1e93
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b303298128fe3f858d451f4d88cc514d3c7b1e93
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  FS is a "Mathematica and C++ package"


  Commit: dbc83651516dd5159d5d3dedba3d80b239b9cdb9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dbc83651516dd5159d5d3dedba3d80b239b9cdb9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting citations for the two-loop tadpoles in the MSSM and NMSSM


  Commit: bec45353c001e893db675f8950594708529c4816
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bec45353c001e893db675f8950594708529c4816
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A model_files/MSSMRHN/FlexibleSUSY.m.in
    R model_files/MSSMRHN/FlexibleSUSY.m.in
    A model_files/SM/FlexibleSUSY.m.in
    R model_files/SM/FlexibleSUSY.m.in

  Log Message:
  -----------
  Strip executable permission from model files


  Commit: 810e60175fec6ba6788ae9aa755d97e4749d3194
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/810e60175fec6ba6788ae9aa755d97e4749d3194
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  explain superscript T and mention SLHA-2 convention


  Commit: 8c7904a4a8307f5afde63f58a03126e3159d5f31
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8c7904a4a8307f5afde63f58a03126e3159d5f31
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M README
    A config/references
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  adding references to publication on arXiv with temporary arXiv number


  Commit: 87ab7b49684b54df851f2622236e9337e38f6e03
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/87ab7b49684b54df851f2622236e9337e38f6e03
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  explain creation of model files and directories in a (hopefully) clearer way


  Commit: 73796f40a5ae39ee6199697dcfb6190bcbd4701d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73796f40a5ae39ee6199697dcfb6190bcbd4701d
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added extra references, so we refer to standard papers for the models.


  Commit: 7faef7daaa89979a47b8d3e08a082e95026a2192
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7faef7daaa89979a47b8d3e08a082e95026a2192
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Removed names from testin g sevction and mention instead user testing
modified acknowledgements slightly to reflect content taken out of
testing section.


  Commit: 376157a90a1b945a846885f1a70b62bd8ede84d7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/376157a90a1b945a846885f1a70b62bd8ede84d7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fix typos


  Commit: 0e58396adadcaa0606a81e580682d992f1ee3a8b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0e58396adadcaa0606a81e580682d992f1ee3a8b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fix another typo


  Commit: 4f064c6d46e3f8b207b178e432563bb88bbc0664
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4f064c6d46e3f8b207b178e432563bb88bbc0664
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  typo


  Commit: c2143bb35eb816632fb5b9f91a003b2ea9c72312
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c2143bb35eb816632fb5b9f91a003b2ea9c72312
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  stick to -ize convention


  Commit: 897b09c8904e9899cadeca2e625b0ce9a0ef6d2f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/897b09c8904e9899cadeca2e625b0ce9a0ef6d2f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: stress separation of physics from iteration procedure


  Commit: 3b7f8e7eae232b4af656c33c0780b2240c7e5017
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3b7f8e7eae232b4af656c33c0780b2240c7e5017
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A doc/flexiblesusy-paper.tex
    M doc/module.mk
    R doc/paper.tex

  Log Message:
  -----------
  rename paper TeX file


  Commit: 584f18fc170e624d2bd0c16273de1f01880ea812
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/584f18fc170e624d2bd0c16273de1f01880ea812
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  do not pack tikz-uml.sty together with the paper TeX file

However, if arXiv demands it, I'll re-add it.


  Commit: d3ba9046b6fa3eebc55a5cb2003c6c2354cbfec7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d3ba9046b6fa3eebc55a5cb2003c6c2354cbfec7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
  -----------
  Revert "do not pack tikz-uml.sty together with the paper TeX file"

This reverts commit 584f18fc170e624d2bd0c16273de1f01880ea812.

Arxiv does not have tikz-uml.sty


  Commit: 76deb36961e038c8748345b66c7377eb7341ce4e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/76deb36961e038c8748345b66c7377eb7341ce4e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  Add report numbers and acknowledgement


  Commit: 0caf9c5e1c0b1fc0e517874d03a07f340571dea9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0caf9c5e1c0b1fc0e517874d03a07f340571dea9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  Intel Xeon has 2 CPUs with 6 cores each


  Commit: e3543dc831f08181ee4cacdb66fa61268d47b3db
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e3543dc831f08181ee4cacdb66fa61268d47b3db
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  fix long line


  Commit: b6e240f035054ce92f389fd529ce46539dd887fc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b6e240f035054ce92f389fd529ce46539dd887fc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  correcting the intel Xeon machine type again

The machine has 2 CPUs of type Intel Xeon.
Each Xeon CPU has 6 physical cores.


  Commit: 8041e528aafed0830152c6f9f3837ec09dcf7a1d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8041e528aafed0830152c6f9f3837ec09dcf7a1d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  remove double References section title for arXiv


  Commit: 685c5d96f1c14388d227ac114d8893a81fa7fa85
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/685c5d96f1c14388d227ac114d8893a81fa7fa85
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M ChangeLog
    M configure

  Log Message:
  -----------
  version 1.0.0


Compare: https://github.com/FlexibleSUSY/FlexibleSUSY/compare/824fb7591030...685c5d96f1c1


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