[Flexiblesusy-commits] [FlexibleSUSY/FlexibleSUSY] 4f022b: Add default implementation of Composite_convergenc...

GitHub noreply at github.com
Mon Jul 28 19:44:45 BST 2014


  Branch: refs/heads/lattice
  Home:   https://github.com/FlexibleSUSY/FlexibleSUSY
  Commit: 4f022b63e81bbae8887d10016d9d06666fb3a8c9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4f022b63e81bbae8887d10016d9d06666fb3a8c9
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M src/two_scale_composite_convergence_tester.cpp
    M src/two_scale_composite_convergence_tester.hpp

  Log Message:
  -----------
  Add default implementation of Composite_convergence_tester::max_iterations()


  Commit: 3f60789aabd120061a6a24ca0516cb64dbc8c46e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3f60789aabd120061a6a24ca0516cb64dbc8c46e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp

  Log Message:
  -----------
  Use composite convergence tester in tower example


  Commit: 5f2f9fee4fd9897831bee7dcc2f4919589fec51f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5f2f9fee4fd9897831bee7dcc2f4919589fec51f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/module.mk

  Log Message:
  -----------
  examples/module.mk: eliminate lattice code


  Commit: 9951494290a1530c5e18b53690683fa40104d97d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9951494290a1530c5e18b53690683fa40104d97d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/module.mk

  Log Message:
  -----------
  examples/module.mk: add tower to STANDALONE_DIR

so that make distclean cleans the tower directory as well.


  Commit: 28cf6284edbf86a2aa26b64a614d8c862e1afd6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/28cf6284edbf86a2aa26b64a614d8c862e1afd6e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    A src/composite_convergence_tester.hpp
    M src/two_scale_composite_convergence_tester.cpp
    M src/two_scale_composite_convergence_tester.hpp

  Log Message:
  -----------
  Promote Composite_convergence_tester to a template


  Commit: 535746d7b82f4318839dedaf8c6ae06d8b1c10cc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/535746d7b82f4318839dedaf8c6ae06d8b1c10cc
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-27 (Tue, 27 May 2014)

  Changed paths:
    M src/module.mk

  Log Message:
  -----------
  src/module.mk: export composite_convergence_tester.hpp


  Commit: 7f9bd480f5a8e0b5018cd1b16532e9b40ab144b4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7f9bd480f5a8e0b5018cd1b16532e9b40ab144b4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  remove support for a default parameter point


  Commit: f3d80fb1f8b26f59b82aad60c01d0ea6c0cc9ee7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f3d80fb1f8b26f59b82aad60c01d0ea6c0cc9ee7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M doc/chapters/usage.tex
    M doc/paper.tex

  Log Message:
  -----------
  remove documentation of default parameter point


  Commit: e13a8b2409f16979f338f6f174a9cbc6f2fe3d38
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e13a8b2409f16979f338f6f174a9cbc6f2fe3d38
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMCPV/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  remove default parameter points from model files


  Commit: 3032ae5903dc9e1ce06e3b87068fd5d73efd17df
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3032ae5903dc9e1ce06e3b87068fd5d73efd17df
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    A model_files/UMSSM/LesHouches.in.UMSSM

  Log Message:
  -----------
  adding default SLHA input file for the UMSSM


  Commit: bbc987f15150c6e0b444af81df823b055c6edc7f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bbc987f15150c6e0b444af81df823b055c6edc7f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M templates/run.cpp.in

  Log Message:
  -----------
  exit with an error message if no SLHA input file is given


  Commit: 0e689a395f27e5e7612e110fa08184d437eea30a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0e689a395f27e5e7612e110fa08184d437eea30a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-28 (Wed, 28 May 2014)

  Changed paths:
    M test/test_MSSM.hpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  more initialization


  Commit: 828d12eb62e41a780180150f74b98753786e89bf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/828d12eb62e41a780180150f74b98753786e89bf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M test/test_MSSM.hpp
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_slha_output.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_MSSM_susy_scale_constraint.cpp

  Log Message:
  -----------
  initialize all input parameters


  Commit: 46ba0b6dfaf2859808d7108ea9a571261755c59b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/46ba0b6dfaf2859808d7108ea9a571261755c59b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M test/test_SMSSM.hpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  fix SMSSM tests


  Commit: 193707737449ec7af42121e212eb5b441dd24126
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/193707737449ec7af42121e212eb5b441dd24126
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.hpp.in

  Log Message:
  -----------
  split initialization of constraint state


  Commit: d9fb42756f78b24da58380cb82900dc2fb9d4e36
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d9fb42756f78b24da58380cb82900dc2fb9d4e36
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_self_energies.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_tree_level_spectrum.cpp

  Log Message:
  -----------
  fix NMSSM tests


  Commit: 8a2b1f59786772e223f9749273eba9d7d054de4e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8a2b1f59786772e223f9749273eba9d7d054de4e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_susy_parameters.cpp.in
    M templates/two_scale_susy_parameters.hpp.in
    M test/test_MSSM.hpp
    M test/test_MSSM_spectrum.cpp
    M test/test_NMSSM_spectrum.cpp

  Log Message:
  -----------
  consistent naming of input parameter setters


  Commit: 95055b2111a2de5573ba7eb92bd0fb8c78eaed50
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/95055b2111a2de5573ba7eb92bd0fb8c78eaed50
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  the SG cannot be run without a SLHA input file


  Commit: 061487f44fb9c432051a850a9bd8fe300d8721da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/061487f44fb9c432051a850a9bd8fe300d8721da
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/chapters/usage.tex
    M doc/paper.tex
    M meta/FlexibleSUSY.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMCPV/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    A model_files/UMSSM/LesHouches.in.UMSSM
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/run.cpp.in
    M templates/spectrum_generator.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_susy_parameters.cpp.in
    M templates/two_scale_susy_parameters.hpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.hpp.in
    M test/test_MSSM.hpp
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_slha_output.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_self_energies.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_tree_level_spectrum.cpp
    M test/test_SMSSM.hpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp

  Log Message:
  -----------
  Merge branch 'feature-no-default-pp' into development


  Commit: 8cff0edb6272327a68dc8db1019609c2f9b8c63d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8cff0edb6272327a68dc8db1019609c2f9b8c63d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp

  Log Message:
  -----------
  adapt tower example spectrum generator to recent interface change


  Commit: f034942259b232c1ef07e70beb0d0bb9d818de92
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f034942259b232c1ef07e70beb0d0bb9d818de92
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M src/two_scale_convergence_tester_skeleton.hpp

  Log Message:
  -----------
  Test convergence of scale in Convergence_tester_skeleton

Since it checks convergence of DRbar parameters.


  Commit: 389e977547912355eefb7f5c7365593aced2b3e5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/389e977547912355eefb7f5c7365593aced2b3e5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M src/module.mk
    A src/two_scale_convergence_tester_drbar.hpp
    R src/two_scale_convergence_tester_skeleton.hpp
    M templates/two_scale_convergence_tester.cpp.in
    M templates/two_scale_convergence_tester.hpp.in

  Log Message:
  -----------
  Rename Convergence_tester_skeleton to Convergence_tester_DRbar

Convergence_tester_DRbar is supposed to be a base class of convergence
testers that examine scale-dependent quantities such as DRbar masses.


  Commit: 35c5c9bb6d7dceac678a4be06ce3ec130e8c13e1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/35c5c9bb6d7dceac678a4be06ce3ec130e8c13e1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    A src/convergence_tester_drbar.hpp
    M src/module.mk
    M src/two_scale_convergence_tester_drbar.hpp

  Log Message:
  -----------
  Make Convergence_tester_DRbar available to other methods

The Convergence_tester_DRbar class template in
src/two_scale_convergence_tester_drbar.hpp is now a partial
specialization of that in src/convergence_tester_drbar.hpp.


  Commit: bf35aed924c11a42a2dc59a43ace711a24120f45
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf35aed924c11a42a2dc59a43ace711a24120f45
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    A src/convergence_tester_drbar.hpp
    M src/module.mk
    A src/two_scale_convergence_tester_drbar.hpp
    R src/two_scale_convergence_tester_skeleton.hpp
    M templates/two_scale_convergence_tester.cpp.in
    M templates/two_scale_convergence_tester.hpp.in

  Log Message:
  -----------
  Merge branch 'convergence-tester-drbar' into development


  Commit: f952f821da27413120612351abdfea599749fddc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f952f821da27413120612351abdfea599749fddc
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M templates/slha_io.cpp.in

  Log Message:
  -----------
  Output full name of an author


  Commit: 1c73c62a534ee38a6cadf15d21f34180b893938b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1c73c62a534ee38a6cadf15d21f34180b893938b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove example models E6SSM and NMSSM from the appendix


  Commit: 01fbd60566ca315ba71c869f456ed8fbdd2034f2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/01fbd60566ca315ba71c869f456ed8fbdd2034f2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-29 (Thu, 29 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  typo


  Commit: da8b589cf7e28fa41f345e3807475392064b84e4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/da8b589cf7e28fa41f345e3807475392064b84e4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting description of SM fermion mass calculation.

Note: mt is calculated from mt^pole.  The top self-energies miss the
pure QCD corrections, which are added separately.  mb and mtau are
calculated from MS-bar/DR-bar masses, which already contain photon and
QCD contributions.  Therefore in Sigma_{b,tau} these contributions
must be omitted.


  Commit: 20e465e4b583e5d33ef12eac1a582d88a9b622fb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/20e465e4b583e5d33ef12eac1a582d88a9b622fb
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M src/two_scale_convergence_tester_drbar.hpp

  Log Message:
  -----------
  two_scale_convergence_tester_drbar.hpp: do not include wrappers.hpp

wrappers.hpp would include Eigen even though some models do not need
it.


  Commit: 79fef953f4820c5bc537727359822400f8c3fc5f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/79fef953f4820c5bc537727359822400f8c3fc5f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.hpp
    M models/smcw/smcw_two_scale_convergence_tester.cpp
    M models/smcw/smcw_two_scale_convergence_tester.hpp

  Log Message:
  -----------
  Eliminate remaining Convergence_tester_skeleton dependency

By replacing it with Convergence_tester_DRbar.


  Commit: ba8af541561fafd0543963d40ac0764fe693ec2c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ba8af541561fafd0543963d40ac0764fe693ec2c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: replace --models= by --name= in createmodel command


  Commit: fb3f57835398c0b8f32a1be278f4da147486bdad
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fb3f57835398c0b8f32a1be278f4da147486bdad
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: shorten an execution command


  Commit: 44509be3c42987c03068bab21777aa6567b459ab
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/44509be3c42987c03068bab21777aa6567b459ab
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M sarah/E6SSM/E6SSM.m

  Log Message:
  -----------
  Bugfix: mix inert singlets for SARAH 4.2

SARAH 4.2 does not calculate the mixing matrix for the fermionic inert
singlet fields if their mixing is not defined.  This commit mixes the
singlets.


  Commit: 035ffc7d4ba1f86eaafd82ff4fa6183581c072e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/035ffc7d4ba1f86eaafd82ff4fa6183581c072e6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-30 (Fri, 30 May 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  fix warning

Since SARAH 4.2 the list SARAH`Masses[EWSB] contains elements of the
form `0 -> MassGiven[VG]' for vector bosons, for examples

  {0 -> MassGiven[VG],
   Mass[gG] -> MassGiven[gG],
   Mass[Glu] -> MassRead[Glu],
   Mass[Fv[1]] -> MassGiven[Fv[1]],
   ... }

For these elements GetHead[#[[1,1]]] produces an error, since `0' is
not a list.  This commit fixes the bug by filtering only elements out
which are of the form

   SARAH`Mass[p_] -> _


  Commit: f4db17a60287749d9483d97dd4640750ea955210
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f4db17a60287749d9483d97dd4640750ea955210
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-31 (Sat, 31 May 2014)

  Changed paths:
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM

  Log Message:
  -----------
  LesHouches.in.NUHMSSM: fix cases in comments


  Commit: ddb9c0175916b09a3171f69848fff19bb73bc09b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ddb9c0175916b09a3171f69848fff19bb73bc09b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-05-31 (Sat, 31 May 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: update address


  Commit: 3218c0ff7b91e566f91a0452df6ff7502bc98425
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3218c0ff7b91e566f91a0452df6ff7502bc98425
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-05-31 (Sat, 31 May 2014)

  Changed paths:
    M model_files/MRSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  Workaround for the Weinberg angle in the MRSSM in SARAH 4.2.2

SARAH 4.2.2 defines Weinberg angle as

  {ThetaW, { Description -> "Weinberg-Angle",
       DependenceNum -> None,
       Value -> 0.511621}},

However, we currently need its analytic expression in terms of MW and
MZ.  This workaround puts the analytic expression back into
SARAH`ParameterDefinitions.


  Commit: 5bd7c1511783bb0898eaa83901af243dde5299ee
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5bd7c1511783bb0898eaa83901af243dde5299ee
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-01 (Sun, 01 Jun 2014)

  Changed paths:
    M templates/plot_spectrum.gnuplot.in

  Log Message:
  -----------
  plot lines instead of boxes


  Commit: a4325e161768f7e9980a3f8afb3a1bf35977ec5f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a4325e161768f7e9980a3f8afb3a1bf35977ec5f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-01 (Sun, 01 Jun 2014)

  Changed paths:
    M test/module.mk
    M test/test_root_finder.cpp

  Log Message:
  -----------
  test all root solvers and monitor the function calls


  Commit: e69eaac8e0608e015f1c20fa05a883cb4de875a8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e69eaac8e0608e015f1c20fa05a883cb4de875a8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-01 (Sun, 01 Jun 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  add newton to list of root finders

I found that when scanning over tan(beta) in the MSSM some points are
invalid due to "no ewsb" errors.  It seems that both
gsl_multiroot_fsolver_hybrid and gsl_multiroot_fsolver_hybrids can
sometimes not find a solution with the required precision.  But when I
add Newton's method some more points work!

Example point which fails with gsl_multiroot_fsolver_hybrid and
gsl_multiroot_fsolver_hybrids, but works with
gsl_multiroot_fsolver_dnewton :

Block MODSEL                 # Select model
    1    1                   # mSUGRA
    3    0                   # MSSM
Block FlexibleSUSY
    0   1.000000000e-04      # precision goal
    1   0                    # max. iterations (0 = automatic)
    2   0                    # algorithm (0 = two_scale, 1 = lattice)
    3   0                    # calculate SM pole masses
    4   2                    # pole mass loop order
    5   2                    # EWSB loop order
    6   2                    # beta-functions loop order
    7   1                    # threshold corrections (0 = disabled, 1 = enabled)
Block SMINPUTS               # Standard Model inputs
    1   1.279340000e+02      # alpha^(-1) SM MSbar(MZ)
    2   1.166370000e-05      # G_Fermi
    3   1.176000000e-01      # alpha_s(MZ) SM MSbar
    4   9.118760000e+01      # MZ(pole)
    5   4.200000000e+00      # mb(mb) SM MSbar
    6   1.733000000e+02      # mtop(pole)
    7   1.777000000e+00      # mtau(pole)
    8   0.000000000e+00      # mnu3(pole)
   11   5.109989020e-04      # melectron(pole)
   12   0.000000000e+00      # mnu1(pole)
   13   1.056583570e-01      # mmuon(pole)
   14   0.000000000e+00      # mnu2(pole)
   21   4.750000000e-03      # md(2 GeV)
   22   2.400000000e-03      # mu(2 GeV)
   23   1.040000000e-01      # ms(2 GeV)
   24   1.270000000e+00      # mc(2 GeV)
Block MINPAR                 # Input parameters
    1   5000.                # m0
    2   5000.                # m12
    3   22.45                # TanBeta
    4   1                    # SignMu
    5   5000.                # Azero
Block EXTPAR
    0   0                    # unification scale (0 = automatic)


  Commit: ab0ef8da89a15aba0a201f2cb20b0bbc42af6f88
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ab0ef8da89a15aba0a201f2cb20b0bbc42af6f88
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  meta/FlexibleSUSY.m: do not process lattice C++ source files


  Commit: 37234f400472c91b5acfb1876f42fd5ae9cc8919
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37234f400472c91b5acfb1876f42fd5ae9cc8919
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp

  Log Message:
  -----------
  Adapt tower example to commit 096fb02e2d0637a87ad22a7b776a5a71dfb980a8


  Commit: 628507917be158e4e938f9301075a78a21c3e1c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/628507917be158e4e938f9301075a78a21c3e1c8
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.hpp

  Log Message:
  -----------
  Add model suffixes to more variable names in tower example

For the sake of coherence.


  Commit: 394a9645d7c9dac1938f1ddc7771c3da69defa72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/394a9645d7c9dac1938f1ddc7771c3da69defa72
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: introduce command \mathematica

Its definition is Mathematica, as is capitalized on
http://www.wolfram.com/mathematica/ .


  Commit: 436c58c817610c43cdf7ba51c1cd4b075204b86a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/436c58c817610c43cdf7ba51c1cd4b075204b86a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: insert \@ between a capital letter and \xspace

For a correct intersentence space.


  Commit: 37db89494608d3aa967b1cc72f80722612a7380f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37db89494608d3aa967b1cc72f80722612a7380f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add macros


  Commit: a2563e2698c7d53b3135c8b3096953a5c00c790b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a2563e2698c7d53b3135c8b3096953a5c00c790b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: follow up Peter's comment


  Commit: b81d62ce838e176d37e8feddecf675392e0d6816
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b81d62ce838e176d37e8feddecf675392e0d6816
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add section "Flexible Applications"


  Commit: 0f36ea84625ff1f44de141a65dc832a1cb24011c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0f36ea84625ff1f44de141a65dc832a1cb24011c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M src/error.hpp
    M src/root_finder.hpp

  Log Message:
  -----------
  disable GSL default error handler and check alloc function return types

The default error handler calls abort().  Since we check the return
types we will catch those errors.


  Commit: b44a5ec348ddd1d8c3e5faf99d088f05b49fcee0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b44a5ec348ddd1d8c3e5faf99d088f05b49fcee0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  use Broyden instead of Newton as it is much more stable

I just did a CMSSM parameter scan over tan(beta) from 1 to 45.
The newton method fails for some points with high tan(beta) and
is much slower than Broyden.


  Commit: 2424691fdbb4b7bc5d032d37ba2b345d018f0f8f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2424691fdbb4b7bc5d032d37ba2b345d018f0f8f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_root_finder.cpp

  Log Message:
  -----------
  test Broyden method as well


  Commit: 42123c7c2e099c6f68540c1ec2c948ac6496a83a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/42123c7c2e099c6f68540c1ec2c948ac6496a83a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M src/error.hpp

  Log Message:
  -----------
  remove additional space


  Commit: 177a7ddb5db59dc76d5893374bd21372bbe35262
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/177a7ddb5db59dc76d5893374bd21372bbe35262
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  make loop orders configurable and solve EWSB eqs. at susy scale


  Commit: 780849dde4d1bda7bb97eeb4873ffe17b75205c7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/780849dde4d1bda7bb97eeb4873ffe17b75205c7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  properly clear constraints


  Commit: 07dd95f31b323bf8dfbc96f6021af1da05c9c1aa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/07dd95f31b323bf8dfbc96f6021af1da05c9c1aa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M test/test_MSSM_spectrum.cpp

  Log Message:
  -----------
  test EWSB for instable point

This point does not work when only gsl_multiroot_fsolver_hybrid and
gsl_multiroot_fsolver_hybrids are used.  It works with
gsl_multiroot_fsolver_broyden or gsl_multiroot_fsolver_newton .


  Commit: 1b26a2fa1eed34247dff20f26ee9eb448a57f27a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1b26a2fa1eed34247dff20f26ee9eb448a57f27a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: refer to Sec:SpecGenStruct in section "Adapting C++ code"


  Commit: e414c406669df4d607dbe63509064fe953bd4552
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e414c406669df4d607dbe63509064fe953bd4552
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: reduce repetition of "straightforward"


  Commit: e94906ad72b2d01e1ad27019eb58353aaed674d1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e94906ad72b2d01e1ad27019eb58353aaed674d1
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: change "auto-generated" -> "out of the box"

Since the NUHMSSM executable is also auto-generated to some extent.


  Commit: 88b4b24e9dbfacfe8a1834fc3b1ef4fd3e28a183
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/88b4b24e9dbfacfe8a1834fc3b1ef4fd3e28a183
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M ChangeLog
    M doc/paper.tex
    M meta/FlexibleSUSY.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M templates/start.m.in

  Log Message:
  -----------
  set pole mass calculation precision in the model file


  Commit: de4b305cce45f35aeadf83aec8f516b476d3c4f6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/de4b305cce45f35aeadf83aec8f516b476d3c4f6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    M templates/start.m.in

  Log Message:
  -----------
  set eigenstates and time constraints in the model file


  Commit: 359ab60c51368e5b6cf559087f4f3c1256d8174a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/359ab60c51368e5b6cf559087f4f3c1256d8174a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-02 (Mon, 02 Jun 2014)

  Changed paths:
    A config/Makefile.customized-betas.in
    M configure
    A examples/customized-betas/LesHouches.in.MSSMcbs
    A examples/customized-betas/MSSMcbs_model.hpp
    A examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    A examples/customized-betas/MSSMcbs_two_scale_model.cpp
    A examples/customized-betas/MSSMcbs_two_scale_model.hpp
    A examples/customized-betas/custombetas.cpp

  Log Message:
  -----------
  Add example with customized beta functions

MSSM with 3-loop g3 beta function from an alternative source,
i.e. hand-written in this case.


  Commit: 2b816c7dc3c25334e2d314f976210869ba91684d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b816c7dc3c25334e2d314f976210869ba91684d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M examples/customized-betas/MSSMcbs_two_scale_model.cpp

  Log Message:
  -----------
  Change link to 3-loop MSSM beta function web page


  Commit: fab08d94a0f859f01e39829efd5f0e2c0f35ed07
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fab08d94a0f859f01e39829efd5f0e2c0f35ed07
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    A examples/customized-betas/run_example.sh
    M test/module.mk
    A test/test_run_examples.sh
    R test/test_tower.sh

  Log Message:
  -----------
  Test-run more examples


  Commit: ad39401f71381a2544d4f0da8c58e9aaf3077f63
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ad39401f71381a2544d4f0da8c58e9aaf3077f63
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fix typos in the introduction and add ref. for SuseFlav


  Commit: 851593c958bd6e1c2ea9b916c18cc01aa7161972
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/851593c958bd6e1c2ea9b916c18cc01aa7161972
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    A config/Makefile.customized-betas.in
    M configure
    A examples/customized-betas/LesHouches.in.MSSMcbs
    A examples/customized-betas/MSSMcbs_model.hpp
    A examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    A examples/customized-betas/MSSMcbs_two_scale_model.cpp
    A examples/customized-betas/MSSMcbs_two_scale_model.hpp
    A examples/customized-betas/custombetas.cpp
    A examples/customized-betas/run_example.sh
    M test/module.mk
    A test/test_run_examples.sh
    R test/test_tower.sh

  Log Message:
  -----------
  Merge branch 'feature-custom-betas' into development


  Commit: c0b0f0b5d0279704645f6b32d55e14cd7ff30975
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c0b0f0b5d0279704645f6b32d55e14cd7ff30975
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: 1bd6401046c8dc5ecf8efef5ef5a2fdc53d5d178
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1bd6401046c8dc5ecf8efef5ef5a2fdc53d5d178
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add to text on lapack


  Commit: 361b1f0dc7eac1c304f932040e9b7aa3b146c040
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/361b1f0dc7eac1c304f932040e9b7aa3b146c040
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Improvements suggested by Dominik


  Commit: 8a9b6dcc2006b20733a541c9788b32b00045f745
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8a9b6dcc2006b20733a541c9788b32b00045f745
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Log Message:
  -----------
  remove executable flag


  Commit: 08cc2e39c0c0f9329279580d54b4eca44a9d87bc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/08cc2e39c0c0f9329279580d54b4eca44a9d87bc
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  extend section 4 a bit and give more quick start examples


  Commit: 6764adfd8a463a0d5c1f2a7f9477a980b4ab7ff2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6764adfd8a463a0d5c1f2a7f9477a980b4ab7ff2
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  use as GUT condition TLambda = Alambda * lambda


  Commit: b1babd2c67c2e10aabd79ed65529321b6be7cd9b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b1babd2c67c2e10aabd79ed65529321b6be7cd9b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  use proper shell command


  Commit: bfd5be7d683e0d3a79ea3015bd3c46fd21ef8beb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bfd5be7d683e0d3a79ea3015bd3c46fd21ef8beb
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  typo in the path to the SLHA file


  Commit: c18eaeaabcc71d9b7cee99b4cbd0e58934ab734e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c18eaeaabcc71d9b7cee99b4cbd0e58934ab734e
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Addressing Dominik's suggestions on section 5 (not finished yet)


  Commit: 7a97ad8231a34d7c5f7959b63c64644086ef784b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7a97ad8231a34d7c5f7959b63c64644086ef784b
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  make clear that the Yukawa couplings are not calculated automatically

unless their values are set to Automatic.


  Commit: 48342e566162a4be9fcdf6dcf7859168753fbc63
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/48342e566162a4be9fcdf6dcf7859168753fbc63
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Revert "use proper shell command"

This reverts commit b1babd2c67c2e10aabd79ed65529321b6be7cd9b.

Conflicts:

	doc/paper.tex


  Commit: 5b71ae9c892103e0a641c5f9784a0a132e6a33f5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5b71ae9c892103e0a641c5f9784a0a132e6a33f5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: minor corrections


  Commit: 41fdee5bc1407c76ce5ed7868a560e524b7c4fda
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/41fdee5bc1407c76ce5ed7868a560e524b7c4fda
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: fix a dangling ref


  Commit: 5bdd14355b5df3f5bd044413f7217f4967912b7c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5bdd14355b5df3f5bd044413f7217f4967912b7c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add Higgs triplet expression for theta_W, as suggested by Dominik


  Commit: 403eb03d93cf8df808e43b640bbedb7f39a50686
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/403eb03d93cf8df808e43b640bbedb7f39a50686
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-03 (Tue, 03 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  note about tan(beta) resummation in Delta mb


  Commit: 62668b993db37a6103d819005c837b331902a4b7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/62668b993db37a6103d819005c837b331902a4b7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add brief introduction to Section 5


  Commit: dd573a502b951acb80475b926e6341838ad30f72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dd573a502b951acb80475b926e6341838ad30f72
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  unify section references


  Commit: 4f3d05c1d234829e2ea02b85860c05c0635a5b7d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4f3d05c1d234829e2ea02b85860c05c0635a5b7d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remover ref. to missing figure


  Commit: 87049d99678ff56ac6fda3ffd0cfd99e185714a3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/87049d99678ff56ac6fda3ffd0cfd99e185714a3
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  give a small introduction on what the SG does


  Commit: ff5e9e42599e6abba20cd9b461ed9b480ef28a99
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ff5e9e42599e6abba20cd9b461ed9b480ef28a99
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  adding Dominik's suggestions on the boundary condition sections


  Commit: 75602386fad19f1382b4ae943c6f256c4fc4ba29
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/75602386fad19f1382b4ae943c6f256c4fc4ba29
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  better wording


  Commit: aa96c10a6a93925b2f133758347308c121be557c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/aa96c10a6a93925b2f133758347308c121be557c
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  final suggestions from Dominik on section 6


  Commit: 63d940faf9b02ab5785dd475ec77f9db52065f62
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/63d940faf9b02ab5785dd475ec77f9db52065f62
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting typos


  Commit: d833237e88b0ac1737a635f4a470fa284f22b775
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d833237e88b0ac1737a635f4a470fa284f22b775
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  small typos


  Commit: b7059418a418beeb0676c2118138dc7df4d04c3c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b7059418a418beeb0676c2118138dc7df4d04c3c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  a little more style and typos


  Commit: 01111c28c29e809bb3ea9f52eae52d760d140dbf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/01111c28c29e809bb3ea9f52eae52d760d140dbf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  merge "Numeric tests" section into last "Tests" section


  Commit: 9d5ba2b4d4528cf6831fa638a5dd8504c7e19218
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9d5ba2b4d4528cf6831fa638a5dd8504c7e19218
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add conclusions and acknowledgments


  Commit: 84e5c7df37b19c0906a3595d92dd53d5d032e870
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/84e5c7df37b19c0906a3595d92dd53d5d032e870
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-04 (Wed, 04 Jun 2014)

  Changed paths:
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  make EWSB root finder configurable

This configuration option is a sectet at the moment and used for
testing only.  Currently, we're trying the GSL routines "Hybrid",
"HybridS" and "Broyden".  The Newton method might find additional
roots, but is much slower.

Note: BOOST supports root finding as well.  We should try this out at
some point.


  Commit: feb97737877a95ebd8e7db8aa15399b6b3f01bc7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/feb97737877a95ebd8e7db8aa15399b6b3f01bc7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/logger.hpp

  Log Message:
  -----------
  print warnings, errors and abort messages to std::cerr


  Commit: 3a5da448c39c91b57c69712aae802e1923c354dd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3a5da448c39c91b57c69712aae802e1923c354dd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M templates/run.cpp.in

  Log Message:
  -----------
  typo


  Commit: eb8589c6bd1a5890eafa55dbf78b9a85bbffa8af
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/eb8589c6bd1a5890eafa55dbf78b9a85bbffa8af
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M templates/info.cpp.in

  Log Message:
  -----------
  use "multiplets" instead of "particles"


  Commit: cedcde4574a1f834f898509016566ca8261f062b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cedcde4574a1f834f898509016566ca8261f062b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove comment about mu, Bmu in the initial guess


  Commit: bece630c84358ad1aa7c5a47647c701cfc7fba6e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bece630c84358ad1aa7c5a47647c701cfc7fba6e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/wrappers.hpp
    M test/module.mk
    A test/test_goldstones.cpp

  Log Message:
  -----------
  adding test for reordering arrays according to closest masses


  Commit: 0de1959e3ce41410b25f7cbfc6f2d5723939cad8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0de1959e3ce41410b25f7cbfc6f2d5723939cad8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M test/test_goldstones.cpp

  Log Message:
  -----------
  reorder rows of corresponding mixing matrix


  Commit: 2b4e759ad221a14c65b6080b6ea8771758da4ed6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b4e759ad221a14c65b6080b6ea8771758da4ed6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/wrappers.hpp
    M test/test_goldstones.cpp

  Log Message:
  -----------
  move reordering function to wrappers module


  Commit: 73759bfac0c9b1aff2c209d186544ffb72dfdfd8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73759bfac0c9b1aff2c209d186544ffb72dfdfd8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  reorder Goldstone bosons


  Commit: e6c8aeb9e6c47a3661a5e146b550e84cab74f9e6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e6c8aeb9e6c47a3661a5e146b550e84cab74f9e6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  remove unused function


  Commit: ce40c0bcd182d682448208108ab4d7151ecd8707
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ce40c0bcd182d682448208108ab4d7151ecd8707
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  correct function name


  Commit: 1ed7649c31235acc4df1a81b9a2e4830d84a8a2c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1ed7649c31235acc4df1a81b9a2e4830d84a8a2c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m
    M src/wrappers.hpp
    M test/test_goldstones.cpp

  Log Message:
  -----------
  better function name


  Commit: 6cb0e7b1cc9ddad4f93838634eff62ada62e869b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6cb0e7b1cc9ddad4f93838634eff62ada62e869b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  adding comment


  Commit: e5fcba595d296bd45dee7d6a5daba9337a31a72a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e5fcba595d296bd45dee7d6a5daba9337a31a72a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/LoopMasses.m
    M meta/TreeMasses.m

  Log Message:
  -----------
  reorder Goldstone bosons in the pole mass spectrum as well


  Commit: 3b3992845d5fc138caa76db46161f7645a600ba1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3b3992845d5fc138caa76db46161f7645a600ba1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  prepend new line


  Commit: b17c829e7cd9148cf0730848ff339ff0714afe39
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b17c829e7cd9148cf0730848ff339ff0714afe39
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M sarah/E6SSM/parameters.m
    M sarah/E6SSM/particles.m

  Log Message:
  -----------
  adding definitions for intermediate singlinos to E6SSM model file


  Commit: 2299958daee15e36ddf4c54332a8a5c3cfe0f2cf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2299958daee15e36ddf4c54332a8a5c3cfe0f2cf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting descr. of initial guess for Yukawa couplinges


  Commit: 76ee54b00c65adea8e3041f8faaed9fbc9ffabb9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/76ee54b00c65adea8e3041f8faaed9fbc9ffabb9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-05 (Thu, 05 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  there are no alpha_b * alpha_tau corrections


  Commit: 9938943614b083e50dc4ba9099caf3fabab7fbea
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9938943614b083e50dc4ba9099caf3fabab7fbea
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M config/Makefile.customized-betas.in
    A examples/customized-betas/MSSMcbs_initial_guesser.hpp
    A examples/customized-betas/MSSMcbs_low_scale_constraint.hpp
    M examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    A examples/customized-betas/MSSMcbs_two_scale_initial_guesser.cpp
    A examples/customized-betas/MSSMcbs_two_scale_initial_guesser.hpp
    A examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.cpp
    A examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.hpp

  Log Message:
  -----------
  Do 2-loop matching of alpha_s in custom betas example


  Commit: e9fccd45f7778c9aaf3ca9fdeccf102dca8e6bc5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e9fccd45f7778c9aaf3ca9fdeccf102dca8e6bc5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add section "Integrating custom C++ components"


  Commit: 422f4a3df0274483ed642e9e1eab54aa1dab736b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/422f4a3df0274483ed642e9e1eab54aa1dab736b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M meta/LoopMasses.m
    M meta/TreeMasses.m
    M src/wrappers.hpp
    M test/module.mk
    A test/test_goldstones.cpp

  Log Message:
  -----------
  Merge branch 'bugfix-goldstones' into development


  Commit: 72f4bb7cc6238e17124afed50fdea69a2443066d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/72f4bb7cc6238e17124afed50fdea69a2443066d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add to section "Adapting C++ code"


  Commit: 6276ace6d9391e3a4678cd5f0b6988de3d636c54
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6276ace6d9391e3a4678cd5f0b6988de3d636c54
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: minor corrections


  Commit: a0cd644932cfa1cce360ab556835254602e580c7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a0cd644932cfa1cce360ab556835254602e580c7
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: reminder of a complaint


  Commit: 95667927d11bbd7f690c70716a348973a6d5f1f6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/95667927d11bbd7f690c70716a348973a6d5f1f6
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  adding helper function which checks a multiplet for Goldstone bosons


  Commit: 3bb17f04f000e7f6f9d56a95f309dd93959b6d77
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3bb17f04f000e7f6f9d56a95f309dd93959b6d77
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M src/linalg2.hpp

  Log Message:
  -----------
  adding helper function which sorts an Eigen::Array


  Commit: 78720e613d791b30a9905a6a28a242224303c9a4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/78720e613d791b30a9905a6a28a242224303c9a4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M src/linalg2.hpp
    M src/wrappers.hpp

  Log Message:
  -----------
  move sorting function to wrappers module


  Commit: 3c10f4b3b65d328d77f9fa846e830251de7cf04c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3c10f4b3b65d328d77f9fa846e830251de7cf04c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M meta/LoopMasses.m

  Log Message:
  -----------
  Bugfix: sort momenta used for the self-energy calculation


  Commit: b23dc2699f1d86596ba301be023986b6c1f62973
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b23dc2699f1d86596ba301be023986b6c1f62973
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting complaint


  Commit: 6aa9ca9a4ac4e5d9693e2e789f6e2ccfff4ba269
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6aa9ca9a4ac4e5d9693e2e789f6e2ccfff4ba269
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M test/test_SMSSM_tree_level_spectrum.cpp

  Log Message:
  -----------
  correcting test: Goldstone bosons are now at the front


  Commit: 798f11bb30ca1233d6da40da2d55a8032bbe8105
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/798f11bb30ca1233d6da40da2d55a8032bbe8105
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
    M test/test_benchmark.cpp

  Log Message:
  -----------
  pipe cerr output to /dev/null


  Commit: 0177ef47452d8cc5e0b09f699d904dfbfcda7a39
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0177ef47452d8cc5e0b09f699d904dfbfcda7a39
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  e.g, --> e.g.~ in introduction.


  Commit: 4b4cfce02602244a2d9a20756e5e597469cc2e8f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4b4cfce02602244a2d9a20756e5e597469cc2e8f
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  slight grammar fix in introduction.  some sentences are still too long.


  Commit: 947dc6577ba6817c4bd999613e35c8687fd26720
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/947dc6577ba6817c4bd999613e35c8687fd26720
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
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  Dominik's suggestions on sections 3-4


  Commit: 0559b4c9b5a5681cdfec9878b9e7359ed62d1d01
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
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  Log Message:
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  grammar: Note,  -->  Note


  Commit: 9551851528cb3ccc47516f584d42c389b98799a3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9551851528cb3ccc47516f584d42c389b98799a3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  note about example for a pure low-energy model


  Commit: 8ec5fe254eb8449c3011e1053cfb44c7e3f56361
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8ec5fe254eb8449c3011e1053cfb44c7e3f56361
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
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  Log Message:
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  a little language improvement


  Commit: 6cf378698ba772323bc009687fc8b419614a94da
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
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  update Program Summary


  Commit: 26876d54eb4785bff8f928ebea62bafd7610a266
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  doc/paper.tex: split command box for tower example

as Dominik suggested.


  Commit: 533db0ad1f130c2b8f18de5bec4ea7776aecfb15
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/533db0ad1f130c2b8f18de5bec4ea7776aecfb15
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  removed intance of y_b^2 y_\taui^2 since we don't inlcude these.


  Commit: 4785711e7134c3934c96f733c41e4c985219946e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4785711e7134c3934c96f733c41e4c985219946e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  the programming language used in the Mathmatica program is
called Wolfram

> Hi all,
>
> apparently, the programming language used in the Mathmatica program is
> called "Wolfram", although I am not sure how many people would recognize
> the name.  :)
>
>      http://en.wikipedia.org/wiki/Wolfram_Language
>      http://reference.wolfram.com/language
>
> Best,
> Jae-hyeon


  Commit: f1af8d45f7c3c899c2cccb33092f83a22c6e0131
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
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  typo


  Commit: de3bbe51fa94470c5d02e5951ff10e707d7bb209
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  doc/paper.tex: corrections to section "Adapting C++ code"


  Commit: f34654ecb148740a4ebc5c05b2fabdb7e51c152a
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  doc/paper.tex: highlight C++ comments except pseudo-codes


  Commit: 84ca179c15d8ad12d472f2c8b75128f46e90b620
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  Abstract with Dominik's suggestions


  Commit: 4ba416a5c21b34da7d74bf372a341101eb1cdf86
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  doc/paper.tex: differentiate between inheritance and component separation


  Commit: 2a4da508bb62dd9fcfaf6d7c126cb57d640437a5
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  doc/paper.tex: avoid redundancy

sharply ~ manifestly
divided ~ separate


  Commit: 5127c56766a6258d9e0dfd4f5a518c08cf90d537
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

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  addressing Dominik's suggestions on section 7


  Commit: d690b4f1025937e36fcccc71ee7eea1ffa017b72
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-06 (Fri, 06 Jun 2014)

  Changed paths:
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  extend conclusions


  Commit: daff389089e952098ec52e7ec223386de345b6fb
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

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  adding file with shell helper scripts


  Commit: a59af6bb3ae9eadaa0f682e1aee7030c05be7cea
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  Commit: fad7f8b17c677e3ffc8cfd24bf3f16fa54031519
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

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  doc/paper.tex: add Bourne shell as language, delete word size


  Commit: 4643298f8b468bc22315b2190c74a9b76fb87bed
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4643298f8b468bc22315b2190c74a9b76fb87bed
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

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  doc/paper.tex: change title of sec:quick-start-cmssm


  Commit: 742be2e5352bb8f30dfbded892649f411eba4742
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/742be2e5352bb8f30dfbded892649f411eba4742
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  Revert "Bugfix: sort momenta used for the self-energy calculation"

This reverts commit 3c10f4b3b65d328d77f9fa846e830251de7cf04c.


  Commit: ce3d9cbd389f9da25f91326c4180652628f24b2b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ce3d9cbd389f9da25f91326c4180652628f24b2b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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    M test/test_SMSSM_tree_level_spectrum.cpp

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  reorder the goldstone bosons separately


  Commit: 6ab5262a5bbc235be9ece4a62a1c8f902c715ff0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6ab5262a5bbc235be9ece4a62a1c8f902c715ff0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  remove debug output


  Commit: 2a17f447c3a32238ca747628bbc0c2be4096c61a
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  Log Message:
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  add and discuss model class methods for DR-bar and pole masses


  Commit: 6dab981fb86ff4e385f683301f298c824682aa29
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6dab981fb86ff4e385f683301f298c824682aa29
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

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  avoid term "out of the box"


  Commit: 3e54b05c3d4f20b640e3a1f25f5faa5fc73517d2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3e54b05c3d4f20b640e3a1f25f5faa5fc73517d2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  sort references


  Commit: 94a2084d95ab7fac4aa2f51d84683f75e8e27c66
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/94a2084d95ab7fac4aa2f51d84683f75e8e27c66
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    A model_files/E6SSMnew/FlexibleSUSY.m.in
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  Log Message:
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  added updated versions of E6SSMnew model files.


  Commit: 066cc2318267c0a4467c7f3e9249da827e491246
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/066cc2318267c0a4467c7f3e9249da827e491246
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M model_files/E6SSMnew/FlexibleSUSY.m.in

  Log Message:
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  added PotentialLSPParticles to E6SSMnew FlexibleSUSY model file.


  Commit: 37c1005f87c73023c64a08bfbc88eac0cc1b1545
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37c1005f87c73023c64a08bfbc88eac0cc1b1545
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    R model_files/E6SSMnew/FlexibleSUSY.m.in
    M sarah/E6SSM/E6SSM.m
    M sarah/E6SSM/parameters.m
    M sarah/E6SSM/particles.m
    R sarah/E6SSMnew/E6SSMnew.m
    R sarah/E6SSMnew/parameters.m
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  Log Message:
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  removed old E6SSM files and rteplaced with new ones from E6SSMnew.


  Commit: 8a0e0bbcab1c2a5ba2a360d4fdc7798e4b0d9262
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8a0e0bbcab1c2a5ba2a360d4fdc7798e4b0d9262
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  Log Message:
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  typo fix gauge-single -> gauge singlet


  Commit: 47c56e742ec34f4da7e726657fd86046ced55fc3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/47c56e742ec34f4da7e726657fd86046ced55fc3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  adding example E6SSM SLHA input file


  Commit: 27ef93f241ae3ccd6e8925217d6186dd5866e23e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/27ef93f241ae3ccd6e8925217d6186dd5866e23e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in

  Log Message:
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  reintroducing default setting for E6SSM mass eigenstates


  Commit: 51279623cad3d6dbb2ab66e534dbd08b2db57bce
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/51279623cad3d6dbb2ab66e534dbd08b2db57bce
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

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  inserted \linbreak to stop line overflow.


  Commit: 638b18a4cd82c00ad26312434232030f96d5c10b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/638b18a4cd82c00ad26312434232030f96d5c10b
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
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  Commit: e3eb0066ff0f6cda14435e87c903039d313af443
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e3eb0066ff0f6cda14435e87c903039d313af443
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
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  Log Message:
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  extended conclusions.


  Commit: bf2c5fa0bb4a3f7b6e22a17d06e62055b97eb471
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf2c5fa0bb4a3f7b6e22a17d06e62055b97eb471
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

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  doc/paper.tex: join a split command line


  Commit: 3c6bc89864e74fe45bd96c7f66ee1189c7e132a7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3c6bc89864e74fe45bd96c7f66ee1189c7e132a7
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

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  added paragraph on testing against CE6SSM.


  Commit: edd746eca5d065a6b3c6882233f7070986c5e663
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  doc/paper.tex: correct a likely typo


  Commit: 2bb50471a78c6e59700f92dd91b38340abea1043
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  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  doc/paper.tex: relate a sentence better to the preceding one


  Commit: 3531d25704a8b1972540886ad559077380730681
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3531d25704a8b1972540886ad559077380730681
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
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  removed sarah/myE6SSM from repository.


  Commit: 5b208ba1c9f9c05f8897a4f23b9f67bc2cca5dcb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5b208ba1c9f9c05f8897a4f23b9f67bc2cca5dcb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  update average run-time in the Program Summary


  Commit: 52ae6a75f296f9d5a7ebe71b11dda2db259573cd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/52ae6a75f296f9d5a7ebe71b11dda2db259573cd
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-07 (Sat, 07 Jun 2014)

  Changed paths:
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  Commit: 1663196951142098547aabdd2b05e96fd576e4c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1663196951142098547aabdd2b05e96fd576e4c8
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

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  doc/paper.tex: replace MacOS by Mac OS X

Mac OS was not Unix-like until version 9.


  Commit: f79b8aa8e161c2d50f50f1de9df0fb98797017b9
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

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  discussing problems during the iteration


  Commit: e67bf26be5bc35743f623c546544c2b72b9bf06c
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  Date:   2014-06-08 (Sun, 08 Jun 2014)

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  simplify git archive command


  Commit: 9af0af1ca579a2c50ed9c0dcbf7d9a426e7f1ff3
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

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  adding tikz-um.sty to the list of dependencies of the paper


  Commit: cbaea924610c68900148e0130a56f926d11d3446
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  Date:   2014-06-08 (Sun, 08 Jun 2014)

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  adding release-paper target to simplify the upload on arxiv


  Commit: 5f753f8feaca4bebf0707c8e13bddbff7b531eee
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  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
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  added more to acknowledgements.


  Commit: 73ebfb8a62dbb56e06bcfe20368af5d1e6b20869
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  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
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  fixed typos in last edit.


  Commit: 706393d854e08fc4135d8ece270dd01ee757a90b
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  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
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  add release-paper to list of phony targets


  Commit: adc5b13c73e0b0a72f3f6c159e2d29a9e38cfe6a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/adc5b13c73e0b0a72f3f6c159e2d29a9e38cfe6a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  adding comments to the SLHA MODSEL options


  Commit: c7bde18876c8300d47f6f3f021d0640b45a4c187
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c7bde18876c8300d47f6f3f021d0640b45a4c187
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M model_files/E6SSM/LesHouches.in.E6SSM
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM
    M model_files/UMSSM/LesHouches.in.UMSSM

  Log Message:
  -----------
  remove unupported default options from our example SLHA input files


  Commit: 18fa2dec94375b0e1aaac62bbd10acedcffbbd38
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/18fa2dec94375b0e1aaac62bbd10acedcffbbd38
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added some dsicussion of problem issues. more to follow.


  Commit: 23a18c72c1a79a5ca7a1ac757832e68c3ea1ff02
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/23a18c72c1a79a5ca7a1ac757832e68c3ea1ff02
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added stuff about E6SSM problems.  We cannot keep it in this form though.
But wnated to put it in temporarily to help explain to
Alex and Jae-hyeon.


  Commit: 2e1599fce2a3027c9461815cd2c2f4e33ea844fd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2e1599fce2a3027c9461815cd2c2f4e33ea844fd
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added reference to jae-hyeon's lattice method as a possible solution to convergence problems.


  Commit: a0bc301fd8ba63bee907ddc524c4c5bfc3ff817d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a0bc301fd8ba63bee907ddc524c4c5bfc3ff817d
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added another sentcence regarding additional solver.


  Commit: fda3cea38e15894b1e0ddd826a904445c61019a0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/fda3cea38e15894b1e0ddd826a904445c61019a0
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  spell check.


  Commit: 539fa9d14bc65bd964a4bcfe4622bfd449a543a7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/539fa9d14bc65bd964a4bcfe4622bfd449a543a7
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  removed detailed explanation of VEV problem. I think there is no way to
include this, but perhaps Jae-hyeon or Alex can suggest a cleanerf fix that
is more suitable.


  Commit: ea1f1c39da50f998e807be2fffc99b67a1231ba0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea1f1c39da50f998e807be2fffc99b67a1231ba0
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add a little Zur├╝ckhaltung


  Commit: a5e402ca23cbaad4282aa5e159e979b04b584e63
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a5e402ca23cbaad4282aa5e159e979b04b584e63
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fix two typos


  Commit: 29149a34a5a8db783934446c29714c56ec171196
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/29149a34a5a8db783934446c29714c56ec171196
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-08 (Sun, 08 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  make modifications suggested by Dominik


  Commit: 68df603f1b2ba3edb297b013a90660e92480d85a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/68df603f1b2ba3edb297b013a90660e92480d85a
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: fix typos


  Commit: 0fe0aa7353206bf3bda1129b65ee3725470c492d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0fe0aa7353206bf3bda1129b65ee3725470c492d
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: conform to -ize convention


  Commit: cd41c75b219620048c2f2c5842898e47813d8485
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cd41c75b219620048c2f2c5842898e47813d8485
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: match firstly ... secondly ...


  Commit: 6a3b2f0f91e8f942ec3844fa45eafcb19e481c2c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6a3b2f0f91e8f942ec3844fa45eafcb19e481c2c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: change capitalizations

See http://www.boost.org .


  Commit: 0cf95423400d4e80bca32045e2975ef6bf010552
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0cf95423400d4e80bca32045e2975ef6bf010552
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: trim optional trailing / from links


  Commit: 0391996686137a9e3dbdc01f406169c28f1cb407
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0391996686137a9e3dbdc01f406169c28f1cb407
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: trim optional trailing / from argument to cd


  Commit: 78971c92688f1931c4c1c550e63b6fa90bac239b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/78971c92688f1931c4c1c550e63b6fa90bac239b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: minor changes

Command line is not an output channel but an input.


  Commit: 2b3fa3d3babd09c7348eb61bd9bffeff15dde1b3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b3fa3d3babd09c7348eb61bd9bffeff15dde1b3
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  doc/paper.tex: add/correct cross-references


  Commit: c8cb1ff377b77f028a3a0f1c5e1f5fbbcd8a0d33
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c8cb1ff377b77f028a3a0f1c5e1f5fbbcd8a0d33
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added key words 'renormalization group equations' as per Jae-hyeon suggestion.


  Commit: f07664a353d3776e50eb162e6a0d790d843902ed
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f07664a353d3776e50eb162e6a0d790d843902ed
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  removed reference to FlexibleSUSY bugs in section 8 as per Jae-hyeon suggestion.


  Commit: b3708922d9ee9a3e0a31898516d84e409d0f3424
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b3708922d9ee9a3e0a31898516d84e409d0f3424
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Changed obvious instance of FlexibleSUSY.m to FlexibleSUSY.m.in.
Thinking about how to calrify distinction elsewhere.


  Commit: 17618a9e09096630c0529defab261521dbab5e4d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/17618a9e09096630c0529defab261521dbab5e4d
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added decription of how FlexibleSUSY takes FlexibleSUSY.m.in fle nad creates
FlexibleSUSY.m file to section 5. Alos changed the CMSSM file quoted
in paper to be FlexiblleSUSY.m.in file, replacing first line.


  Commit: 1861fa0e53186ac5c7c40f3347f30605c40b4637
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1861fa0e53186ac5c7c40f3347f30605c40b4637
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  FlexibleSUSY --> \fs in some places to make changing notation easier,
if we ever wish to do so.


  Commit: 607ecc523586b893e647d7a45d00d61b379ebe28
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/607ecc523586b893e647d7a45d00d61b379ebe28
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    M model_files/E6SSM/LesHouches.in.E6SSM
    R sarah/E6SSM/E6SSM.m
    R sarah/E6SSM/parameters.m
    R sarah/E6SSM/particles.m

  Log Message:
  -----------
  deleted E6SSM files then replaced with new E6SSM FlexibleSUSY file for
GUT normalised charges.


  Commit: 2ba3af9fedbe31a9c853b3026beb9290c77a5ac4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2ba3af9fedbe31a9c853b3026beb9290c77a5ac4
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A sarah/E6SSM/E6SSM_altcharges.m
    A sarah/E6SSM/parameters.m
    A sarah/E6SSM/particles.m

  Log Message:
  -----------
  added sarah/E6SSM files from GUT normalised version.


  Commit: 407aef4d79b80bfc3eda9dc78871e6292911260a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/407aef4d79b80bfc3eda9dc78871e6292911260a
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A sarah/E6SSM/E6SSM.m
    R sarah/E6SSM/E6SSM_altcharges.m

  Log Message:
  -----------
  renamed sarah/E6SSM/E6SSM.m and changed model name inside accordingly.


  Commit: 3848d5bd156a9c27f4d8f3a7bd4f6f263be5ce24
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3848d5bd156a9c27f4d8f3a7bd4f6f263be5ce24
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  intergenerational -> inter-generational


  Commit: 2ae822408068e2688ca7e4f9c2f71353955f3251
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2ae822408068e2688ca7e4f9c2f71353955f3251
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  finished full spell check.


  Commit: ec9fbcf840202cf064193d44a07d753c4a52b414
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ec9fbcf840202cf064193d44a07d753c4a52b414
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Log Message:
  -----------
  remove executable flag from model files


  Commit: 9272010f9959b17d88dc4481bf83abd9189fb518
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9272010f9959b17d88dc4481bf83abd9189fb518
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Log Message:
  -----------
  remove executable flag from MSSMNoFV model files


  Commit: a5c66161097cce79bb1443f7f89d29368c16a65a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a5c66161097cce79bb1443f7f89d29368c16a65a
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  explain meaning of vT in Eq. (15)


  Commit: a54870eecd30005379773e7b8343e80774d071d5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a54870eecd30005379773e7b8343e80774d071d5
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  clarify the three categories of model parameters

We have now the following three terms:

  "SUSY parameters" := gauge couplings, VEVs,
                 superpotential parameters,

  "soft-breaking parameters := Girardello, Grisaru terms

  "all model parameters" := SUSY parameters + soft-breaking parameters


  Commit: 8db8f01aa59e9d9de36cfc6a5d8a0b9dc3eafd73
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8db8f01aa59e9d9de36cfc6a5d8a0b9dc3eafd73
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M model_files/E6SSM/LesHouches.in.E6SSM

  Log Message:
  -----------
  remove unsupported MODSEL entries from E6SSM example SLHA input file


  Commit: d02913c846a70ad0a359e28102426ce4c74e2598
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d02913c846a70ad0a359e28102426ce4c74e2598
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M meta/WeinbergAngle.m

  Log Message:
  -----------
  adding one line of debug output to avoid "stucking"

In some models it takes long to express the Weinberg angle in terms of
the model parameters.  This message tells the user that we're still
trying hardly.


  Commit: 68d9686f1f03de03eb4da795ebdf06c820d676e7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/68d9686f1f03de03eb4da795ebdf06c820d676e7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  add missing \code{} wrapper commands


  Commit: 8f5d72453c60622ef61d29d624116383b28ecff4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8f5d72453c60622ef61d29d624116383b28ecff4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  remove \JH* macros


  Commit: aec6a864476a128abf339b5a56c1aac5414bb4f2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/aec6a864476a128abf339b5a56c1aac5414bb4f2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M model_files/E6SSM/FlexibleSUSY.m.in
    M sarah/E6SSM/E6SSM.m
    M sarah/E6SSM/parameters.m

  Log Message:
  -----------
  Merge remote-tracking branch 'organization/E6SSM-GUT-norm-charges' into development


  Commit: b303298128fe3f858d451f4d88cc514d3c7b1e93
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b303298128fe3f858d451f4d88cc514d3c7b1e93
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  FS is a "Mathematica and C++ package"


  Commit: dbc83651516dd5159d5d3dedba3d80b239b9cdb9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dbc83651516dd5159d5d3dedba3d80b239b9cdb9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  correcting citations for the two-loop tadpoles in the MSSM and NMSSM


  Commit: bec45353c001e893db675f8950594708529c4816
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bec45353c001e893db675f8950594708529c4816
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Log Message:
  -----------
  Strip executable permission from model files


  Commit: 810e60175fec6ba6788ae9aa755d97e4749d3194
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/810e60175fec6ba6788ae9aa755d97e4749d3194
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  explain superscript T and mention SLHA-2 convention


  Commit: 8c7904a4a8307f5afde63f58a03126e3159d5f31
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8c7904a4a8307f5afde63f58a03126e3159d5f31
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M README
    A config/references
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  adding references to publication on arXiv with temporary arXiv number


  Commit: 87ab7b49684b54df851f2622236e9337e38f6e03
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/87ab7b49684b54df851f2622236e9337e38f6e03
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  explain creation of model files and directories in a (hopefully) clearer way


  Commit: 73796f40a5ae39ee6199697dcfb6190bcbd4701d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/73796f40a5ae39ee6199697dcfb6190bcbd4701d
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  added extra references, so we refer to standard papers for the models.


  Commit: 7faef7daaa89979a47b8d3e08a082e95026a2192
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7faef7daaa89979a47b8d3e08a082e95026a2192
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  Removed names from testin g sevction and mention instead user testing
modified acknowledgements slightly to reflect content taken out of
testing section.


  Commit: 376157a90a1b945a846885f1a70b62bd8ede84d7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/376157a90a1b945a846885f1a70b62bd8ede84d7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fix typos


  Commit: 0e58396adadcaa0606a81e580682d992f1ee3a8b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0e58396adadcaa0606a81e580682d992f1ee3a8b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  fix another typo


  Commit: 4f064c6d46e3f8b207b178e432563bb88bbc0664
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4f064c6d46e3f8b207b178e432563bb88bbc0664
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
  -----------
  typo


  Commit: c2143bb35eb816632fb5b9f91a003b2ea9c72312
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c2143bb35eb816632fb5b9f91a003b2ea9c72312
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  stick to -ize convention


  Commit: 897b09c8904e9899cadeca2e625b0ce9a0ef6d2f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/897b09c8904e9899cadeca2e625b0ce9a0ef6d2f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/paper.tex

  Log Message:
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  doc/paper.tex: stress separation of physics from iteration procedure


  Commit: 3b7f8e7eae232b4af656c33c0780b2240c7e5017
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3b7f8e7eae232b4af656c33c0780b2240c7e5017
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    A doc/flexiblesusy-paper.tex
    M doc/module.mk
    R doc/paper.tex

  Log Message:
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  rename paper TeX file


  Commit: 584f18fc170e624d2bd0c16273de1f01880ea812
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/584f18fc170e624d2bd0c16273de1f01880ea812
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
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  do not pack tikz-uml.sty together with the paper TeX file

However, if arXiv demands it, I'll re-add it.


  Commit: d3ba9046b6fa3eebc55a5cb2003c6c2354cbfec7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d3ba9046b6fa3eebc55a5cb2003c6c2354cbfec7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/module.mk

  Log Message:
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  Revert "do not pack tikz-uml.sty together with the paper TeX file"

This reverts commit 584f18fc170e624d2bd0c16273de1f01880ea812.

Arxiv does not have tikz-uml.sty


  Commit: 76deb36961e038c8748345b66c7377eb7341ce4e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/76deb36961e038c8748345b66c7377eb7341ce4e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
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  Add report numbers and acknowledgement


  Commit: 0caf9c5e1c0b1fc0e517874d03a07f340571dea9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0caf9c5e1c0b1fc0e517874d03a07f340571dea9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  Intel Xeon has 2 CPUs with 6 cores each


  Commit: e3543dc831f08181ee4cacdb66fa61268d47b3db
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e3543dc831f08181ee4cacdb66fa61268d47b3db
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
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  fix long line


  Commit: b6e240f035054ce92f389fd529ce46539dd887fc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b6e240f035054ce92f389fd529ce46539dd887fc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  correcting the intel Xeon machine type again

The machine has 2 CPUs of type Intel Xeon.
Each Xeon CPU has 6 physical cores.


  Commit: 8041e528aafed0830152c6f9f3837ec09dcf7a1d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8041e528aafed0830152c6f9f3837ec09dcf7a1d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-09 (Mon, 09 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  remove double References section title for arXiv


  Commit: 685c5d96f1c14388d227ac114d8893a81fa7fa85
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/685c5d96f1c14388d227ac114d8893a81fa7fa85
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M ChangeLog
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  Log Message:
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  version 1.0.0


  Commit: 956200c7933177c5440ecea27167611d58a6b1da
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/956200c7933177c5440ecea27167611d58a6b1da
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M doc/release

  Log Message:
  -----------
  release procedure note: ChangeLog must be updated as well


  Commit: 4dc897e1a0a497d0a5a0c65321689529c06c7727
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4dc897e1a0a497d0a5a0c65321689529c06c7727
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M src/module.mk

  Log Message:
  -----------
  Bugfix: do not install non-exported header file


  Commit: 246ddf4f88fa62e4f218d1e58222fd1e92304e41
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/246ddf4f88fa62e4f218d1e58222fd1e92304e41
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 608a6b00e48ccfa0da01ee41aabce233a83c96e2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/608a6b00e48ccfa0da01ee41aabce233a83c96e2
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  adding release-head target to distribute the current HEAD


  Commit: 20a5c262c54774bf40268d6b5809211b6313e0ce
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/20a5c262c54774bf40268d6b5809211b6313e0ce
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  added slha input file to run example in README file.
Since we removed the default point running without would give an error.


  Commit: ae3831cfcce9b1f6beae13a33db05b76f025cf00
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ae3831cfcce9b1f6beae13a33db05b76f025cf00
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-10 (Tue, 10 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  added slha input file to run example for plotting example in README file.


  Commit: dbc37fc9814ebe3ebaf19fafe3f87d85ec1eae46
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dbc37fc9814ebe3ebaf19fafe3f87d85ec1eae46
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-11 (Wed, 11 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  Added warning for user that the rgflow plot doesn't make sense and
state that they can adapt file to plot a subset of these parameters.


  Commit: 342605c7a6aa5e9eb02ec9fe549b5029bb216094
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/342605c7a6aa5e9eb02ec9fe549b5029bb216094
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-11 (Wed, 11 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  typo in last edit he --> the


  Commit: d82cb293d20c39085f672fee2524d02e112163a9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d82cb293d20c39085f672fee2524d02e112163a9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-11 (Wed, 11 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  add newline to end of file


  Commit: 3cfc52fb1e76de802acc3d585d81f8ed4d397445
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3cfc52fb1e76de802acc3d585d81f8ed4d397445
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-11 (Wed, 11 Jun 2014)

  Changed paths:
    M README
    M config/references

  Log Message:
  -----------
  update arxiv number 1406:2319 [hep-ph]


  Commit: 0b3680acb22648bdd7a698b4489d520a4db036c5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0b3680acb22648bdd7a698b4489d520a4db036c5
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-11 (Wed, 11 Jun 2014)

  Changed paths:
    M ChangeLog
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  Log Message:
  -----------
  version 1.0.1


  Commit: 2b91384cd56530bdb4339ca7e545f71304f0d256
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2b91384cd56530bdb4339ca7e545f71304f0d256
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-11 (Wed, 11 Jun 2014)

  Changed paths:
    M createmodel

  Log Message:
  -----------
  createmodel: show an existing model file directory in usage


  Commit: e56fb97b9f446efc03ad2f3be397b2cc43560916
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e56fb97b9f446efc03ad2f3be397b2cc43560916
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-11 (Wed, 11 Jun 2014)

  Changed paths:
    M createmodel
    M templates/module.mk.in

  Log Message:
  -----------
  createmodel: copy files LesHouches.in* if found in model file directory

They are installed by make install-src.


  Commit: 81e56d08b5f5e6cf8f67740a1b4edcd3b122aa72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/81e56d08b5f5e6cf8f67740a1b4edcd3b122aa72
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  added adelade pre-print number to paper.


  Commit: c42a68bfb925d6b5995f15e43722c53841a37780
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c42a68bfb925d6b5995f15e43722c53841a37780
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  changed some of the commands using LesHouches files to refelct Jae-hyeon's update.
I didn't change all references to this though as the leshoucesh files inside
model_files/<model> directory are still there.
Not sure what is optimal way to describe in paper.


  Commit: e2f2d7862bed779940075ff01c64a45ae2f7ebe5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e2f2d7862bed779940075ff01c64a45ae2f7ebe5
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    A doc/flexiblesusy-paper.pdf
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  added reference from Moritz McGarrie to USSM list.  may not be entirtely appropriate.


  Commit: 6c3fe088b310d065ed4af847c69c8cb1ed1a1a4e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6c3fe088b310d065ed4af847c69c8cb1ed1a1a4e
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    R doc/flexiblesusy-paper.pdf

  Log Message:
  -----------
  removed pdf added by mistake.


  Commit: 4365a6756d42905da3852f870fdaf0189b89113e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4365a6756d42905da3852f870fdaf0189b89113e
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    A doc/flexiblesusy-paper.pdf
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  added more references to non-decoupled D-term approach, citing the kaplan paper.
and Anibal Medina's paper.  there are probably many more.


  Commit: cc2bdc438aa7c185f59c2f9f2607195e46169001
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cc2bdc438aa7c185f59c2f9f2607195e46169001
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    R doc/flexiblesusy-paper.pdf

  Log Message:
  -----------
  removed pdf because it added again by mistake. doh


  Commit: a949efca47da8074fbd72afa78d586b43eb7b3c3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a949efca47da8074fbd72afa78d586b43eb7b3c3
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  fixed order of refs I just added.


  Commit: 91547ce73a2e5c3ff3e9c2da439be33bcdca0fac
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/91547ce73a2e5c3ff3e9c2da439be33bcdca0fac
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  added Gregor Hellwig and Gambit to acknowledgements.


  Commit: d332cca545ba14733a17f94b94f6adc343cff6b2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d332cca545ba14733a17f94b94f6adc343cff6b2
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    M createmodel

  Log Message:
  -----------
  createmodel: simplify code to copy SLHA input files


  Commit: 7eae3724fb353233ceba86e5dd2f04cb3aeae12c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7eae3724fb353233ceba86e5dd2f04cb3aeae12c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: 5765eed05dfa756c95f4db06f9f2fd0765a73871
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5765eed05dfa756c95f4db06f9f2fd0765a73871
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-06-12 (Thu, 12 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  Adapt paper further to installation of LesHouches files


  Commit: 0558ac9b566bd8b431e05159604d3c2f40578b60
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0558ac9b566bd8b431e05159604d3c2f40578b60
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-13 (Fri, 13 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  added s few of Roman's E6 custodial symmetry papers to manual,
since that is a really nice alternative formulation of the E6SSM and
can ~fit with our model files since we neglect many couplings.


  Commit: 094a4c357d5c6faa4f6657d6df828ef5afc787c7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/094a4c357d5c6faa4f6657d6df828ef5afc787c7
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-14 (Sat, 14 Jun 2014)

  Changed paths:
    A doc/FlexibleFuture.txt

  Log Message:
  -----------
  added FlexibleFuture.txt to doc directory.  Contains updated list of (possible)
future extensions, collaborations, fixes, applications.
Added for others to extend  if they have ideas before we discuss this
after the dust has settled on first FlexibleSUISYDproject.


  Commit: 5f5fd2074eaed702e0a180b37c445b1d16875766
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5f5fd2074eaed702e0a180b37c445b1d16875766
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-14 (Sat, 14 Jun 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  fix typo


  Commit: 155fee75e4c2bdc20b7d52c6ce8d89986711c744
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/155fee75e4c2bdc20b7d52c6ce8d89986711c744
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-16 (Mon, 16 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  updated pulication info for nmssm-softsusy.


  Commit: 2bb71723c336a85f06917ca9365215c7fd33eab9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2bb71723c336a85f06917ca9365215c7fd33eab9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-16 (Mon, 16 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  update FS version number in download instructions to 1.0.1

Version 1.0.1 fixes a `make install-src' bug.


  Commit: 1908e17b68002b649fe170085eaddc047c698a64
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1908e17b68002b649fe170085eaddc047c698a64
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M src/slha_io.cpp
    M src/slha_io.hpp

  Log Message:
  -----------
  return the scale (if available) from read_block()


  Commit: 34fc4bce5826b6b3587c0bca0bb20fa3aadf75d0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/34fc4bce5826b6b3587c0bca0bb20fa3aadf75d0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M src/slha_io.cpp
    M src/slha_io.hpp

  Log Message:
  -----------
  adding helper function which checks if a block exists


  Commit: 784b33ecd0eae88e2ca0fdb3532d2cacb2be7984
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/784b33ecd0eae88e2ca0fdb3532d2cacb2be7984
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M src/slha_io.cpp
    M src/slha_io.hpp

  Log Message:
  -----------
  adding helper function which reads the scale from a block


  Commit: d92c2ac4d996780b4095d0e825f8547309caa391
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d92c2ac4d996780b4095d0e825f8547309caa391
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  chenged the move_goldstone_to routine to a shuffle rather than a swap.
thus preserving mass ordering amongst physical states.


  Commit: 5b52cbe81ac7e3c6e60950ef23ec0386f406ec61
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5b52cbe81ac7e3c6e60950ef23ec0386f406ec61
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M meta/WriteOut.m
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  first attempt to read the scale from the SLHA output blocks

Not complete yet.


  Commit: f485213b7afbbd9945786cb9327721c22924868c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f485213b7afbbd9945786cb9327721c22924868c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M test/test_MSSM_slha_input.cpp

  Log Message:
  -----------
  add test for the scale reading


  Commit: 011b74b8ac4cab6e26059beba26eb14cb1e09165
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/011b74b8ac4cab6e26059beba26eb14cb1e09165
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  chenged the move_goldstone_to routine to a shuffle rather than a swap.
thus preserving mass ordering amongst physical states.


  Commit: c4cbf9c86fc7ada287abdac408560a279941e99a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c4cbf9c86fc7ada287abdac408560a279941e99a
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M meta/WriteOut.m
    M src/slha_io.cpp
    M src/slha_io.hpp
    M templates/slha_io.hpp.in
    M test/test_MSSM_slha_input.cpp

  Log Message:
  -----------
  Merge branch 'development' into fix-goldstone-reorder


  Commit: acb598d2dfa94c6c3f168ff396929e498e5f5c4a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/acb598d2dfa94c6c3f168ff396929e498e5f5c4a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M src/wrappers.hpp
    M test/test_goldstones.cpp

  Log Message:
  -----------
  refactor move_goldstone_to


  Commit: 2843de83cb91e8e2795463062581c134fc1f04f6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2843de83cb91e8e2795463062581c134fc1f04f6
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M src/wrappers.hpp
    M test/test_goldstones.cpp

  Log Message:
  -----------
  resolved conflict.


  Commit: 8b7d756e6e8e6dc707ed83d74e5529a6f666ed44
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8b7d756e6e8e6dc707ed83d74e5529a6f666ed44
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  attempt to fix bug in calculate_spectrum. currently if loop_order for
pole masses is zero then the DRbar masses are copied to pole masses *before*
they are reordered.  in this fix the reordering comes first.


  Commit: c0717a7a6e96ccd25d28de1bc07caad91dc5f6d4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c0717a7a6e96ccd25d28de1bc07caad91dc5f6d4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-20 (Fri, 20 Jun 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  merge two if statements


  Commit: ebbfb88d6b661e35602940bf0402a593d110326e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ebbfb88d6b661e35602940bf0402a593d110326e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-23 (Mon, 23 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  recommend to set 2-loop switches to True in any MSSM- and NMSSM- like model


  Commit: 212f9eb9f97afb073824114ad724cb56f9539baf
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/212f9eb9f97afb073824114ad724cb56f9539baf
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-23 (Mon, 23 Jun 2014)

  Changed paths:
    M meta/SelfEnergies.m
    M meta/TreeMasses.m
    M test/test_sfermions.cpp

  Log Message:
  -----------
  correcting naming of 3rd gen. sfermion mass calculation functions


  Commit: f718b6417aa2a0ea8d7569754809625de490b62d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f718b6417aa2a0ea8d7569754809625de490b62d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-23 (Mon, 23 Jun 2014)

  Changed paths:
    M .gitattributes

  Log Message:
  -----------
  do not distribute doc/FlexibleFuture.txt


  Commit: 37d0f4ac5dbe3f74f5c80875477d44fbdc1ce9a8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/37d0f4ac5dbe3f74f5c80875477d44fbdc1ce9a8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-23 (Mon, 23 Jun 2014)

  Changed paths:
    M src/build_info.cpp

  Log Message:
  -----------
  adding missing line break


  Commit: 2677f79c842ef3de3ffcfb56190a847adbae7d0f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2677f79c842ef3de3ffcfb56190a847adbae7d0f
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-23 (Mon, 23 Jun 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  version 1.0.1-cpc1

Version submitted to CPC.


  Commit: f4f5c89fbbfdccee93b16e243cd80b086b8dbb5b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f4f5c89fbbfdccee93b16e243cd80b086b8dbb5b
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  added two more posssible minor extensions to FlexibleFuture.txt.


  Commit: 81e1af6a4b365b26b33fecf3b9e3d6dbcae323c3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/81e1af6a4b365b26b33fecf3b9e3d6dbcae323c3
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  minor edit to last change.


  Commit: 2f2806e3b4958f35f6f5f9d69b815e5271165752
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2f2806e3b4958f35f6f5f9d69b815e5271165752
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  another minor edit.


  Commit: 536c469b7ea64cdee9efae29c1d5b803e8e13e1a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/536c469b7ea64cdee9efae29c1d5b803e8e13e1a
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  added one more minor possible extension to list.


  Commit: a2fc6683087504489b37b6c39118851cac931beb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a2fc6683087504489b37b6c39118851cac931beb
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M test/stopwatch.cpp

  Log Message:
  -----------
  decrease minimum duration to micro seconds

This allows measurements of very fast functions


  Commit: c0bc652fcfd735472b94b26693c42d9d1ce529b1
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c0bc652fcfd735472b94b26693c42d9d1ce529b1
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  Merge branch 'development' of github.com:FlexibleSUSY/FlexibleSUSY into development


  Commit: d0b292fd42c33716b1b63b848c1c564e0e3fac38
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d0b292fd42c33716b1b63b848c1c564e0e3fac38
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M test/module.mk
    M test/test_wrappers.cpp

  Log Message:
  -----------
  add test to measure execution time of ToString implementations


  Commit: 0098cca6af5b92cc40f8708b0f40d3668c2ec449
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0098cca6af5b92cc40f8708b0f40d3668c2ec449
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M test/test_wrappers.cpp

  Log Message:
  -----------
  testing boost::lexical_cast as well


  Commit: e238dc01ab001605d8d235c57acecb3c3555d341
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e238dc01ab001605d8d235c57acecb3c3555d341
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M src/wrappers.hpp

  Log Message:
  -----------
  faster ToString implementation


  Commit: e87328c63d81f731fcd4e164efcad5cc81a1bb28
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e87328c63d81f731fcd4e164efcad5cc81a1bb28
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M doc/flexiblesusy-paper.tex

  Log Message:
  -----------
  mark corresponding author for CPC


  Commit: 23414054a5d5ead18e4c324eb195b0dda5eb64f9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/23414054a5d5ead18e4c324eb195b0dda5eb64f9
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-24 (Tue, 24 Jun 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  update CPC submission version 1.0.1-cpc2


  Commit: 2550508f1dbddb94f0dc044127c4e49159915642
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/2550508f1dbddb94f0dc044127c4e49159915642
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-25 (Wed, 25 Jun 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  read scales from all DR-bar parameter blocks


  Commit: e2201feb5272ca4be3865528f60df5ef75c8a163
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e2201feb5272ca4be3865528f60df5ef75c8a163
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-25 (Wed, 25 Jun 2014)

  Changed paths:
    M templates/slha_io.cpp.in

  Log Message:
  -----------
  warn in case of DR-bar blocks at different scales


  Commit: 757d1b36ca889b5eaca9c2f49099f63cb75b3d94
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/757d1b36ca889b5eaca9c2f49099f63cb75b3d94
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-25 (Wed, 25 Jun 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  adding setter and non-const getter for the physical struct


  Commit: 934afc95b6933df3d0e19b4216e30abed7b6319e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/934afc95b6933df3d0e19b4216e30abed7b6319e
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-25 (Wed, 25 Jun 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  read physical mixing matrices from SLHA file


  Commit: 33cf713eec1d63277303ae17e54df16589e4ff9c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/33cf713eec1d63277303ae17e54df16589e4ff9c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-25 (Wed, 25 Jun 2014)

  Changed paths:
    M meta/WriteOut.m
    M templates/slha_io.hpp.in
    M test/test_MSSM_slha_input.cpp

  Log Message:
  -----------
  read pole masses and mixing matrices from SLHA file


  Commit: 6377b61cd0d25fbe07fb9bc7f4354206b5070c1d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6377b61cd0d25fbe07fb9bc7f4354206b5070c1d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-26 (Thu, 26 Jun 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  Bugfix: always compare against vector boson DR-bar mass

Reason: We do not always calculate the vector boson pole mass.  Only
if do_calculate_sm_pole_masses == true.


  Commit: b8015b34f4807a7be9c031ce4c692545f061f68c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b8015b34f4807a7be9c031ce4c692545f061f68c
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-26 (Thu, 26 Jun 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  fixed typos.


  Commit: ac89b929bed816e7d68bf271cce8d549ef883443
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ac89b929bed816e7d68bf271cce8d549ef883443
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-28 (Sat, 28 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  adding brief SARAH installation guide


  Commit: 5899af08a1bcc3098920f26d7ba8dc3c35432f3d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5899af08a1bcc3098920f26d7ba8dc3c35432f3d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-29 (Sun, 29 Jun 2014)

  Changed paths:
    A install-sarah

  Log Message:
  -----------
  adding SARAH installation script


  Commit: 7237c69f2f726bc13d90a4ced3f375b92cd56f46
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7237c69f2f726bc13d90a4ced3f375b92cd56f46
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-29 (Sun, 29 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  mention SARAH installation script in the README


  Commit: 555a7167257e3bd69d759abe7f7129d339da9a72
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/555a7167257e3bd69d759abe7f7129d339da9a72
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-29 (Sun, 29 Jun 2014)

  Changed paths:
    M .gitignore

  Log Message:
  -----------
  correcting name of paper in the .gitignore file


  Commit: 28720ebc3be8dca63c72bdc50b3a1c177421754c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/28720ebc3be8dca63c72bdc50b3a1c177421754c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-29 (Sun, 29 Jun 2014)

  Changed paths:
    M install-sarah

  Log Message:
  -----------
  check for SARAH installation and quit if already installed


  Commit: b69e4393be0438bfddc9eb8a6c4dbf65bcf1c154
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/b69e4393be0438bfddc9eb8a6c4dbf65bcf1c154
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-30 (Mon, 30 Jun 2014)

  Changed paths:
    M README

  Log Message:
  -----------
  describe commands to generate the HTML documentation

This addresses CPC-Referee's comment 1.


  Commit: bdc8f0f576c224ef9ec3960a996b145d09310f7b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bdc8f0f576c224ef9ec3960a996b145d09310f7b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-30 (Mon, 30 Jun 2014)

  Changed paths:
    M install-sarah

  Log Message:
  -----------
  point user to the url where the available SARAH versions are listed


  Commit: c7b6056563134f575df614ce3a4aa23aaa967794
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c7b6056563134f575df614ce3a4aa23aaa967794
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-06-30 (Mon, 30 Jun 2014)

  Changed paths:
    M install-sarah

  Log Message:
  -----------
  sanity check for the SARAH version number


  Commit: 51c9abc82e8081ba81bf379c667a54fe11afb161
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/51c9abc82e8081ba81bf379c667a54fe11afb161
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-30 (Mon, 30 Jun 2014)

  Changed paths:
    M src/scan.cpp
    M src/scan.hpp

  Log Message:
  -----------
  document scan.{hpp,cpp}


  Commit: 134f266f721107f6cc71dd07151ca94e1ff8e0ee
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/134f266f721107f6cc71dd07151ca94e1ff8e0ee
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-06-30 (Mon, 30 Jun 2014)

  Changed paths:
    M src/two_scale_solver.cpp
    M src/two_scale_solver.hpp

  Log Message:
  -----------
  add more documentation to the two-scale solver class RGFlow<Two_scale>


  Commit: 7d0c7cac381939b757111d35652bb25ac8b83893
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7d0c7cac381939b757111d35652bb25ac8b83893
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-30 (Mon, 30 Jun 2014)

  Changed paths:
    M src/betafunction.cpp
    M src/betafunction.hpp

  Log Message:
  -----------
  added comments to Beta_function class.


  Commit: 10c3386c18c9b6d72fede0bc08350983c91c170a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/10c3386c18c9b6d72fede0bc08350983c91c170a
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-06-30 (Mon, 30 Jun 2014)

  Changed paths:
    M src/two_scale_solver.cpp
    M src/two_scale_solver.hpp

  Log Message:
  -----------
  Merge branch 'development' of https://github.com/FlexibleSUSY/FlexibleSUSY into development


  Commit: f19a8813fc0e7373ad3b002500d6c767cf2350dd
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f19a8813fc0e7373ad3b002500d6c767cf2350dd
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M src/sfermions.cpp
    M src/sfermions.hpp

  Log Message:
  -----------
  added comments to sfermions.cpp and sfermions.hpp.


  Commit: e0b050b9d5310e5066b83f85787b64caebb813a6
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e0b050b9d5310e5066b83f85787b64caebb813a6
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M src/betafunction.cpp

  Log Message:
  -----------
  small edit to commet in betafunction.cpp that was missed out when commited.


  Commit: e7d7fcc3b1f3c3ad45c146fb652e4efb0f7099d4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e7d7fcc3b1f3c3ad45c146fb652e4efb0f7099d4
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M src/betafunction.hpp
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  added comments totwo_scale_models templates and small fix to betafunction comments.


  Commit: a0a4169bc95cb720e97b9f5885036b9bc07799c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a0a4169bc95cb720e97b9f5885036b9bc07799c8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M templates/two_scale_model.cpp.in

  Log Message:
  -----------
  list all GSL root solvers that are used (do not hard-code them)


  Commit: 141b7862bdb5c878264588a885e4b538f6b35d27
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/141b7862bdb5c878264588a885e4b538f6b35d27
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M doc/Doxyfile
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser.hpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.hpp.in

  Log Message:
  -----------
  add documentation for initial guesser classes


  Commit: 21f6f345cf3443da3ef21aeec213f4d5bdff0e84
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/21f6f345cf3443da3ef21aeec213f4d5bdff0e84
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in

  Log Message:
  -----------
  more documentation for the model class


  Commit: 689141da5a939b6f3144bb6a58fac9cdff0a143c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/689141da5a939b6f3144bb6a58fac9cdff0a143c
  Author: Alexander Voigt <Alexander.Voigt at physik.tu-dresden.de>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M meta/AnomalousDimension.m
    M meta/BetaFunction.m

  Log Message:
  -----------
  call CreateUnitMatrix[] only when needed

Reason: CreateUnitMatrix[] might return an error for some types.


  Commit: 17bcf771380d9715875e96e21ee1e0ea1466a5dc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/17bcf771380d9715875e96e21ee1e0ea1466a5dc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-01 (Tue, 01 Jul 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  version 1.0.1-cpc3


  Commit: cb1ed6db51a126e74292e9cf72b3358e83fd30c8
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/cb1ed6db51a126e74292e9cf72b3358e83fd30c8
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-02 (Wed, 02 Jul 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: dff0861356c9d58c09aa6b3b12be02aa4f718faa
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/dff0861356c9d58c09aa6b3b12be02aa4f718faa
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-02 (Wed, 02 Jul 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  typo


  Commit: 50dac9f002d3ce5186f03de9624aafed9c39f295
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/50dac9f002d3ce5186f03de9624aafed9c39f295
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-02 (Wed, 02 Jul 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  version 1.0.1-cpc4


  Commit: eee8bbb27c07be0016e189c178374f93652e6ce9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/eee8bbb27c07be0016e189c178374f93652e6ce9
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-07-07 (Mon, 07 Jul 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  added Dominik's suggestions to list in FlexibleFuture.txt.


  Commit: 451f95afaa370a55e7cfbc0ef26871cc7c0696e9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/451f95afaa370a55e7cfbc0ef26871cc7c0696e9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-07 (Mon, 07 Jul 2014)

  Changed paths:
    M config/Makefile.in
    M doc/module.mk

  Log Message:
  -----------
  install README file and add it to the documentation


  Commit: 9d14b4501dad2ea2ed84d61e056c849200f7de54
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9d14b4501dad2ea2ed84d61e056c849200f7de54
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-07 (Mon, 07 Jul 2014)

  Changed paths:
    M config/Makefile.in

  Log Message:
  -----------
  put path to configure script into a separate variable


  Commit: 6b6ce3e29763cda0e5b8ec702579ebd587ba7d61
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6b6ce3e29763cda0e5b8ec702579ebd587ba7d61
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-07 (Mon, 07 Jul 2014)

  Changed paths:
    M doc/mainpage.dox.in

  Log Message:
  -----------
  extend doxygen main page


  Commit: 4c462e0de09272f305417b973a61e8c2d5ba2ff5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4c462e0de09272f305417b973a61e8c2d5ba2ff5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-07 (Mon, 07 Jul 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/Vertices.m

  Log Message:
  -----------
  Work around Part::partw caused by fields with an extra index in Cp[]

Subject: Re: SARAH Part::partw warnings from Vertex[] with E6SSM model file
Date: Thu, 12 Jun 2014 13:57:21 +0200

Hi Florian,

calling

  Vertex[{conj[USHp0[{gO1}]], bar[Cha[{gI1}]], ChaP}]

works fine, thanks!  So, the problem is than that the self-energy
contains a coupling of the form

  Cp[conj[USHp0[{gO1}]], bar[Cha[{gI1}]], ChaP[{1}]]

where ChaP appears with an index.  Maybe we should simply replace

  ChaP[{1}]   --->   ChaP

in such cases.  Anyway, many thanks for your help!

Best,
Alex

On 06/12/2014 01:23 PM, Florian Staub wrote:
> Hi,
>
> ok, sorry for the confusion. I think the problem is an even a simpler one:
>
> Vertex[{conj[USHp0[{gO1}]], bar[Cha[{gI1}]], ChaP[{idx}]}]
>
> ChaP is not supposed to carry any index. Does
>
> Vertex[{conj[USHp0[{gO1}]], bar[Cha[{gI1}]], ChaP}]
>
> work?
>
> Cheers,
> Florian


  Commit: 9ece36174948e9f24a2c31ccb502a9787c093cc5
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9ece36174948e9f24a2c31ccb502a9787c093cc5
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-08 (Tue, 08 Jul 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: 707534b4e6672f0127c4bedf2084b3ccdf99c4be
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/707534b4e6672f0127c4bedf2084b3ccdf99c4be
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-09 (Wed, 09 Jul 2014)

  Changed paths:
    M ChangeLog
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  FlexibleFuture.txt: add a possible treatment of an intermediate tachyonic mass^2


  Commit: ca1c083e5a9a981ae7fe74f906746bdf03260391
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ca1c083e5a9a981ae7fe74f906746bdf03260391
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-07-10 (Thu, 10 Jul 2014)

  Changed paths:
    M doc/FlexibleFuture.txt

  Log Message:
  -----------
  two more possible improvements added.


  Commit: c796e40fc26298958567d33a0d04f8297d6e6052
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c796e40fc26298958567d33a0d04f8297d6e6052
  Author: Peter Athron <peter.athron at adelaide.edu.au>
  Date:   2014-07-10 (Thu, 10 Jul 2014)

  Changed paths:
    M ChangeLog
    M config/Makefile.in
    M doc/FlexibleFuture.txt
    M doc/mainpage.dox.in
    M doc/module.mk
    M meta/FlexibleSUSY.m
    M meta/Vertices.m

  Log Message:
  -----------
  Merge branch 'development' of https://github.com/FlexibleSUSY/FlexibleSUSY into development


  Commit: e261b5a7cd4030635d6a8093c376f350822435e9
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e261b5a7cd4030635d6a8093c376f350822435e9
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-10 (Thu, 10 Jul 2014)

  Changed paths:
    M src/gsl_utils.cpp

  Log Message:
  -----------
  adding documentation to GSL utils module


  Commit: 87fb965443abe2d18f4136975d438e5acf74031b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/87fb965443abe2d18f4136975d438e5acf74031b
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-10 (Thu, 10 Jul 2014)

  Changed paths:
    M config/config.h.in

  Log Message:
  -----------
  consistent indentation


  Commit: a2d50ee342b64b1f39a535bfa43a129a6a75f308
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a2d50ee342b64b1f39a535bfa43a129a6a75f308
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-10 (Thu, 10 Jul 2014)

  Changed paths:
    M config/config.h.in
    M configure

  Log Message:
  -----------
  adding more configure information to config.h


  Commit: a988929802cd29bc4b01bf0702c81772e8453c7c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a988929802cd29bc4b01bf0702c81772e8453c7c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-10 (Thu, 10 Jul 2014)

  Changed paths:
    M src/build_info.cpp

  Log Message:
  -----------
  add more build information to the output


  Commit: bf8fd755f8697f4d5e379159cb0e154f4b6acb8f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/bf8fd755f8697f4d5e379159cb0e154f4b6acb8f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-11 (Fri, 11 Jul 2014)

  Changed paths:
    M src/sum.hpp

  Log Message:
  -----------
  src/sum.hpp: add looping sum

Rename loop-unrolling sum to usum.


  Commit: 9da56b510f9c7409bb8e2a5dc5545456583a3565
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9da56b510f9c7409bb8e2a5dc5545456583a3565
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-11 (Fri, 11 Jul 2014)

  Changed paths:
    M test/test_sum.cpp

  Log Message:
  -----------
  test/test_sum.cpp: test looping sum


  Commit: 252b486ec26b4e817bafbbdf60d268899a1439fc
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/252b486ec26b4e817bafbbdf60d268899a1439fc
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-13 (Sun, 13 Jul 2014)

  Changed paths:
    M install-sarah

  Log Message:
  -----------
  add usage example to the SARAH installation script help message

It illustrates the installed SARAH directories and links. I find this
very useful, since the SARAH installation is a bit tricky.


  Commit: d0e9cdba4e947f6a17a81f0dcd883aa572951f6d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d0e9cdba4e947f6a17a81f0dcd883aa572951f6d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/spectrum_generator.hpp.in

  Log Message:
  -----------
  Bugfix: set low-energy data in the low-energy constraint.

This bug affects only the SMINPUTS parameters set in the SLHA input
file.  These SM input parameters were not used correctly in the
low-energy constraint.


  Commit: 9f88deb58cbfdabb1b88db11e9e8ef1d39b188ab
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9f88deb58cbfdabb1b88db11e9e8ef1d39b188ab
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 361384bfc347ec59f32e426e90c45b2c646001d7
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/361384bfc347ec59f32e426e90c45b2c646001d7
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M meta/FlexibleSUSY.m

  Log Message:
  -----------
  initialize signs to 1, instead of 0


  Commit: 6a2fa80198f1f8b845c61aebe781a9f425944063
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6a2fa80198f1f8b845c61aebe781a9f425944063
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M model_files/NMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  make sign(vS) configurable via the SLHA input file


  Commit: beaaca392179b2550fda936789dc9cfabf09e70d
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/beaaca392179b2550fda936789dc9cfabf09e70d
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M meta/WriteOut.m
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in

  Log Message:
  -----------
  introduce SLHA convention conversion function


  Commit: 200a90760bb2e43b90f3893e138f382a78c990f0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/200a90760bb2e43b90f3893e138f382a78c990f0
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M configure

  Log Message:
  -----------
  configure: look for libboost_unit_test_framework-mt

as well as libboost_unit_test_framework.


  Commit: e1095bd687b18073d2950bc3a14b70dbece9192f
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e1095bd687b18073d2950bc3a14b70dbece9192f
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M test/test_benchmark.cpp
    M test/test_slha_io.cpp
    M test/test_wrappers.cpp

  Log Message:
  -----------
  Work around missing std::to_string on Cygwin

http://stackoverflow.com/questions/22571838/gcc-4-8-1-stdto-string-error


  Commit: 8078cab85cc775edf498640903813bdac3486679
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/8078cab85cc775edf498640903813bdac3486679
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M config/Makefile.in
    A config/convert_dos_paths.sh
    M config/list_sarah_model_files.sh.in
    M configure
    M meta/TestSuite.m
    M templates/module.mk.in
    M test/module.mk

  Log Message:
  -----------
  Support Cygwin platform


  Commit: 44f653f4775658c07a055d977604284aa14accef
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/44f653f4775658c07a055d977604284aa14accef
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  Update ChangeLog


  Commit: 0cb9cbf9396d5f68849c751eaf135b456b30741b
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/0cb9cbf9396d5f68849c751eaf135b456b30741b
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M config/list_sarah_model_files.sh.in

  Log Message:
  -----------
  Avoid obsolete ToFileName[]


  Commit: 3fc4dec1b9e615fed3a0e8f01256df54164064e3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3fc4dec1b9e615fed3a0e8f01256df54164064e3
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M meta/TreeMasses.m

  Log Message:
  -----------
  export helper function operating on FSMassMatrix objects


  Commit: 6414e46028f8a0432397f18f348c7e5882f84502
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6414e46028f8a0432397f18f348c7e5882f84502
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/WriteOut.m
    M src/slha_io.hpp
    M templates/slha_io.cpp.in
    M test/test_slha_io.cpp

  Log Message:
  -----------
  convert symmetric fermion mixings to SLHA convention


  Commit: e3a126e3919680f7b26f25b649e4f8992ff9b59e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/e3a126e3919680f7b26f25b649e4f8992ff9b59e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M ChangeLog
    M config/Makefile.in
    A config/convert_dos_paths.sh
    M config/list_sarah_model_files.sh.in
    M configure
    M meta/TestSuite.m
    M templates/module.mk.in
    M test/module.mk
    M test/test_benchmark.cpp
    M test/test_slha_io.cpp
    M test/test_wrappers.cpp

  Log Message:
  -----------
  Merge branch 'feature-cygwin-support' into development


  Commit: c38f999d3f2518f6753f1e75bdf68fef0c566fa4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c38f999d3f2518f6753f1e75bdf68fef0c566fa4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M test/test_TreeMasses.m

  Log Message:
  -----------
  correcting TreeMasses test after commit 3fc4de


  Commit: 63245aefd3da2c5a2c59f3efe0f5caae251611ac
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/63245aefd3da2c5a2c59f3efe0f5caae251611ac
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M meta/WriteOut.m
    M src/slha_io.hpp
    M test/test_slha_io.cpp

  Log Message:
  -----------
  rename function and add comment on assumed mass matrix structure


  Commit: 4c345ca8b774b9c9fb26296edde55bffcf7f5171
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4c345ca8b774b9c9fb26296edde55bffcf7f5171
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-14 (Mon, 14 Jul 2014)

  Changed paths:
    M config/Makefile.in
    M configure

  Log Message:
  -----------
  adding preprocessor defines to the Makefile debug output


  Commit: 42f35b7a453c0bd88965c77691319411aac12091
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/42f35b7a453c0bd88965c77691319411aac12091
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M test/test_lowMSSM.sh

  Log Message:
  -----------
  add test debug output


  Commit: d81eb7fcf385af7b360b27acd1b020155fd79dd4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d81eb7fcf385af7b360b27acd1b020155fd79dd4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M model_files/E6SSM/LesHouches.in.E6SSM
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/UMSSM/LesHouches.in.UMSSM
    M model_files/lowMSSM/LesHouches.in.lowMSSM

  Log Message:
  -----------
  better comments on SMINPUTS entries


  Commit: 6759bd80b640088fc02ce86e9deccc01d7f5b7de
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6759bd80b640088fc02ce86e9deccc01d7f5b7de
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M src/slha_io.cpp

  Log Message:
  -----------
  properly recalculate MS-bar quark masses at low-scales

SLHA-2 defines mu, md, ms to be input in the MS-bar scheme at 2 GeV.
mc is input at mc in the MS-bar scheme.  Therefore, when we write out
the SMINPUTS block, we must not use the mf at MZ, but recalculate them
at the their input scale.


  Commit: 5d1d1376b02be7f30ad8ac246882b7e1b39e1dae
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/5d1d1376b02be7f30ad8ac246882b7e1b39e1dae
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M test/test_lowMSSM.sh

  Log Message:
  -----------
  Relax MSSM-lowMSSM test due to the varying 1st and 2nd Yukawa couplings

The 1st and 2nd generation quark Yukawa couplings are relatively
sensitive to the low-energy quark masses (SMINPUTS).  When the SG
recalculates these quark masses the result differs by up to 1.7 %
compared to the original input.  This deviation is transferred to the
SLHA input file for the lowMSSM, which results in a 1.7 % deviation of
the lowMSSM Yukawa couplings compared to the the MSSM Yukawa
couplings.

Here is the original test output:

Error: difference between test/MSSM.out.spc and test/lowMSSM.out.spc larger that 3.9e-4
----------------
@ Absolute error = 1.3395330000e-8, Relative error = 1.8307667013e-3
----------------
@ Absolute error = 8.6498900000e-6, Relative error = 2.5865757499e-3
----------------
@ Absolute error = 2.5681900000e-7, Relative error = 1.8229027535e-3
----------------
@ Absolute error = 5.6230100000e-6, Relative error = 1.8229098993e-3
----------------
@ Absolute error = 4.5528490000e-7, Relative error = 1.6560246730e-2
----------------
@ Absolute error = 9.4138860000e-5, Relative error = 1.6560291540e-2


  Commit: 6ad8025dd5b074d6e0ef918a9fbedc73304f0672
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6ad8025dd5b074d6e0ef918a9fbedc73304f0672
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M src/slha_io.hpp

  Log Message:
  -----------
  src/slha_io.hpp: extend a comment


  Commit: 22438aa1ee57e19bfe9dbfbf087caf2682ee7885
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/22438aa1ee57e19bfe9dbfbf087caf2682ee7885
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M meta/LatticeUtils.m

  Log Message:
  -----------
  expose useful helper function MajoranaMassMatrixQ


  Commit: c628a1d451a7912804a365bc4c6ce6c4ef5c8722
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c628a1d451a7912804a365bc4c6ce6c4ef5c8722
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M meta/WriteOut.m

  Log Message:
  -----------
  use cheaper MajoranaMassMatrixQ instead of checking symmetry explicitly


  Commit: 845512458242aa9c311f3faac90b64dc2309d67a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/845512458242aa9c311f3faac90b64dc2309d67a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M test/test_slha_io.cpp

  Log Message:
  -----------
  compare speed of two SLHA mixing matrix conversion implementations

On my machine convert_symmetric_fermion_mixings_to_slha_forloop() is
faster than
convert_symmetric_fermion_mixings_to_slha_rediagonalization() by
approximately a factor 2 .


  Commit: 9952f7de45d815ed19ecc3bd0a291e853bc3d286
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/9952f7de45d815ed19ecc3bd0a291e853bc3d286
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M test/test_slha_io.cpp

  Log Message:
  -----------
  test speed for a 4x4 mass matrix (as it appears in the MSSM)


  Commit: 79aaabbc925def8b3d0eea330017f9213e4314d4
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/79aaabbc925def8b3d0eea330017f9213e4314d4
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M test/test_slha_io.cpp

  Log Message:
  -----------
  remove unused variable


  Commit: 51fffa7ebd0f6c0317644a5d64f15f670a4f4ae0
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/51fffa7ebd0f6c0317644a5d64f15f670a4f4ae0
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/LatticeUtils.m
    M meta/TreeMasses.m
    M meta/WriteOut.m
    M src/slha_io.hpp
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M test/test_TreeMasses.m
    M test/test_slha_io.cpp

  Log Message:
  -----------
  Merge branch 'fix-slha-convention' into development


  Commit: ea66b92fb98b41e762cbea37ebdfc3d368a11e4c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/ea66b92fb98b41e762cbea37ebdfc3d368a11e4c
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M ChangeLog

  Log Message:
  -----------
  update ChangeLog


  Commit: 6379fc373ac548e310404a328155c8c6355eda80
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6379fc373ac548e310404a328155c8c6355eda80
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M config/module.mk

  Log Message:
  -----------
  config/module.mk: export convert_dos_paths.sh


  Commit: f1830f5f9438820c6d24a45f715787e592f9e277
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/f1830f5f9438820c6d24a45f715787e592f9e277
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M ChangeLog
    A model_files/TMSSM/FlexibleSUSY.m.in

  Log Message:
  -----------
  adding TMSSM model file


  Commit: 3be1572cc5caa2888ad74ec8f6e682d8daf0be3a
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/3be1572cc5caa2888ad74ec8f6e682d8daf0be3a
  Author: Expander <Hole.destructor at gmx.de>
  Date:   2014-07-15 (Tue, 15 Jul 2014)

  Changed paths:
    M ChangeLog
    M configure

  Log Message:
  -----------
  version 1.0.2


  Commit: c7cfe0819d0e548cf2a9c5721dccd51b516a0f47
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/c7cfe0819d0e548cf2a9c5721dccd51b516a0f47
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-16 (Wed, 16 Jul 2014)

  Changed paths:
    M .gitattributes
    M .gitignore
    M ChangeLog
    M README
    M TODO
    A config/Makefile.customized-betas.in
    M config/Makefile.in
    M config/config.h.in
    A config/convert_dos_paths.sh
    M config/list_sarah_model_files.sh.in
    M config/module.mk
    A config/references
    M configure
    M createmodel
    M doc/Doxyfile
    A doc/FlexibleFuture.txt
    M doc/chapters/usage.tex
    A doc/flexiblesusy-paper.tex
    M doc/mainpage.dox.in
    M doc/module.mk
    R doc/paper.tex
    M doc/release
    A examples/customized-betas/LesHouches.in.MSSMcbs
    A examples/customized-betas/MSSMcbs_initial_guesser.hpp
    A examples/customized-betas/MSSMcbs_low_scale_constraint.hpp
    A examples/customized-betas/MSSMcbs_model.hpp
    A examples/customized-betas/MSSMcbs_spectrum_generator.hpp
    A examples/customized-betas/MSSMcbs_two_scale_initial_guesser.cpp
    A examples/customized-betas/MSSMcbs_two_scale_initial_guesser.hpp
    A examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.cpp
    A examples/customized-betas/MSSMcbs_two_scale_low_scale_constraint.hpp
    A examples/customized-betas/MSSMcbs_two_scale_model.cpp
    A examples/customized-betas/MSSMcbs_two_scale_model.hpp
    A examples/customized-betas/custombetas.cpp
    A examples/customized-betas/run_example.sh
    M examples/module.mk
    M examples/tower/MSSM_MSSMRHN_spectrum_generator.hpp
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.cpp
    M examples/tower/MSSM_MSSMRHN_two_scale_initial_guesser.hpp
    A install-sarah
    M meta/AnomalousDimension.m
    M meta/BetaFunction.m
    M meta/EWSB.m
    M meta/FlexibleSUSY.m
    M meta/LatticeUtils.m
    M meta/SelfEnergies.m
    M meta/TestSuite.m
    M meta/TreeMasses.m
    M meta/Vertices.m
    M meta/WeinbergAngle.m
    M meta/WriteOut.m
    M model_files/E6SSM/FlexibleSUSY.m.in
    A model_files/E6SSM/LesHouches.in.E6SSM
    M model_files/FlexibleSUSY.m.in
    M model_files/InertMSSM/FlexibleSUSY.m.in
    M model_files/LHInputMSSM/FlexibleSUSY.m.in
    M model_files/MRSSM/FlexibleSUSY.m.in
    M model_files/MSSM/FlexibleSUSY.m.in
    M model_files/MSSM/LesHouches.in.MSSM
    M model_files/MSSMCPV/FlexibleSUSY.m.in
    M model_files/MSSMNoFV/FlexibleSUSY.m.in
    M model_files/MSSMRHN/FlexibleSUSY.m.in
    M model_files/NMSSM/FlexibleSUSY.m.in
    M model_files/NMSSM/LesHouches.in.NMSSM
    M model_files/NUHMSSM/FlexibleSUSY.m.in
    M model_files/NUHMSSM/LesHouches.in.NUHMSSM
    M model_files/NoYukawaMSSM/FlexibleSUSY.m.in
    M model_files/SMSSM/FlexibleSUSY.m.in
    A model_files/TMSSM/FlexibleSUSY.m.in
    M model_files/UMSSM/FlexibleSUSY.m.in
    A model_files/UMSSM/LesHouches.in.UMSSM
    M model_files/YukawaCMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/FlexibleSUSY.m.in
    M model_files/lowMSSM/LesHouches.in.lowMSSM
    M model_files/minMSSM/FlexibleSUSY.m.in
    M model_files/rootMSSM/FlexibleSUSY.m.in
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyMSSM/SoftsusyMSSM_two_scale_convergence_tester.hpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.cpp
    M models/SoftsusyNMSSM/SoftsusyNMSSM_two_scale_convergence_tester.hpp
    M models/smcw/smcw_two_scale_convergence_tester.cpp
    M models/smcw/smcw_two_scale_convergence_tester.hpp
    M sarah/E6SSM/E6SSM.m
    M sarah/E6SSM/parameters.m
    M sarah/E6SSM/particles.m
    R sarah/E6SSMnew/E6SSMnew.m
    R sarah/E6SSMnew/parameters.m
    R sarah/E6SSMnew/particles.m
    R sarah/myE6SSM/myE6SSM.m
    R sarah/myE6SSM/parameters.m
    R sarah/myE6SSM/particles.m
    M src/betafunction.cpp
    M src/betafunction.hpp
    M src/build_info.cpp
    A src/composite_convergence_tester.hpp
    A src/convergence_tester_drbar.hpp
    M src/error.hpp
    M src/gsl_utils.cpp
    M src/logger.hpp
    M src/module.mk
    M src/root_finder.hpp
    M src/scan.cpp
    M src/scan.hpp
    M src/sfermions.cpp
    M src/sfermions.hpp
    M src/slha_io.cpp
    M src/slha_io.hpp
    M src/two_scale_composite_convergence_tester.cpp
    M src/two_scale_composite_convergence_tester.hpp
    A src/two_scale_convergence_tester_drbar.hpp
    R src/two_scale_convergence_tester_skeleton.hpp
    M src/two_scale_solver.cpp
    M src/two_scale_solver.hpp
    M src/wrappers.hpp
    M templates/info.cpp.in
    M templates/low_scale_spectrum_generator.hpp.in
    M templates/module.mk.in
    M templates/plot_spectrum.gnuplot.in
    M templates/run.cpp.in
    M templates/slha_io.cpp.in
    M templates/slha_io.hpp.in
    M templates/spectrum_generator.hpp.in
    M templates/start.m.in
    M templates/two_scale_convergence_tester.cpp.in
    M templates/two_scale_convergence_tester.hpp.in
    M templates/two_scale_high_scale_constraint.cpp.in
    M templates/two_scale_high_scale_constraint.hpp.in
    M templates/two_scale_initial_guesser.cpp.in
    M templates/two_scale_initial_guesser.hpp.in
    M templates/two_scale_initial_guesser_low_scale_model.cpp.in
    M templates/two_scale_initial_guesser_low_scale_model.hpp.in
    M templates/two_scale_low_scale_constraint.cpp.in
    M templates/two_scale_low_scale_constraint.hpp.in
    M templates/two_scale_model.cpp.in
    M templates/two_scale_model.hpp.in
    M templates/two_scale_susy_parameters.cpp.in
    M templates/two_scale_susy_parameters.hpp.in
    M templates/two_scale_susy_scale_constraint.cpp.in
    M templates/two_scale_susy_scale_constraint.hpp.in
    M test/module.mk
    M test/stopwatch.cpp
    A test/test.sh
    M test/test_MSSM.hpp
    M test/test_MSSM_higgs_iteration.cpp
    M test/test_MSSM_high_scale_constraint.cpp
    M test/test_MSSM_initial_guesser.cpp
    M test/test_MSSM_model.cpp
    M test/test_MSSM_slha_input.cpp
    M test/test_MSSM_slha_output.cpp
    M test/test_MSSM_spectrum.cpp
    M test/test_MSSM_susy_scale_constraint.cpp
    M test/test_NMSSM.hpp
    M test/test_NMSSM_ewsb.cpp
    M test/test_NMSSM_initial_guesser.cpp
    M test/test_NMSSM_low_scale_constraint.cpp
    M test/test_NMSSM_one_loop_spectrum.cpp
    M test/test_NMSSM_self_energies.cpp
    M test/test_NMSSM_spectrum.cpp
    M test/test_NMSSM_tree_level_spectrum.cpp
    M test/test_SMSSM.hpp
    M test/test_SMSSM_ewsb.cpp
    M test/test_SMSSM_one_loop_spectrum.cpp
    M test/test_SMSSM_tree_level_spectrum.cpp
    M test/test_TreeMasses.m
    M test/test_benchmark.cpp
    A test/test_goldstones.cpp
    M test/test_lowMSSM.sh
    M test/test_root_finder.cpp
    A test/test_run_examples.sh
    M test/test_sfermions.cpp
    M test/test_slha_io.cpp
    R test/test_tower.sh
    M test/test_wrappers.cpp

  Log Message:
  -----------
  Merge branch 'development' into lattice


  Commit: 4de789500195290ae35da49321d6fc5c4e2936b2
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/4de789500195290ae35da49321d6fc5c4e2936b2
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-17 (Thu, 17 Jul 2014)

  Changed paths:
    M meta/FlexibleSUSY.m
    M meta/Lattice.m
    M src/lattice_solver.cpp
    M templates/module.mk.in

  Log Message:
  -----------
  Adapt lattice code to changes in development branch


  Commit: 892d80f553c750da9fc00d7673ee6c26ecd3156e
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/892d80f553c750da9fc00d7673ee6c26ecd3156e
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-18 (Fri, 18 Jul 2014)

  Changed paths:
    M meta/Lattice.m
    M meta/LatticeUtils.m

  Log Message:
  -----------
  Time individual steps of beta derivative translation


  Commit: 7d2891894e94679a27eb05574322599a697f013c
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/7d2891894e94679a27eb05574322599a697f013c
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-18 (Fri, 18 Jul 2014)

  Changed paths:
    M meta/Lattice.m

  Log Message:
  -----------
  meta/Lattice.m: fix a typo


  Commit: 1a99ca4a357f9a1538fcf492f1caba2969d3c5f3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/1a99ca4a357f9a1538fcf492f1caba2969d3c5f3
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-18 (Fri, 18 Jul 2014)

  Changed paths:
    M meta/Lattice.m

  Log Message:
  -----------
  meta/Lattice.m: use a more robust reality test


  Commit: 6e44aeda40855a2d54e4622740e65b9365566fdb
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/6e44aeda40855a2d54e4622740e65b9365566fdb
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-18 (Fri, 18 Jul 2014)

  Changed paths:
    M meta/Lattice.m

  Log Message:
  -----------
  meta/Lattice.m: strip \[] around special characters from CForm string


  Commit: 21530a86eca0cd63375663a2191208cf7f8d2371
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/21530a86eca0cd63375663a2191208cf7f8d2371
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-18 (Fri, 18 Jul 2014)

  Changed paths:
    M meta/Lattice.m

  Log Message:
  -----------
  meta/Lattice.m: introduce SimplifyParametrization[]

to play with different simplification functions.


  Commit: 404e61178d42135af9f9371d4b5caa50b62a00c3
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/404e61178d42135af9f9371d4b5caa50b62a00c3
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-18 (Fri, 18 Jul 2014)

  Changed paths:
    M meta/Lattice.m

  Log Message:
  -----------
  meta/Lattice.m: replace innermost SUM by USUM


  Commit: d5740ae97a1b7d21d5f271860cc8d04b75eecd48
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/d5740ae97a1b7d21d5f271860cc8d04b75eecd48
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-24 (Thu, 24 Jul 2014)

  Changed paths:
    M models/fmssm/fmssm_lattice_constraints.hpp
    M models/fmssmn/fmssmn_lattice_constraints.hpp
    M src/lattice_constraint.cpp
    M src/lattice_constraint.hpp
    M src/lattice_foreign_constraint.hpp
    M src/lattice_numerical_constraint.cpp
    M src/lattice_numerical_constraint.hpp
    M src/lattice_solver.cpp
    M src/lattice_solver.hpp

  Log Message:
  -----------
  Move x-buffer management from foreign constraints to RGFlow<Lattice>

to avoid duplicate x-buffers allocated by ForeignConstraint or
ForeignMatching.


  Commit: a628b699bce803fca1f62bde9752181562ab9a41
      https://github.com/FlexibleSUSY/FlexibleSUSY/commit/a628b699bce803fca1f62bde9752181562ab9a41
  Author: Jae-hyeon Park <jhyeon at gmail.com>
  Date:   2014-07-24 (Thu, 24 Jul 2014)

  Changed paths:
    M src/lattice_compound_constraint.hpp
    M src/lattice_constraint.cpp
    M src/lattice_foreign_constraint.hpp
    M src/lattice_model.cpp
    M src/lattice_numerical_constraint.cpp
    M src/lattice_numerical_constraint.hpp
    M src/lattice_solver.cpp

  Log Message:
  -----------
  Add copyright notices


Compare: https://github.com/FlexibleSUSY/FlexibleSUSY/compare/ea990e0b1f3b...a628b699bce8


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